LOCUS       NZ_LR890497             3012 bp    DNA     circular CON 18-JUN-2023
DEFINITION  Klebsiella pneumoniae strain INF018 isolate INF018 plasmid 5,
            complete sequence.
ACCESSION   NZ_LR890497
VERSION     NZ_LR890497.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA3356961
            Assembly: GCF_904865825.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Klebsiella/Raoultella group; Klebsiella.
REFERENCE   1
  AUTHORS   Hawkey,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-OCT-2020) THE UNIVERSITY OF MELBOURNE, 30 Flemington
            Rd, Australia
COMMENT     ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Date                   :: 06/18/2023 11:16:39
            Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline
            (PGAP)
            Annotation Method :: Best-placed reference protein set; GeneMarkS-2+
            Annotation Software revision      :: 6.5
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,096
            CDSs (total)                      :: 4,978
            Genes (coding)                    :: 4,878
            CDSs (with protein)               :: 4,878
            Genes (RNA)                       :: 118
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 84
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 38 of 100
            Pseudo Genes (incomplete)         :: 59 of 100
            Pseudo Genes (internal stop)      :: 18 of 100
            Pseudo Genes (multiple problems)  :: 14 of 100
            ##Genome-Annotation-Data-END##
            REFSEQ INFORMATION: The reference sequence is identical to
            LR890497.1.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..3012
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="INF018"
                     /isolate="INF018"
                     /isolation_source="urine"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /plasmid="5"
                     /geo_loc_name="Australia"
                     /collection_date="2013-04"
     gene            78..674
                     /locus_tag="JMV82_RS25370"
     CDS             78..674
                     /locus_tag="JMV82_RS25370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013641249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="WP_099743376.1"
                     /translation="MTRSTTSPDLGTPAKHKPGQWVQTERKAHEAWAHLIARKPRAAEL
                     LHHLVAQMGHQNAVVVSQKTLAQITGRSVDTVKRALRDLVAERWVSVVKLNGPGTVNAY
                     VVNDRVAWGQPRDQLRLSVFSATVIADFGDQEEALLGHADLRRIPTLYPGELQLPTGPG
                     EDPPNQPPIPGLEPDLPALSETEQLEQRGQQRLLE"
                     /name="helix-turn-helix domain-containing protein"
     gene            complement(870..2177)
                     /gene="mobV"
                     /locus_tag="JMV82_RS25375"
     CDS             complement(870..2177)
                     /gene="mobV"
                     /locus_tag="JMV82_RS25375"
                     /inference="COORDINATES: protein motif:HMM:NF013258.2"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006310 - DNA recombination [Evidence IEA]"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MobV family relaxase"
                     /protein_id="WP_198406753.1"
                     /translation="MPAHFAILRTAKLKSLGNVGGSLAHTYRTRETSNADPSRADQNEH
                     SHATPGEVMQALRDKLPEKRRKDAVIGLEYFVGGSPEWFEGKNREQQDAYFREAVGWLE
                     KRHGKENVVGWSIHRDESTPHLVAYVVPLDDKGKLNAKQWTGGPAALSKMQTDFAKTVG
                     ARHGLERGIEGSKAHHQTIKDFYAQIEKPGQHVTISPETAQPKVLKKGFLTNEYETPEM
                     VAERLTAAVQKAYTPAVEAAKLAASERRRADEMTQTAQTLSREKKEAQERLQALQKHLA
                     PVLELATLAKQEFVQLVMHAQERVKAIKAEREKAAEREKLDQERQRRVDDLVRVERKTA
                     GASCTFAQHALEAIQKAGGDASKVHWPTVEKAAVMESITQHRQQPKDVLAAIVKYSPGM
                     VEPARQEQARAFISTLAGKEIAAPKVGKQHDGPSLG"
                     /name="mobV"
ORIGIN
        1 gataatcttg cttgattttc acgcaagatt gccggatttg atcgacgtct tgccctaccc
       61 ctagtgcagg agtccgcatg acacgctcga ccacatcccc agacttgggc accccggcca
      121 aacacaagcc cggccagtgg gtgcagaccg aacgcaaggc ccatgaggcg tgggcgcacc
      181 tgatagcccg caagccccgc gccgccgagc ttctgcacca tctggtggcg cagatgggcc
      241 accagaacgc cgtggtggtc agccaaaaga cgctggccca gatcacgggc cggagcgtgg
      301 acacggtgaa acgcgccctc cgcgatctgg tggccgagcg ctgggtttct gtcgtgaagc
      361 tcaacggccc cggcacggtg aacgcctacg tggtcaatga ccgcgtggcg tggggccagc
      421 cccgcgacca gttgcgcctg tcggtgttct cggccacggt cattgccgac ttcggcgacc
      481 aagaggaggc gctactcggc cacgccgact tgcgccgcat cccgaccctg taccccggcg
      541 agctacaact gccgaccggc cccggcgaag atccaccgaa ccagcccccc attcccggac
      601 tggagccaga cctgcccgcc ctgtccgaaa ccgagcagct tgagcagcgc ggccagcaga
      661 ggctgctgga gtagcccccg gcagggcgcg agtgtttcct gccaaggaaa cacgtattcg
      721 cgcatccatc ccccgcaggg ggtcggatgg cctgccgggc acgcacgtaa tccacccctc
      781 ggggggatta ctctcagtgc gcccttcgcc tgccttgccg acgcacggga cattcgcgca
      841 gcggatgtcg taagtgcgcc cttcgggact cagcccagcg acggcccgtc gtgctgcttg
      901 cccaccttcg gggccgctat ctccttcccg gccagcgtcg aaatgaaggc ccgcgcctgc
      961 tcctgccgtg ctggctcgac catccccggc gagtacttca cgatggccgc gagcacgtcc
     1021 ttgggctgct gccggtgctg tgtgatcgac tccatgacgg ctgctttctc gaccgtgggc
     1081 caatgcacct tggaggcgtc cccgcccgcc ttctggattg cttccaaggc gtgctgcgcg
     1141 aacgtgcagg acgctcccgc cgtcttgcgc tccacgcgca ccaggtcatc cacccggcgc
     1201 tgtcgttcct ggtcgagctt ttcccgctcg gcggccttct cccgctccgc tttgatggcc
     1261 ttgacccgct cctgagcgtg catgacgagc tggacgaact cctgcttggc cagcgtcgcc
     1321 agctccaaga ccggcgcaag gtgcttttgc agggcctgca agcgctcctg agcctctttt
     1381 ttctcccggc tgagggtttg ggccgtctgg gtcatttcgt cggctctgcg gcgctctgag
     1441 gcggccagct tggcggcttc gacggctggg gtgtacgcct tttgcactgc ggccgtcagg
     1501 cgctcggcga ccatctccgg cgtctcgtac tcgttggtca gaaacccctt cttgagcacc
     1561 ttgggctggg ccgtctccgg gctgatggtg acgtgctggc ccggcttctc gatctgggcg
     1621 tagaagtcct tgatggtctg gtggtgcgcc ttgctgccct cgatgccgcg ttccagaccg
     1681 tggcgagcgc cgacggtctt ggcgaagtcg gtttgcatct tggacagggc ggcggggcca
     1741 cccgtccatt gcttggcgtt gagcttcccc ttgtcgtcga gcggcaccac gtaggccacc
     1801 agatggggcg tgctctcgtc ccggtggatc gaccagccga ccacgttttc cttgccgtgg
     1861 cgcttctcaa gccagcccac cgcctcgcgg aaataggcgt cctgctgctc gcggttcttg
     1921 ccctcgaacc actccgggga gccgccgacg aagtattcca gcccgatgac cgcatccttg
     1981 cgccgcttct ccgggagctt gtcgcgcagg gcctgcatga cctcgcccgg ggtggcgtgg
     2041 ctgtgctcgt tctggtcggc ccggctgggg tcggcgttgc tggtctcgcg cgtccggtag
     2101 gtgtgcgcca gcgacccacc gacgttgcca agcgacttga gtttggcggt gcgcaggatg
     2161 gcgaagtgtg cgggcatggg gatgtctccg aggtggcagc ggcagcggct ttgcagacaa
     2221 agtgtactca ctatactttg ctgacgcaaa gtagtgcccg cctgcggcgg ctgcggcggg
     2281 cttcgccctt gcccagaggg ggcgctgccc cctctggact cccggcccgt ggatatgtgg
     2341 acgatggcct gcggccaccg gctggctcgc ttcgctcggc ccgtggacaa ccctgatgga
     2401 cggcccgtgg acaggctgcg cctgcccacc gcccgcccac agggattgcc caccggctgc
     2461 ccagccttcg tccacatacc caccggcccc tgcgcggcct gcggccttgc ccatcgatca
     2521 attttgaaaa tttctctcca aaccccctcc ggcctgcgcg ctgcgcttgc cgggtgcggc
     2581 ggacgggtca aggggttggt gcggcccgca gcccgcaggg cgaggactcg gccccttgac
     2641 gcggccagag cgcccacagc ctcagccgtg gagcagagga agggcgtagc ccgccccctg
     2701 ctcccgcggc gtatggggca agaccccatg cgggagtcca gcccgaaggg ggctggtcaa
     2761 gcccgcaggg cgcgaagggg ggggacagag cgcccccctc tggggggcac ttagaccggg
     2821 agggggagcc ggcgaagccg ggggaacccc ggaggggtgc ccttctctgg gaaccagaga
     2881 actagatata ggccgatttt caaagtcctt tgaaatcaat gacttacgcc gggggggtag
     2941 tgcagcagct ttgcacgggg ggtagtgcag cagctttgca ctaggttgct tgaaaaccaa
     3001 gccagcttgc gc
//
