LOCUS       NZ_MH785225             1475 bp    DNA     circular CON 21-JUL-2023
DEFINITION  Staphylococcus aureus strain ch25 plasmid pAvY-B2, complete
            sequence.
ACCESSION   NZ_MH785225
VERSION     NZ_MH785225.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN09846911
KEYWORDS    RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus.
REFERENCE   1  (bases 1 to 1475)
  AUTHORS   Bukowski,M., Piwowarczyk,R., Madry,A., Zagorski-Przybylo,R.,
            Hydzik,M. and Wladyka,B.
  TITLE     Prevalence of Antibiotic and Heavy Metal Resistance Determinants and
            Virulence-Related Genetic Elements in Plasmids of Staphylococcus
            aureus
  JOURNAL   Front Microbiol 10, 805 (2019)
  REMARK    DOI: 10.3389/fmicb.2019.00805
REFERENCE   2  (bases 1 to 1475)
  AUTHORS   Bukowski,M., Hydzik,M., Sabat,A.J. and Wladyka,B.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-AUG-2018) Faculty of Biochemistry, Biophysics and
            Biotechnology, Department of Analytical Biochemistry, Jagiellonian
            University, Gronostajowa 7, Krakow, malopolskie 30-387, Poland
COMMENT     ##Genome-Annotation-Data-START##
            Annotation Provider          :: NCBI RefSeq
            Annotation Date              :: 07/21/2023 01:07:20
            Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline
            (PGAP)
            Annotation Method :: Best-placed reference protein set; GeneMarkS-2+
            Annotation Software revision :: 6.5
            Features Annotated           :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                :: 1
            CDSs (total)                 :: 1
            Genes (coding)               :: 1
            CDSs (with protein)          :: 1
            Genes (RNA)                  :: 0
            tRNAs                        :: 0
            ncRNAs                       :: 0
            Pseudo Genes (total)         :: 0
            CDSs (without protein)       :: 0
            ##Genome-Annotation-Data-END##
            REFSEQ INFORMATION: The reference sequence is identical to
            MH785225.1.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1475
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /strain="ch25"
                     /isolation_source="liver"
                     /host="Broiler chicken"
                     /db_xref="taxon:1280"
                     /plasmid="pAvY-B2"
                     /geo_loc_name="Poland: Wroclaw"
                     /collection_date="2008"
     gene            302..1204
                     /locus_tag="D0Y78_RS00005"
                     /old_locus_tag="D0Y78_d00000"
     CDS             302..1204
                     /locus_tag="D0Y78_RS00005"
                     /old_locus_tag="D0Y78_d00000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000532202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WP_254231376.1"
                     /translation="MIYLEDEKTILDFHQKMTGGKLVVYLTYDQLNAQNSPLFDSYDIK
                     VKAYGSGIYKLLRYKNPRKKSNTNFTTLTHCRDYLNMSDKEKQKILEESRKSHLFEVKN
                     LIKDYILCNDFDMFWTLTFDPKRCVEAIEDEYRFKEFGKWLQKMRMRHKRKSDKPFNYI
                     AIPERHKSGQIHWHMVTGNLDPNLVDSGKTFRNQKIYNCTDWEHGFTNVQKMRSKSKVS
                     SYVTKYITKGLLYSPVRKHKKKYFCSKGLALPEVYAGTFEELKYILPVCDKYGALNPSH
                     SNDVCDIWLFKAGVNWEKA"
                     /name="hypothetical protein"
ORIGIN
        1 agcaagcacc aatagaaagg catatagccc aaaggttcca tgtccaaaag gaaattggaa
       61 taaataaaaa aagcacgtgc actagtctgg atagaccgta cacgcgctaa atgctattat
      121 atagctaaac caaataaaaa gagctacaac acccagcgac caaactttgt gttgtaacga
      181 atacgtttgt tagtttgtat attactttag caagtgaaaa aaatcaagct aacaaatttg
      241 gatgtgttgt aactcttttt caaaactgga aaggggtttt tttattatga gtagaccgaa
      301 aatgatttat ttggaagacg aaaaaactat cttggatttt caccaaaaaa tgacgggagg
      361 gaagttggtc gtctacttga catacgacca acttaacgca caaaattcac ccctttttga
      421 ctcttatgat attaaggtca aagcttatgg tagcggcatt tataagcttt tgcgttacaa
      481 aaatccgcga aaaaaatcta acacaaattt tactacttta acgcactgta gagattactt
      541 aaatatgagt gataaagaaa agcaaaaaat tttagaagaa agccgaaaaa gtcatctttt
      601 tgaagttaaa aatttgataa aggattatat tttgtgtaat gacttcgata tgttttggac
      661 actaacattt gatccaaaaa gatgtgttga agctatcgag gatgaatata gatttaagga
      721 gtttgggaag tggcttcaaa aaatgaggat gagacataag cgtaaaagtg ataagccatt
      781 taactatata gcgatacctg agcgtcataa aagcgggcaa atacattggc atatggttac
      841 ggggaattta gaccctaatc tggttgatag cggaaaaact tttaggaatc aaaagattta
      901 taactgtact gactgggaac atggatttac gaatgttcaa aaaatgcggt cgaaatcaaa
      961 ggtaagtagt tatgtgacta aatacattac caaaggcttg ctgtatagtc ctgttagaaa
     1021 gcacaagaag aaatattttt gtagcaaggg cttagcatta cctgaggtat acgctggtac
     1081 ttttgaagag cttaaataca ttttgcctgt gtgtgataag tatggtgcat taaatccatc
     1141 gcatagcaat gatgtgtgtg atatttggct gtttaaggct ggggtgaatt gggagaaagc
     1201 gtaacacgtt agaagcgttg tctgagggtg tcaatggaat tggcaaggcg gagccgtccc
     1261 agcagggcgg tcagacgagc gtataacgtg tttaggcgaa gcctaatagc cagagggtac
     1321 attttgtctg taaaaatgcg tatagcgcgt atatgagcgt ttaaatggca aatagaggca
     1381 ttctcattta tgccgagaaa acttttgata tggaaaaggg ctatatgcta tagcgtaagc
     1441 taatattggt gagtgattga attgggatta gacca
//
