LOCUS       NZ_MH423313             2473 bp    DNA     linear   CON 21-JUL-2023
DEFINITION  Staphylococcus hominis strain Sho-115Lar plasmid pSho-115Lar,
            complete sequence.
ACCESSION   NZ_MH423313
VERSION     NZ_MH423313.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN14228146
KEYWORDS    RefSeq.
SOURCE      Staphylococcus hominis
  ORGANISM  Staphylococcus hominis
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus.
REFERENCE   1  (bases 1 to 2473)
  AUTHORS   Papagiannitsis,C.C. and Petinaki,E.
  TITLE     Characterization of erythromycin-resistant staphylococci of Greek
            origin
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2473)
  AUTHORS   Papagiannitsis,C.C. and Petinaki,E.
  TITLE     Direct Submission
  JOURNAL   Submitted (01-JUN-2018) Microbiology, University Hospital of
            Larissa, Panepistimou 3, Larissa, Larissa 41500, Greece
COMMENT     ##Genome-Annotation-Data-START##
            Annotation Provider          :: NCBI RefSeq
            Annotation Date              :: 07/21/2023 01:08:12
            Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline
            (PGAP)
            Annotation Method :: Best-placed reference protein set; GeneMarkS-2+
            Annotation Software revision :: 6.5
            Features Annotated           :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                :: 3
            CDSs (total)                 :: 3
            Genes (coding)               :: 3
            CDSs (with protein)          :: 3
            Genes (RNA)                  :: 0
            tRNAs                        :: 0
            ncRNAs                       :: 0
            Pseudo Genes (total)         :: 0
            CDSs (without protein)       :: 0
            ##Genome-Annotation-Data-END##
            REFSEQ INFORMATION: The reference sequence is identical to
            MH423313.1.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2473
                     /organism="Staphylococcus hominis"
                     /mol_type="genomic DNA"
                     /strain="Sho-115Lar"
                     /isolation_source="Milk sample from subclinical mastitis in
                     ewes"
                     /db_xref="taxon:1290"
                     /plasmid="pSho-115Lar"
                     /geo_loc_name="Greece"
     gene            complement(473..949)
                     /locus_tag="HTS29_RS00005"
     CDS             complement(473..949)
                     /locus_tag="HTS29_RS00005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000664727.1"
                     /GO_process="GO:0006260 - DNA replication [Evidence IEA];
                     GO:0006276 - plasmid maintenance [Evidence IEA]"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication/maintenance protein RepL"
                     /protein_id="WP_000664727.1"
                     /translation="MKERYGTVYKGSQRLIDEESGEVIEVDKLYRKQTSGNFVKAYIVQ
                     LISMLDMIGGKKLKIVNYILDNVHLSNNTMIATTREIAKATGTSLQTVITTLKILEEGN
                     IIKRKTGVLMLNPELLMRGDDQKQKYLLLEFGNFEQEANEKQENALSDYYSFKD"
                     /name="replication/maintenance protein RepL"
     gene            complement(1397..2131)
                     /gene="erm(C)"
                     /locus_tag="HTS29_RS00010"
     ARG             complement(1401..2131)
                     /name="erm(C)"
                     /gene="erm(C)"
                     /gene_name="23S rRNA (adenine(2058)-N(6))-methyltransferase
                     Erm(C)"
                     /tool="amrfinderplus"
                     /drug_class="LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN"
                     /identity="100.0"
                     /coverage="100.0"
     gene            complement(2192..2251)
                     /gene="ermCL"
                     /locus_tag="HTS29_RS00015"
     CDS             complement(2192..2251)
                     /gene="ermCL"
                     /locus_tag="HTS29_RS00015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002497446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA methylase leader peptide ErmCL"
                     /protein_id="WP_002497446.1"
                     /translation="MGIFSIFVISTVHYQPNKK"
                     /name="ermCL"
     ARG             complement(1398..2131)
                     /name="ErmC"
                     /gene="ErmC"
                     /gene_name="Erm 23S ribosomal RNA methyltransferase"
                     /tool="rgi"
                     /drug_class="macrolide antibiotic; lincosamide antibiotic;
                     streptogramin antibiotic; streptogramin A antibiotic;
                     streptogramin B antibiotic"
                     /identity="99.59"
                     /coverage="100.0"
     Typing          complement(464..949)
                     /name="rep_cluster_1947"
                     /typing="replicon"
                     /tool="MOB-suite"
                     /identity="99.591"
                     /coverage="100.0"
                     /evalue="0.0"
ORIGIN
        1 ataagtctag tgtgttagac tttaatgttt ttttaaggca ttagtgcatt taagcgtcag
       61 agcatggctt tatgccgaga aaactattgg ttggaatggc gtgtgtgtta gccaaagctt
      121 tggcgagttg gttgggggtt tcatgggatt aatcccatga aagtaccaac tcaacaacac
      181 actaacgcct gttggttcca accaatagga aattggaata agcaattagt ataatgagag
      241 tataatgttg gtataacgtt agtataatga tgcttttttt cattatattt tttatgtact
      301 ttaaacctgc acgcttatgt gaattagaaa aagcttaatc gcatttcata gattgacctc
      361 ccaataacac cacgtagtta ttgggaggtc aatctatttc atttgcgtta agcttttgat
      421 ctacattaag cgtgcaggtt ttttgtctat ttgtagacga ttttatgtta tactagtcct
      481 tgaaagaata ataatcagat aatgcatttt cttgtttttc atttgcctct tgctcaaagt
      541 tcccaaattc gagtaagagg tatttttgtt tttggtcgtc gcctctcatt agtagttcag
      601 ggtttaacat taatactcca gtttttcttt ttataatatt tccttcttct aagattttaa
      661 gtgttgttat tactgtttgt agacttgttc ctgtagcttt tgctatttct cttgttgtag
      721 ctatcattgt attgttactt aagtggacat tatctaggat atagttaacg attttaagtt
      781 tttttccgcc aatcatatct aacatactta ttaattgcac tatatatgcc tttacgaagt
      841 taccagacgt ttgtttacgg tataacttgt ctacctctat gacttctcca ctttcttcgt
      901 ctatgagcct ctgagagcct ttatagactg ttccatatct ttctttcatc tttttctcac
      961 tccttatttt aaactattct aactatatca taactgttct aaaaaaaaaa gaacatttgt
     1021 taaaagaaat tagaacaaaa tgagtgaaaa attagaacaa acaaattcct tataaacctt
     1081 atcatctcaa cctatattaa gattttacct agttgaatct tcttttctat ataaagcgtc
     1141 ggagcatatc agggggttat ctaacgtaaa tgctaccctt cggctcgctt tcgctcggca
     1201 ttgacgtcag atactgcacc ccctgaaccc ccatgctcca acagcaaaaa ggaaactttt
     1261 tgctgctttt ccgacgctta ttcgcttcgc tcatatttat atagaaaaga agtgaatgcg
     1321 caaaagacat aatcgattca caaaaaatag gtacacgaaa aacaagttaa gggatgcagt
     1381 ttatgcatcc cttaacttac ttattaaata atttatagct attgaaaaga gataagaatt
     1441 gttcaaagct aatattgttt aaatcgtcaa ttcctgcatg ttttaaggaa ttgttaaatt
     1501 gattttttgt aaatattttc ttgtattctt tgttaaccca tttcataacg aaataattat
     1561 acttctgttt atctttgtgt gatattcttg atttttttct atttaatctg ataagtgagc
     1621 tattcacttt aggtttagga tgaaaatatt ctcttggaac catacttaat atagaaatat
     1681 caacttctgc cattaaaaat aatgccaatg agcgttttgt atttaataat cttttagcaa
     1741 acccgtattc cacgattaaa taaatctcat cagctatact atcaaaaaca attttgcgta
     1801 ttatatccgt acttatgtta taaggtatat taccaaatat tttataggat tggtttttag
     1861 gaaatttaaa ctgcaatata tccttgttta aaacttggaa attatcgtga tcaacaagtt
     1921 tattttctgt agttttgcat aatttatggt ctatttcaat ggcagttacg aaattacacc
     1981 tctgtactaa ttcaagggta aaatgccctt ttcctgagcc gatttcaaag atattatcat
     2041 gttcatttaa tcttatattt gtcattattt tatctatatt atgttttgaa gtaataaagt
     2101 tttgactgtg ttttatattt ttctcgttca ttataaccct ctttaatttg gttataatga
     2161 attttgctta ttaacgattc attataacca cttatttttt gtttggttga taatgaactg
     2221 tgctgattac aaaaatacta aaaatgccca tattttttcc tccttataaa attagtataa
     2281 ttatagcacg agctctgata aatatgaaca tgatgagtga tcgttaaatt tatactgcaa
     2341 tctgatgcga ttattgaata aaagatatga gagatttatc tagtttcttt ttttacaaga
     2401 aaaaagaaag ttcttaaagg ttttatactt ttggtcgtag agcacacggt ttaacgactt
     2461 aattacgaag taa
//
