LOCUS       NZ_LR890213             3271 bp    DNA     circular CON 28-NOV-2023
DEFINITION  Klebsiella pneumoniae isolate INF022-sc-2279895 plasmid 5, complete
            sequence.
ACCESSION   NZ_LR890213
VERSION     NZ_LR890213.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA3356968
            Assembly: GCF_904863055.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Klebsiella/Raoultella group; Klebsiella.
REFERENCE   1
  AUTHORS   Hawkey,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-OCT-2020) THE UNIVERSITY OF MELBOURNE, 30 Flemington
            Rd, Australia
COMMENT     ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Date                   :: 11/28/2023 11:19:58
            Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline
            (PGAP)
            Annotation Method :: Best-placed reference protein set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,516
            CDSs (total)                      :: 5,391
            Genes (coding)                    :: 5,167
            CDSs (with protein)               :: 5,167
            Genes (RNA)                       :: 125
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 86
            ncRNAs                            :: 14
            Pseudo Genes (total)              :: 224
            CDSs (without protein)            :: 224
            Pseudo Genes (ambiguous residues) :: 0 of 224
            Pseudo Genes (frameshifted)       :: 69 of 224
            Pseudo Genes (incomplete)         :: 154 of 224
            Pseudo Genes (internal stop)      :: 40 of 224
            Pseudo Genes (multiple problems)  :: 31 of 224
            ##Genome-Annotation-Data-END##
            REFSEQ INFORMATION: The reference sequence is identical to
            LR890213.1.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..3271
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /isolate="INF022-sc-2279895"
                     /db_xref="taxon:573"
                     /plasmid="5"
     gene            join(3203..3271,1..93)
                     /locus_tag="JMW18_RS27340"
     CDS             join(3203..3271,1..93)
                     /locus_tag="JMW18_RS27340"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="Rop family plasmid primer RNA-binding protein"
                     /protein_id="WP_264920655.1"
                     /translation="MAKFLQHQSLLLLEKLNEFDLDAEADLCEKLHDDAEHLFRTLSSR
                     LDALQDGN"
                     /name="Rop family plasmid primer RNA-binding protein"
     gene            93..494
                     /locus_tag="JMW18_RS27345"
     CDS             93..494
                     /locus_tag="JMW18_RS27345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009310048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="WP_032744268.1"
                     /translation="MARVSISEAARLTGKSRTTLHRLIKAGDLSTCSGERNAKMVDTSE
                     LLRVFGPFQQPKGEHHSGQVAEQRDTAFADQSEQVIRHLKQEIEHLNTLLLSKDSHIDS
                     LKQAMLLLENHQAKLTESPAPWWKFWKKS"
                     /name="helix-turn-helix domain-containing protein"
     gene            1647..1931
                     /locus_tag="JMW18_RS27350"
     CDS             1647..1931
                     /locus_tag="JMW18_RS27350"
                     /inference="COORDINATES: protein motif:HMM:NF020265.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1778 domain-containing protein"
                     /protein_id="WP_044316655.1"
                     /translation="MNAVRKERFEFRLPEAAKRRIEEAAVISKVSVSQFVMESATFRAE
                     TVINEHRRLIVEEDVWEQVMAALERPPAPTQSMCKAFERYNSEESWICD"
                     /name="DUF1778 domain-containing protein"
     gene            1973..2452
                     /locus_tag="JMW18_RS27355"
     CDS             1973..2452
                     /locus_tag="JMW18_RS27355"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012792.3"
                     /GO_function="GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]; GO:0008080 - N-acetyltransferase activity [Evidence
                     IEA]"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="WP_065365727.1"
                     /translation="MANFSCGVTHLDEFLKTDLHKMQGRSLLKGYVLLSDDETPEIMGY
                     YTLSGASFERGHLSNRLRKKIPYSNMPAVLLGRLAIDQRIQRKGFGELLIVDAIHKVRA
                     TAGQIGIYAMFVEAHPGASSFYTRMGFIPSSMADDNKTFFYPANQFDDLIFGDKC"
                     /name="GNAT family N-acetyltransferase"
     Typing          complement(2645..3125)
                     /name="ColRNAI_rep_cluster_1987"
                     /typing="replicon"
                     /tool="MOB-suite"
                     /identity="88.683"
                     /coverage="92.0"
                     /evalue="1.2800000000000002e-163"
ORIGIN
        1 gaggccgacc tttgtgagaa actccacgat gatgcggagc atcttttccg tacactgtcc
       61 tcgagactgg atgcattaca ggatggtaac tgatggccag agtgtctatt agtgaggctg
      121 cccgactgac gggtaagagt agaacaacgc tgcacaggtt aattaaagca ggtgacctgt
      181 ccacctgtag cggtgaacgc aatgcaaaaa tggtagatac ttcagagctt ttacgtgtct
      241 ttggtccctt ccagcaaccg aagggcgaac accattctgg acaggtcgct gaacagcgtg
      301 atacagcctt tgctgaccag agtgaacagg tgattcgtca tctgaaacag gagattgaac
      361 acctgaacac cttacttttg tccaaggatt cgcacattga cagcctgaaa caggccatgc
      421 tccttcttga aaatcaccag gcaaaattaa ctgaatcccc ggcgccatgg tggaaattct
      481 ggaaaaaatc ctgatcccgc catgcttcca ttttgctctc cggccattcc ggggagttcc
      541 tgaaccttcc caaaaatcgt cagatccctg aacgctcctc accactaaaa atacccacac
      601 actacgcaaa attaaaattt tgcagataga cctttatttt caatcagtta tctattttaa
      661 attacgcaat tttatttttt gtaaggtgaa tccgagtcgt ggacgactct atggcgaatc
      721 gccgatgact tgcccacgat tcatatgtga atcacgccat ataatcagta cgttatgatg
      781 acttgactct agagtcgact tgccgggttg gtggcttttt gaccatggcg actctagagt
      841 caagtcacga gtcgaatcgc cggtgaatcg tgtggtgagt cgtccggcga cttgccataa
      901 cgtgattgcc ggccgtcgac gaacccgatt cctgaacgtg ctgaaaaccg gttttccggc
      961 tgcgccggca acgcttcacg gccacgcaat ttattgcgtc cccgttcacc gttttcagtc
     1021 gggtttggtg cgggttttga gttgtctggc gtgaattcag gctgaaatcc gccaccagtc
     1081 agtctggtgc ataacaattc atgcccgtaa aaagccctgg ggcgattttg aggcgttttc
     1141 agggggtaag atgtaggatt tgatggatta cggcccagaa tcgtttctgg ggcgtttgag
     1201 cggtgcgcgt aatgagacgt tatggtaaat ctggatcagt ggctggtttt ggagtgcgtg
     1261 ggtggattta tggggcgcaa aataccgtaa tgcacatccc ctgaatgctg tgtgatttgg
     1321 cccatacatt cgttcaaaat agcggtagat ttacatgcaa aaaaatgata aaatacactg
     1381 gcaatgacac ttagggggca ttggtagttc ttaagaacta ccaatgcccc ctaagtgtca
     1441 ttgccatatg taacttgttg ttttttaagg ttatttttcc gaaatttaag tttttttctc
     1501 aaaaaatact accctcaccc ttcattagct tgactggcat agtttctcag atcaaaatca
     1561 cctcaaatta cctgtacggt aaattaccgt accgtgcata tcgtcatgtg gtataaacca
     1621 ctgtgagcat tagctcagga gttgttatga acgcagtaag aaaggagcgg ttcgagtttc
     1681 gtctgcccga agctgcgaag cgccgtattg aagaagctgc tgttatttct aaagtgtccg
     1741 tatctcaatt tgtaatggag tctgcgactt ttagagctga aacagttatt aatgaacatc
     1801 gccgcttgat cgttgaagag gatgtttggg agcaagtcat ggctgccctt gaacgccctc
     1861 cagcaccaac acaaagtatg tgtaaagcgt ttgagcgtta taactctgag gagagttgga
     1921 tttgcgatta atccctggtt ttcaaccttt tgacttgtgt gctgagtaca gcatggcgaa
     1981 ctttagctgt ggagtcacac atttagatga gtttttgaaa accgatctcc acaaaatgca
     2041 ggggcgtagc ctattaaagg gctacgttct gctttctgat gatgaaactc cagaaattat
     2101 ggggtactac acgctgagcg gtgcatcgtt cgaacgaggg catttgagta accgcctgag
     2161 gaagaaaatt ccttactcga acatgccggc agtgctgtta ggtcgtcttg ctatcgatca
     2221 acgaattcag cgaaaaggtt ttggtgagtt actaattgtc gatgctatcc ataaagtgag
     2281 ggctactgct ggacagattg gtatctatgc catgtttgtt gaggcgcatc ctggagcttc
     2341 atctttttac acaagaatgg gattcattcc atcatcaatg gctgatgata ataaaacatt
     2401 tttctaccca gctaatcagt ttgatgatct tatctttggc gataaatgct agagtacttt
     2461 cacatatatc tatgagatat atgtgaaagt aaaaaaaaac cacccggcaa ggtggctttt
     2521 ttaaggttgg tgaaccggca agttcactaa accaaggtaa ctggctaaag aggagctagt
     2581 caccaaatca gtcctttcag tttagcctta accggcgcat aacttcaaga ctaactcctc
     2641 taatcagtta ccagtggctg ctgccagtgg cgctttgtcg tgcctattcg ggttggactc
     2701 aagacgatag ttaccggata aggcgcagta gtcggactga acggggggtt cgtgcataca
     2761 gtccagcttg gagcgaactg cctacccgga actgagtgtc aggcgtggaa tgagaaaaac
     2821 gcggccataa cagcggaatg acacgggtaa accgaatggc aggaacagga gagcgcacga
     2881 gggagccacc tatcagaaat gataggtatc tttatagtcc tgtcgggttt cgccaccact
     2941 gatttgagcg tcaatttcta tgatgcttgt caggggggcg gagcctatgg aaaaacggca
     3001 acgccgcgac cttatcttgt cccctccggt tatcagccct gtcgtcttat gctcttatac
     3061 gtgagttgcg accgctcgcc gcagccgaac ggcaggagcg tagcgactga gtgagcgagg
     3121 aagcggaaaa gagaacatcc ctacattgag cactgacgct ctgaggcttc ttatgacaaa
     3181 acaacagaaa acagctctga acatggctaa attcctccag catcagtctc tgctcctgct
     3241 ggagaagctt aacgagtttg atcttgatgc a
//
