LOCUS       NZ_LR890450             2442 bp    DNA     circular CON 18-JUN-2023
DEFINITION  Klebsiella pneumoniae strain INF171 isolate INF171 plasmid 5,
            complete sequence.
ACCESSION   NZ_LR890450
VERSION     NZ_LR890450.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA3357101
            Assembly: GCF_904864625.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Klebsiella/Raoultella group; Klebsiella.
REFERENCE   1
  AUTHORS   Hawkey,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-OCT-2020) THE UNIVERSITY OF MELBOURNE, 30 Flemington
            Rd, Australia
COMMENT     ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Date                   :: 06/18/2023 11:22:33
            Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline
            (PGAP)
            Annotation Method :: Best-placed reference protein set; GeneMarkS-2+
            Annotation Software revision      :: 6.5
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,406
            CDSs (total)                      :: 5,284
            Genes (coding)                    :: 5,162
            CDSs (with protein)               :: 5,162
            Genes (RNA)                       :: 122
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 86
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 122
            CDSs (without protein)            :: 122
            Pseudo Genes (ambiguous residues) :: 0 of 122
            Pseudo Genes (frameshifted)       :: 50 of 122
            Pseudo Genes (incomplete)         :: 73 of 122
            Pseudo Genes (internal stop)      :: 22 of 122
            Pseudo Genes (multiple problems)  :: 19 of 122
            ##Genome-Annotation-Data-END##
            REFSEQ INFORMATION: The reference sequence is identical to
            LR890450.1.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2442
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="INF171"
                     /isolate="INF171"
                     /isolation_source="urine"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /plasmid="5"
                     /geo_loc_name="Australia"
                     /collection_date="2013-09"
     gene            join(2044..2442,1..84)
                     /locus_tag="JMW80_RS26945"
     CDS             join(2044..2442,1..84)
                     /locus_tag="JMW80_RS26945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001565850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WP_223375251.1"
                     /translation="MNTKKISRLERHTYMDENGEVKQDSKIETFSIPAEPPYVKLYIAD
                     IAMIHGLSKSQNDVLLQLAMLIGWDGFVSVSKTRFEKTIQPRVHIEYQTFKNIIAALVD
                     KQIFFRAGRGELEANPFLFARGDWPSIYERRKKIELKISYDTNGRTVQTKVMDDEC"
                     /name="hypothetical protein"
     gene            71..301
                     /locus_tag="JMW80_RS26950"
     CDS             71..301
                     /locus_tag="JMW80_RS26950"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WP_124788667.1"
                     /translation="MMNAEDKLFKNVDRLMLHDSLKKNEVLTVWERTFLSSVYSIYRRT
                     SGNKYSTKGLSPKQKNAAFSILKKHNYHLND"
                     /name="hypothetical protein"
     gene            complement(371..1339)
                     /gene="mobV"
                     /locus_tag="JMW80_RS26955"
     CDS             complement(371..1339)
                     /gene="mobV"
                     /locus_tag="JMW80_RS26955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000024818.1"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006310 - DNA recombination [Evidence IEA]"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MobV family relaxase"
                     /protein_id="WP_000024818.1"
                     /translation="MANYAIMRCKKLTGMGSVASALQHCYRERETPNANAERTPENYCS
                     VSKSTDQAMGRVRELLPEKRRKDAVLAVEYVMTASPEWWKEATPRQQAEFFARSEQWLE
                     KKYGKDRVVAAVVHRDEATPHLSAFVVPLTQDGRLSAKEFIGGRSKMREDQSTYAESVK
                     KLGLERGIEGSRATHQTVQHYYESINRGTRSQVSISPEALEPRVLRKGIFTKDVEDQAA
                     IAKRLSHAVNDGFAGTIAMASQSAQNAKRARELQKTMDAQQKRLQSVTEPFKGLSREQM
                     TEILMMAQRFKQQNQEKEKQQRIEREKQRQTRSRGMGGMER"
                     /name="mobV"
     Typing          complement(375..1348)
                     /name="MOBV"
                     /typing="relaxase"
                     /tool="MOB-suite"
                     /identity="95.077"
                     /coverage="96.0"
                     /evalue="0.0"
ORIGIN
        1 agaagaaaga aaattgagtt aaagatcagt tatgacacca atggaagaac ggtgcagacg
       61 aaggtaatgg atgatgaatg ctgaagataa actttttaaa aatgtagaca ggctaatgct
      121 gcatgattca ctaaaaaaga atgaggttct gactgtttgg gagcgtactt ttttaagcag
      181 tgtttacagc atatatcgta gaactagcgg taataaatac tcaactaagg gtttgtcacc
      241 aaagcagaaa aacgcagctt tttctatttt aaaaaaacat aattaccatc tgaatgatta
      301 attttttcgt ggtgaatgcc gcaaatgacg tcactttgcg gcgttagccc tatcctgcat
      361 cgcatcaaaa ctaacgctcc ataccaccca tgccacgcga tcgcgtctgt cgctgttttt
      421 cacgttcaat acgctgctgt ttttcctttt cctggttttg ctgcttaaac cgctgagcca
      481 tcatcaggat ttcggtcatc tgctctctgg aaagcccctt aaaaggctct gtgacgctct
      541 gtaggcgttt ctgctgcgca tccatagtct tctgtagctc acgcgctctt tttgcgttct
      601 gggcgctctg agaggccata gcgatggttc ctgcaaagcc atcgttcact gcgtggctta
      661 gacgtttggc tatggctgcc tgatcttcca cgtctttggt gaaaatgccc ttccgcaata
      721 cacgcggctc cagcgcctcc ggcgagatcg atacctggct acgggtgcca cggtttatcg
      781 attcgtagta gtgctgaact gtctgatgcg tggcgcggct tccctcgatg ccgcgctcaa
      841 gacccagttt ttttactgat tcagcgtagg tgctctgatc ttcacgcatc tttgaccgcc
      901 cgccaataaa ctctttcgcg gacagccgtc catcctgcgt caatggcacc acgaacgcag
      961 acaggtgcgg ggtggcctcg tcccggtgaa ccaccgccgc cacaacacga tccttcccgt
     1021 atttcttctc cagccattgc tcagagcggg cgaaaaactc cgcctgctgc cgtggtgtgg
     1081 cctctttcca ccactcaggg cttgctgtca taacgtattc aacggccagt accgcatctt
     1141 tacggcgttt ttccggcagc agctcccgca cacgccccat tgcctgatcc gttgatttgg
     1201 acacagagca gtagttttct ggtgtccgtt cagcgttagc gttcggcgtc tcacgctctc
     1261 ggtagcagtg ctgcaacgcg ctggccacgc ttcccattcc cgtcagcttt ttgcagcgca
     1321 ttatcgcgta gttcgccatg ttcccccctg attccggcat tcattcagcc aggcggggga
     1381 gcgcattgcg atacctccgg cgggccacta tcaagatgat agtgtactca ctagactttg
     1441 ctacgcaaaa tcgttcgggc agcaagctgc cagaaggtca aaatcaacgg cggtctggca
     1501 ggtggaaggc gtcgcttcgc gccacccccc accactgcca agcctgtttt atccggagtg
     1561 tcgtcaaggg taaatggcac tcgctacgct cgcccttgac gaaatcaggc aatgaaatcg
     1621 tctttgaaag agcagaaacc gctcgccgca gctttggctg aggcgtaccg caggagcaac
     1681 gcgacgagga acgaacagcc aaagcgagga agcggaattt ccactccccg tacatagaaa
     1741 tgcgtacact ccttgctaaa aaaaggcagt ttttcagtgt ctaaaaatgc cgtttttcag
     1801 cccttatttt cccccttaat atatagatat agatatggga acccgcttgt accaagggct
     1861 agagcgaaga atcgtactca cctcaagtac caatcgtact cacctcaagt actaatcgta
     1921 ctcacctcaa ggactaatcg tactcacctc aagtactaat cgtacttgat acaaaggact
     1981 tgactgtatg tctctttagt acttaaatgc gagtactaaa tcatggcgaa acgtggggct
     2041 ggagtgaata cgaaaaagat ttctaggctt gaacggcata catacatgga tgaaaacggt
     2101 gaggtaaaac aagactctaa gatcgagacc ttttccatcc cagccgaacc tccctacgtc
     2161 aagctataca ttgcagacat tgcgatgatt catggtttat caaaatctca aaatgatgtg
     2221 cttttacaat tggcaatgct gattggatgg gatgggtttg tgtctgtatc aaaaactaga
     2281 tttgaaaaaa ccatacagcc cagggttcat attgaatatc agacctttaa aaacataatt
     2341 gcggctcttg tagataaaca aatattcttc cgggcagggc gtggggaact tgaagctaac
     2401 ccctttcttt ttgcacgggg agactggcca tcaatttacg aa
//
