LOCUS       NZ_LR890348             1916 bp    DNA     circular CON 18-JUN-2023
DEFINITION  Klebsiella pneumoniae strain KSB2_2B isolate KSB2_2B plasmid 6,
            complete sequence.
ACCESSION   NZ_LR890348
VERSION     NZ_LR890348.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA3357408
            Assembly: GCF_904863295.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Klebsiella/Raoultella group; Klebsiella.
REFERENCE   1
  AUTHORS   Hawkey,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-OCT-2020) THE UNIVERSITY OF MELBOURNE, 30 Flemington
            Rd, Australia
COMMENT     ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Date                   :: 06/18/2023 11:21:38
            Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline
            (PGAP)
            Annotation Method :: Best-placed reference protein set; GeneMarkS-2+
            Annotation Software revision      :: 6.5
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,390
            CDSs (total)                      :: 5,272
            Genes (coding)                    :: 4,992
            CDSs (with protein)               :: 4,992
            Genes (RNA)                       :: 118
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 84
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 280
            CDSs (without protein)            :: 280
            Pseudo Genes (ambiguous residues) :: 0 of 280
            Pseudo Genes (frameshifted)       :: 190 of 280
            Pseudo Genes (incomplete)         :: 102 of 280
            Pseudo Genes (internal stop)      :: 24 of 280
            Pseudo Genes (multiple problems)  :: 33 of 280
            ##Genome-Annotation-Data-END##
            REFSEQ INFORMATION: The reference sequence is identical to
            LR890348.1.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1916
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="KSB2_2B"
                     /isolate="KSB2_2B"
                     /isolation_source="rectal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /plasmid="6"
                     /geo_loc_name="Australia"
                     /collection_date="2014-03"
     gene            841..1143
                     /locus_tag="JMW06_RS26795"
     CDS             841..1143
                     /locus_tag="JMW06_RS26795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005161566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TM2 domain-containing protein"
                     /protein_id="WP_031942343.1"
                     /translation="MSSMVYCRGCGKEIHETAKSCPHCGATNASSGSGEKSRIAAALLA
                     FFLGGFGAHKFYLGKIGQGFLYLIFCWTFIPAIIAFIEFIIYLCDSDEKFARKYG"
                     /name="TM2 domain-containing protein"
     gene            complement(1402..1638)
                     /locus_tag="JMW06_RS26800"
     CDS             complement(1402..1638)
                     /locus_tag="JMW06_RS26800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001676031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WP_012772745.1"
                     /translation="MARLTNLTPAEKKFLDDAVAAAERASGKKLNQPNRHIVLNRARAQ
                     IELQRYADRQRALREDERQQSDFAWSRPRAPRR"
                     /name="hypothetical protein"
     Typing          complement(1804..1916)
                     /name="MOBP"
                     /typing="oriT"
                     /tool="MOB-suite"
                     /identity="100.0"
                     /coverage="100.0"
                     /evalue="2.08e-52"
     Typing          40..531
                     /name="rep_cluster_2335"
                     /typing="replicon"
                     /tool="MOB-suite"
                     /identity="92.51"
                     /coverage="81.0"
                     /evalue="0.0"
ORIGIN
        1 aggcggcacc agcgcgtcag caggatatgt agtacaggat atattccgct tcctcgctca
       61 ctgactcgct gcgctcggtc gttcggctgc ggcgagcggt gccggcttac aggcggggcg
      121 gaaatttcct gggagatacc aggaaggagc ttaacaggga agagataagg ccgcggcgaa
      181 gccgtttttc cataggctcc gcccccctga caaacatcat gaaatctgac gctcaaatca
      241 gtggtggcga aacccgatgc ggcttaaaga taccaggcgt ttccccctgg tggctccctc
      301 gtgctccccc gcattcctgc ctttcggttt accggtgtca ttccgctgtt atggccgcgt
      361 ttatctcatt ccacgcctga cactcagttc cgcgaaggca gttcgctcct ggatggactg
      421 tatgcacgaa ccccccgttc agtccgactg ctgcgcctta tccggtaact atcatcttga
      481 gtccaacccg gaaagacacg acttatcgcc actggcagca gccactggta actgatttag
      541 aggagttagt cttgaagtta tgcgcctgtt aaggctaaac tgaaagaaca gatttggtta
      601 ctgcgctcct cgtaagccag ttaccacggt tcaaagagtt gctgctctga gaaccttcga
      661 aaaaccgcct tgcagggcgg ttttttcgtt tacagagcaa gagattacga cgccacagaa
      721 aggatctcaa gaagatcctt caccgtaatg gaaatctatc caatccgagc acataggata
      781 cacatcgtta taaaacatcg gatattatga tcccaattaa aataagctcg aggataaaaa
      841 atgagttcaa tggtttactg ccgaggatgt ggcaaggaaa tacacgaaac agcaaagtca
      901 tgcccgcact gcggagccac aaacgcctct tcaggttcag gtgaaaaaag tagaatcgca
      961 gccgcgctat tagcattctt ccttggtgga tttggcgcac ataaatttta cttaggaaaa
     1021 ataggacagg ggttcctgta tctaattttt tgctggacat tcatacccgc gatcatcgcg
     1081 tttattgagt ttattattta tctatgcgat tccgatgaaa aattcgcacg aaaatatggc
     1141 taactcatag caaaaaaaag ccccctaagg gctttttttg tacctgacgg tcagaccgat
     1201 taaacataac atcccttgcc cgcacccccg caggcgccct cagcgcaatc ctgctgcatc
     1261 agggccgttt ccagcacctt tcctcaccag tatcccggaa aaacgcccct gatgatttct
     1321 gcgcgactgc atggctatgc acgcaggtga atggcaggtg atttcgcagc gtcagcacca
     1381 ctaaaccgcc aaaagccaaa atcagcggcg cggcgcgcgc ggacgtgacc aggcaaaatc
     1441 ggactgctgc cgctcatcct cacgtaatgc acgctggcgg tcggcgtaac gctgcaactc
     1501 aatttgcgca cgcgctctgt tcaggacgat gtgccggtta ggctgattta gctttttacc
     1561 tgacgctctt tcagctgcgg caacagcatc atcaagaaat tttttctctg caggcgtcaa
     1621 gtttgtcagt ctggccataa cgttctccag tcagaataaa tcagcacagt ctgccagaca
     1681 cagtagaaac gatgaagcgc cagcgacggt gaaaggcagt cagaaacggt gaacgggagc
     1741 ggattttaat ccggtgccgt gaggcgttgg acaagccgca ggcgcgtcat tagcttttag
     1801 cgggtttcgg ggcgcagccc tgaaccagtc acgtagcgct agcggagtgt atactggctg
     1861 actatgttgg cacggatgtg gaaatcagtg aagtgcttca tgtagcagga gaaaaa
//
