LOCUS       NZ_LR890367             3325 bp    DNA     circular CON 18-JUN-2023
DEFINITION  Klebsiella pneumoniae strain INF049 isolate INF049 plasmid 8,
            complete sequence.
ACCESSION   NZ_LR890367
VERSION     NZ_LR890367.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA3357023
            Assembly: GCF_904863365.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Klebsiella/Raoultella group; Klebsiella.
REFERENCE   1
  AUTHORS   Hawkey,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-OCT-2020) THE UNIVERSITY OF MELBOURNE, 30 Flemington
            Rd, Australia
COMMENT     ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Date                   :: 06/18/2023 15:43:00
            Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline
            (PGAP)
            Annotation Method :: Best-placed reference protein set; GeneMarkS-2+
            Annotation Software revision      :: 6.5
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,553
            CDSs (total)                      :: 5,425
            Genes (coding)                    :: 5,294
            CDSs (with protein)               :: 5,294
            Genes (RNA)                       :: 128
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 88
            ncRNAs                            :: 15
            Pseudo Genes (total)              :: 131
            CDSs (without protein)            :: 131
            Pseudo Genes (ambiguous residues) :: 0 of 131
            Pseudo Genes (frameshifted)       :: 61 of 131
            Pseudo Genes (incomplete)         :: 69 of 131
            Pseudo Genes (internal stop)      :: 26 of 131
            Pseudo Genes (multiple problems)  :: 20 of 131
            ##Genome-Annotation-Data-END##
            REFSEQ INFORMATION: The reference sequence is identical to
            LR890367.1.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..3325
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="INF049"
                     /isolate="INF049"
                     /isolation_source="urine"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /plasmid="8"
                     /geo_loc_name="Australia"
                     /collection_date="2013-05"
     gene            complement(join(3046..3325,1..242))
                     /locus_tag="JMW75_RS27680"
     CDS             complement(join(3046..3325,1..242))
                     /locus_tag="JMW75_RS27680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008431795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WP_009310069.1"
                     /translation="MSDLQNKLVFSESPRVELGSNFFINVPVILQYKDTPLISVESAVD
                     ASFTTSIPIYHNDGTYLALAKGTQLYRTEEGRKAGVTLRYEDKVTVCLLNGKEVFELRR
                     QSAAALKAEAELYVPDGKLISYRGSSPKLFSTENNQLAIRGLVMSGSTFSGCKIGILLD
                     ENSIAIGVNP"
                     /name="hypothetical protein"
     gene            1007..1156
                     /locus_tag="JMW75_RS27685"
     CDS             1007..1156
                     /locus_tag="JMW75_RS27685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017880354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WP_009310068.1"
                     /translation="MPSEYDEKLDSTDTQLPGEYDLFDLMAQVTEENLHAPVDSGPPVG
                     REAL"
                     /name="hypothetical protein"
     gene            1637..1828
                     /locus_tag="JMW75_RS27690"
     CDS             1637..1828
                     /locus_tag="JMW75_RS27690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000166328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rop family plasmid primer RNA-binding protein"
                     /protein_id="WP_000166328.1"
                     /translation="MTKQQKTALNMAKFIQNQSLLLLEKLNELDLDAEADLCEKLHDDA
                     EHLFRTLSSRLDALQDGN"
                     /name="Rop family plasmid primer RNA-binding protein"
     gene            1828..2250
                     /locus_tag="JMW75_RS27695"
     CDS             1828..2250
                     /locus_tag="JMW75_RS27695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005229777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="WP_032451468.1"
                     /translation="MARVSISEAARLVKVSRPTIYKMINSGKLSYTSVVKHGKGIKVID
                     TSELIRVFGPLDGVIDAVKYDVKSDAESTGINSVGLHDLQHRIALLEAENDGLKGAVKA
                     RDEHIDSLRQAMQLLEHKHEPSSPPHSPWWKFWKKS"
                     /name="helix-turn-helix domain-containing protein"
ORIGIN
        1 actcctgcct ttctaccttc ttcagtacgg tagagctgcg ttcctttagc cagggccagg
       61 tatgttccat cgttgtgata gatagggatg ctggtagtga aactagcatc aaccgcactc
      121 tcaacactaa taagtggggt gtctttatac tgaagtatta ctgggacgtt gatgaaaaaa
      181 ttagaaccaa gctcaactcg agggctttca ctaaatacga gtttattctg caaatcactc
      241 atggatacat cctttttttg tcaaaaaaaa cctaatgccc ccgtggtggg tatataaaaa
      301 tcacggggag cgtagcgacc ttcgtccagc tcgtttcttg tgtgtctcac cctgcaaaag
      361 gttcgattgt gtgggagtag tgtccgacgt tttcaatcac actactccgc ttactacttt
      421 cttagacact cgttttatca ggtgcttgtt atcgtacagc gagacggggt agagcttaac
      481 tcttttgcgg ttaagttaca tatccaccaa ttgcctgttt atcctgccgg agtccggggc
      541 gtagacctga gtgtctaagg tgcagatatt attttaatgt cgttgaatgg tattaagctg
      601 gtagtgacaa tgctagccag ccctgctagg atttgatttc tgacgtctat tcctggcagg
      661 tatctgcgaa gaattagagt accgaagccc tgtgattctg tcacggggct tttgtacatt
      721 taaagccaga gaatcaaaaa catccccaca aagacacctt caccgctcgc cgcagccgaa
      781 cgaccgagcg tagcgagtca gtgagcgagg aagcggaaga gccactgcct tggcatggtt
      841 cacaggacac tctggtcatg catatttcac accctgcatg gcgcacttca cctgaccttt
      901 cgctcatggc aacatatcaa gccagtctac cgctagtgct acgtgacggg ttcagggctg
      961 cacccctaaa accgctaaca acctctcagc tactggatat caccccatgc catctgaata
     1021 tgatgaaaaa ctggattcga ctgatacgca gcttcccggc gaatatgacc tttttgattt
     1081 aatggcgcag gttactgaag agaacctgca tgcccctgtg gattctgggc cgcctgtcgg
     1141 ccgggaagcg ttatagcttt ttcgcttgcc cgcgtacgtg gtaatacgcc ggtattacat
     1201 tttatttctt tattttcatg cgattacagg tgattgtaat acgttgcgta ttacataaac
     1261 aaacggagat ttcagttttt accttttaat tcatgcagtt gcgatgaaag tcgcggctgc
     1321 gttaggtgta tgaccattta aggggcaaaa aattatcatt ctggccgcgt gatctgcgca
     1381 ggttaaggag catcggcgac gaaaaagcgt ctttaactgc ttcgttcatg caagcatgaa
     1441 cggattattt ttccggacta caggtaaact acaggaagac tacaaaagtt gatgacttaa
     1501 tcctgatttt tagtgcgatg actacagata aactacaaaa taactacagg attacctcag
     1561 atccgttctc tgaaccattc gtacatccga cccccttacc ggttttacac tgagcactga
     1621 tgctctgaga tcccttatga cgaaacaaca gaaaacagcg ctgaacatgg ctaaattcat
     1681 ccagaatcag tctctgctcc tgctggagaa gcttaacgag cttgatctcg atgctgaggc
     1741 cgacctttgt gagaaactcc acgatgatgc ggagcatctt ttccgtacac tgtcctcgag
     1801 actggatgca ttacaggatg gtaactgatg gccagagtgt ctattagtga agcagcacgg
     1861 cttgttaagg ttagtcgccc tactatttac aagatgatta acagtggtaa gttaagttac
     1921 acctctgttg taaagcacgg gaagggtatt aaagttattg atacatcaga gcttattaga
     1981 gtatttggtc ctcttgatgg tgtaatcgat gctgtaaaat atgatgtaaa aagtgacgca
     2041 gaatctacag gtattaacag cgttggttta catgatttac aacatagaat cgctttactt
     2101 gaagctgaaa acgatggtct taaaggggct gttaaggctc gagatgagca tattgattcc
     2161 cttcgtcagg ctatgcagct tctggagcac aagcacgaac cttcttcacc accccattcc
     2221 ccgtggtgga aattctggaa aaaatcctga tcccgccatg cttgagtttt cctctccggc
     2281 catgccgggg cgttcgtgaa ccttcccaaa aatcgccaga tctctgaacg ctcctcacac
     2341 taaaaatatc cacaccccac gcaaaattaa atttttgcag ataactcatt aatatcagtc
     2401 agttggttgt tattaaatta cgcagtatta ccttctgtaa ggtcaatcca agtcgtcggt
     2461 gattcgtgta cgacttgccg acgactcgtc atagagtcat cgacgactca cttaagacta
     2521 tcagtaactt atgacgactt gactctagag tcgaatcgtt attttggtgt ttttttgacc
     2581 ttgacgactc tagagtcaag tcacgagtcg aatcgccggt gaatcgtgtg gtgagtcgtc
     2641 cggcgacttg ccataacgtg attgccggcc gtcgacgaac ccgattcctg atcgtgctga
     2701 aaaccggttt tccggctgcg ccggcaacgc ttcacggcca cgcaataaat tgcgtccccg
     2761 ttcaccgttt tcggatagga agaacgccgg aaacaggact taccctggct gaatggcgtg
     2821 aatttccgcg ctatgcactt gcgcgcatac tcatgcatgc cgtaaaaaca gagcctgcgc
     2881 gtttctggcg ggttttcggg tggtttgttg cctgttttac cgctttcccg tcagaaacgc
     2941 cctgagggcc tctcaggtgg tgctgataac ggatgttatg gtaaatacag gtgagcggga
     3001 taaaccatca tcttttattg cgtgcgcaag aaataaccaa cgcggctacg gatttacacc
     3061 aatcgctatg ctgttttcat ctagcaatat ccctatttta cacccgctga atgttgatcc
     3121 ggacatcact aaaccgcgta tagctagttg attgttttcc gtgctgaaca actttggcga
     3181 ggatcctcga taacttatta gctttccatc aggaacataa agctcagcct ctgcttttag
     3241 tgcagctgcg ctttgtcttc tgagctcgaa tacctctttc ccgttaagaa gacaaacagt
     3301 taccttatct tcataccgga gagtc
//
