LOCUS       NZ_LR890489             1916 bp    DNA     circular CON 18-JUN-2023
DEFINITION  Klebsiella pneumoniae strain KSB2_10B isolate KSB2_10B plasmid 6,
            complete sequence.
ACCESSION   NZ_LR890489
VERSION     NZ_LR890489.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA3357419
            Assembly: GCF_904865795.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Klebsiella/Raoultella group; Klebsiella.
REFERENCE   1
  AUTHORS   Hawkey,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-OCT-2020) THE UNIVERSITY OF MELBOURNE, 30 Flemington
            Rd, Australia
COMMENT     ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Date                   :: 06/18/2023 15:46:44
            Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline
            (PGAP)
            Annotation Method :: Best-placed reference protein set; GeneMarkS-2+
            Annotation Software revision      :: 6.5
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,387
            CDSs (total)                      :: 5,269
            Genes (coding)                    :: 5,137
            CDSs (with protein)               :: 5,137
            Genes (RNA)                       :: 118
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 84
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 132
            CDSs (without protein)            :: 132
            Pseudo Genes (ambiguous residues) :: 0 of 132
            Pseudo Genes (frameshifted)       :: 53 of 132
            Pseudo Genes (incomplete)         :: 82 of 132
            Pseudo Genes (internal stop)      :: 21 of 132
            Pseudo Genes (multiple problems)  :: 21 of 132
            ##Genome-Annotation-Data-END##
            REFSEQ INFORMATION: The reference sequence is identical to
            LR890489.1.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1916
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="KSB2_10B"
                     /isolate="KSB2_10B"
                     /isolation_source="rectal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /plasmid="6"
                     /geo_loc_name="Australia"
                     /collection_date="2014-03"
     gene            521..757
                     /locus_tag="JMX01_RS26810"
     CDS             521..757
                     /locus_tag="JMX01_RS26810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001676031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WP_012772745.1"
                     /translation="MARLTNLTPAEKKFLDDAVAAAERASGKKLNQPNRHIVLNRARAQ
                     IELQRYADRQRALREDERQQSDFAWSRPRAPRR"
                     /name="hypothetical protein"
     gene            complement(1016..1318)
                     /locus_tag="JMX01_RS26815"
     CDS             complement(1016..1318)
                     /locus_tag="JMX01_RS26815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005161566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TM2 domain-containing protein"
                     /protein_id="WP_031942343.1"
                     /translation="MSSMVYCRGCGKEIHETAKSCPHCGATNASSGSGEKSRIAAALLA
                     FFLGGFGAHKFYLGKIGQGFLYLIFCWTFIPAIIAFIEFIIYLCDSDEKFARKYG"
                     /name="TM2 domain-containing protein"
     Typing          183..356
                     /name="MOBP"
                     /typing="oriT"
                     /tool="MOB-suite"
                     /identity="100.0"
                     /coverage="100.0"
                     /evalue="2.5600000000000002e-86"
     Typing          complement(2..204)
                     /name="rep_cluster_2335"
                     /typing="replicon"
                     /tool="MOB-suite"
                     /identity="93.137"
                     /coverage="81.0"
                     /evalue="1.7e-78"
     Typing          complement(1423..1916)
                     /name="rep_cluster_2358"
                     /typing="replicon"
                     /tool="MOB-suite"
                     /identity="83.939"
                     /coverage="99.0"
                     /evalue="8.19e-131"
ORIGIN
        1 actgatttga gcgtcagatt tcatgatgtt tgtcaggggg gcggagccta tggaaaaacg
       61 gcttcgccgc ggccttatct cttccctgtt aagctccttc ctggtatctc ccaggaaatt
      121 tccgccccgc ctgtaagccg gcaccgctcg ccgcagccga acgaccgagc gcagcgagtc
      181 agtgagcgag gaagcggaat atatcctgta ctacatatcc tgctgacgcg ctggtgccgc
      241 cttttttctc ctgctacatg aagcacttca ctgatttcca catccgtgcc aacatagtca
      301 gccagtatac actccgctag cgctacgtga ctggttcagg gctgcgcccc gaaacccgct
      361 aaaagctaat gacgcgcctg cggcttgtcc aacgcctcac ggcaccggat taaaatccgc
      421 tcccgttcac cgtttctgac tgcctttcac cgtcgctggc gcttcatcgt ttctactgtg
      481 tctggcagac tgtgctgatt tattctgact ggagaacgtt atggccagac tgacaaactt
      541 gacgcctgca gagaaaaaat ttcttgatga tgctgttgcc gcagctgaaa gagcgtcagg
      601 taaaaagcta aatcagccta accggcacat cgtcctgaac agagcgcgtg cgcaaattga
      661 gttgcagcgt tacgccgacc gccagcgtgc attacgtgag gatgagcggc agcagtccga
      721 ttttgcctgg tcacgtccgc gcgcgccgcg ccgctgattt tggcttttgg cggtttagtg
      781 gtgctgacgc tgcgaaatca cctgccattc acctgcgtgc atagccatgc agtcgcgcag
      841 aaatcatcag gggcgttttt ccgggatact ggtgaggaaa ggtgctggaa acggccctga
      901 tgcagcagga ttgcgctgag ggcgcctgcg ggggtgcggg caagggatgt tatgtttaat
      961 cggtctgacc gtcaggtaca aaaaaagccc ttagggggct tttttttgct atgagttagc
     1021 catattttcg tgcgaatttt tcatcggaat cgcatagata aataataaac tcaataaacg
     1081 cgatgatcgc gggtatgaat gtccagcaaa aaattagata caggaacccc tgtcctattt
     1141 ttcctaagta aaatttatgt gcgccaaatc caccaaggaa gaatgctaat agcgcggctg
     1201 cgattctact tttttcacct gaacctgaag aggcgtttgt ggctccgcag tgcgggcatg
     1261 actttgctgt ttcgtgtatt tccttgccac atcctcggca gtaaaccatt gaactcattt
     1321 tttatcctcg agcttatttt aattgggatc ataatatccg atgttttata acgatgtgta
     1381 tcctatgtgc tcggattgga tagatttcca ttacggtgaa ggatcttctt gagatccttt
     1441 ctgtggcgtc gtaatctctt gctctgtaaa cgaaaaaacc gccctgcaag gcggtttttc
     1501 gaaggttctc agagcagcaa ctctttgaac cgtggtaact ggcttacgag gagcgcagta
     1561 accaaatctg ttctttcagt ttagccttaa caggcgcata acttcaagac taactcctct
     1621 aaatcagtta ccagtggctg ctgccagtgg cgataagtcg tgtctttccg ggttggactc
     1681 aagatgatag ttaccggata aggcgcagca gtcggactga acggggggtt cgtgcataca
     1741 gtccatccag gagcgaactg ccttcgcgga actgagtgtc aggcgtggaa tgagataaac
     1801 gcggccataa cagcggaatg acaccggtaa accgaaaggc aggaatgcgg gggagcacga
     1861 gggagccacc agggggaaac gcctggtatc tttaagccgc atcgggtttc gccacc
//
