LOCUS       NZ_LR890394             1916 bp    DNA     circular CON 18-JUN-2023
DEFINITION  Klebsiella pneumoniae strain KSB2_2C isolate KSB2_2C plasmid 4,
            complete sequence.
ACCESSION   NZ_LR890394
VERSION     NZ_LR890394.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA3357423
            Assembly: GCF_904864515.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Klebsiella/Raoultella group; Klebsiella.
REFERENCE   1
  AUTHORS   Hawkey,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-OCT-2020) THE UNIVERSITY OF MELBOURNE, 30 Flemington
            Rd, Australia
COMMENT     ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Date                   :: 06/18/2023 11:14:02
            Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline
            (PGAP)
            Annotation Method :: Best-placed reference protein set; GeneMarkS-2+
            Annotation Software revision      :: 6.5
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,325
            CDSs (total)                      :: 5,207
            Genes (coding)                    :: 5,075
            CDSs (with protein)               :: 5,075
            Genes (RNA)                       :: 118
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 84
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 132
            CDSs (without protein)            :: 132
            Pseudo Genes (ambiguous residues) :: 0 of 132
            Pseudo Genes (frameshifted)       :: 53 of 132
            Pseudo Genes (incomplete)         :: 82 of 132
            Pseudo Genes (internal stop)      :: 21 of 132
            Pseudo Genes (multiple problems)  :: 21 of 132
            ##Genome-Annotation-Data-END##
            REFSEQ INFORMATION: The reference sequence is identical to
            LR890394.1.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1916
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="KSB2_2C"
                     /isolate="KSB2_2C"
                     /isolation_source="rectal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /plasmid="4"
                     /geo_loc_name="Australia"
                     /collection_date="2014-03"
     gene            482..784
                     /locus_tag="JMW68_RS26505"
     CDS             482..784
                     /locus_tag="JMW68_RS26505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005161566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TM2 domain-containing protein"
                     /protein_id="WP_031942343.1"
                     /translation="MSSMVYCRGCGKEIHETAKSCPHCGATNASSGSGEKSRIAAALLA
                     FFLGGFGAHKFYLGKIGQGFLYLIFCWTFIPAIIAFIEFIIYLCDSDEKFARKYG"
                     /name="TM2 domain-containing protein"
     gene            complement(1043..1279)
                     /locus_tag="JMW68_RS26510"
     CDS             complement(1043..1279)
                     /locus_tag="JMW68_RS26510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001676031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WP_012772745.1"
                     /translation="MARLTNLTPAEKKFLDDAVAAAERASGKKLNQPNRHIVLNRARAQ
                     IELQRYADRQRALREDERQQSDFAWSRPRAPRR"
                     /name="hypothetical protein"
     Typing          complement(1445..1618)
                     /name="MOBP"
                     /typing="oriT"
                     /tool="MOB-suite"
                     /identity="100.0"
                     /coverage="100.0"
                     /evalue="2.5600000000000002e-86"
     Typing          2..171
                     /name="rep_cluster_2335"
                     /typing="replicon"
                     /tool="MOB-suite"
                     /identity="93.567"
                     /coverage="90.0"
                     /evalue="1.54e-65"
     Typing          1597..1916
                     /name="rep_cluster_2335"
                     /typing="replicon"
                     /tool="MOB-suite"
                     /identity="92.547"
                     /coverage="81.0"
                     /evalue="7.36e-127"
ORIGIN
        1 tttatctcat tccacgcctg acactcagtt ccgcgaaggc agttcgctcc tggatggact
       61 gtatgcacga accccccgtt cagtccgact gctgcgcctt atccggtaac tatcatcttg
      121 agtccaaccc ggaaagacac gacttatcgc cactggcagc agccactggt aactgattta
      181 gaggagttag tcttgaagtt atgcgcctgt taaggctaaa ctgaaagaac agatttggtt
      241 actgcgctcc tcgtaagcca gttaccacgg ttcaaagagt tgctgctctg agaaccttcg
      301 aaaaaccgcc ttgcagggcg gttttttcgt ttacagagca agagattacg acgccacaga
      361 aaggatctca agaagatcct tcaccgtaat ggaaatctat ccaatccgag cacataggat
      421 acacatcgtt ataaaacatc ggatattatg atcccaatta aaataagctc gaggataaaa
      481 aatgagttca atggtttact gccgaggatg tggcaaggaa atacacgaaa cagcaaagtc
      541 atgcccgcac tgcggagcca caaacgcctc ttcaggttca ggtgaaaaaa gtagaatcgc
      601 agccgcgcta ttagcattct tccttggtgg atttggcgca cataaatttt acttaggaaa
      661 aataggacag gggttcctgt atctaatttt ttgctggaca ttcatacccg cgatcatcgc
      721 gtttattgag tttattattt atctatgcga ttccgatgaa aaattcgcac gaaaatatgg
      781 ctaactcata gcaaaaaaaa gccccctaag ggcttttttt gtacctgacg gtcagaccga
      841 ttaaacataa catcccttgc ccgcaccccc gcaggcgccc tcagcgcaat cctgctgcat
      901 cagggccgtt tccagcacct ttcctcacca gtatcccgga aaaacgcccc tgatgatttc
      961 tgcgcgactg catggctatg cacgcaggtg aatggcaggt gatttcgcag cgtcagcacc
     1021 actaaaccgc caaaagccaa aatcagcggc gcggcgcgcg cggacgtgac caggcaaaat
     1081 cggactgctg ccgctcatcc tcacgtaatg cacgctggcg gtcggcgtaa cgctgcaact
     1141 caatttgcgc acgcgctctg ttcaggacga tgtgccggtt aggctgattt agctttttac
     1201 ctgacgctct ttcagctgcg gcaacagcat catcaagaaa ttttttctct gcaggcgtca
     1261 agtttgtcag tctggccata acgttctcca gtcagaataa atcagcacag tctgccagac
     1321 acagtagaaa cgatgaagcg ccagcgacgg tgaaaggcag tcagaaacgg tgaacgggag
     1381 cggattttaa tccggtgccg tgaggcgttg gacaagccgc aggcgcgtca ttagctttta
     1441 gcgggtttcg gggcgcagcc ctgaaccagt cacgtagcgc tagcggagtg tatactggct
     1501 gactatgttg gcacggatgt ggaaatcagt gaagtgcttc atgtagcagg agaaaaaagg
     1561 cggcaccagc gcgtcagcag gatatgtagt acaggatata ttccgcttcc tcgctcactg
     1621 actcgctgcg ctcggtcgtt cggctgcggc gagcggtgcc ggcttacagg cggggcggaa
     1681 atttcctggg agataccagg aaggagctta acagggaaga gataaggccg cggcgaagcc
     1741 gtttttccat aggctccgcc cccctgacaa acatcatgaa atctgacgct caaatcagtg
     1801 gtggcgaaac ccgatgcggc ttaaagatac caggcgtttc cccctggtgg ctccctcgtg
     1861 ctcccccgca ttcctgcctt tcggtttacc ggtgtcattc cgctgttatg gccgcg
//
