LOCUS       NZ_LR890207             3223 bp    DNA     circular CON 10-OCT-2022
DEFINITION  Klebsiella pneumoniae strain INF277 isolate INF277 plasmid 4,
            complete sequence.
ACCESSION   NZ_LR890207
VERSION     NZ_LR890207.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN06112222
            Assembly: GCF_904863215.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Klebsiella/Raoultella group; Klebsiella.
REFERENCE   1
  AUTHORS   Hawkey,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-OCT-2020) THE UNIVERSITY OF MELBOURNE, 30 Flemington
            Rd, Australia
COMMENT     ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Date                   :: 10/10/2022 08:13:54
            Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline
            (PGAP)
            Annotation Method :: Best-placed reference protein set; GeneMarkS-2+
            Annotation Software revision      :: 6.3
            Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region
            Genes (total)                     :: 5,461
            CDSs (total)                      :: 5,340
            Genes (coding)                    :: 5,192
            CDSs (with protein)               :: 5,192
            Genes (RNA)                       :: 121
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 87
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 148
            CDSs (without protein)            :: 148
            Pseudo Genes (ambiguous residues) :: 0 of 148
            Pseudo Genes (frameshifted)       :: 56 of 148
            Pseudo Genes (incomplete)         :: 93 of 148
            Pseudo Genes (internal stop)      :: 25 of 148
            Pseudo Genes (multiple problems)  :: 23 of 148
            ##Genome-Annotation-Data-END##
            REFSEQ INFORMATION: The reference sequence is identical to
            LR890207.1.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..3223
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="INF277"
                     /isolate="INF277"
                     /isolation_source="BAL"
                     /db_xref="taxon:573"
                     /plasmid="4"
     gene            complement(602..934)
                     /locus_tag="JMW21_RS27160"
     CDS             complement(602..934)
                     /locus_tag="JMW21_RS27160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001070439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EmrE family multidrug efflux SMR transporter"
                     /protein_id="WP_001099531.1"
                     /translation="MNTYIFLGGAIVAEVIGTTFMKYSEGFTRLWPSVGTAISYCAAFY
                     LLSQTLENIPTGIAYAIWSGAGIVLISLAGWLVSGQKLDWPAIAGMFLICVGVLVINIF
                     SKSSAH"
                     /name="EmrE family multidrug efflux SMR transporter"
     gene            complement(1102..1317)
                     /locus_tag="JMW21_RS27165"
     CDS             complement(1102..1317)
                     /locus_tag="JMW21_RS27165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000137421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MbeD family mobilization/exclusion protein"
                     /protein_id="WP_024195375.1"
                     /translation="MTELEKQLLSALEQLQQDYSKRLDEWENAFAEWRTMSGLIQRENA
                     ALNERVTVLSRQVQSLSEQLRRLSKG"
                     /name="MbeD family mobilization/exclusion protein"
     gene            complement(1321..1806)
                     /locus_tag="JMW21_RS27170"
     CDS             complement(1321..1806)
                     /locus_tag="JMW21_RS27170"
                     /inference="COORDINATES: protein motif:HMM:NF016710.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MbeB family mobilization protein"
                     /protein_id="WP_025367738.1"
                     /translation="MNSLLTLAKDLEQKSKAQQQTTGEMLKAAFSEHEKSVRAELSESE
                     KRISAAILDHDRKLSSAMSQRTKGMLRMVSQTWLTIVLVSALLIASSAGILWWQGQQIL
                     ENYTTIREQKSTQAMLSERNSGVQLSTCGEQRRRCVRVNPEAGQFGEDSSWMILAGK"
                     /name="MbeB family mobilization protein"
     gene            complement(<1841..2275)
                     /locus_tag="JMW21_RS27560"
                     /pseudo=""
     CDS             complement(<1841..2275)
                     /locus_tag="JMW21_RS27560"
                     /inference="COORDINATES: protein motif:HMM:NF015397.2"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo=""
                     /codon_start=1
                     /transl_table=11
                     /product="relaxase/mobilization nuclease domain-containing
                     protein"
                     /name="relaxase/mobilization nuclease domain-containing
                     protein"
     gene            complement(2484..2807)
                     /locus_tag="JMW21_RS27180"
     CDS             complement(2484..2807)
                     /locus_tag="JMW21_RS27180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000957083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MobC family plasmid mobilization relaxosome
                     protein"
                     /protein_id="WP_004193914.1"
                     /translation="MLTMWVTEDEHRRLLERCEGKQLAAWMRQTCLDEKPARAGKLPSI
                     SPALLRQLAGMGNNLNQIARQVNAGGGSGHDRVQIVAALMAIDAGLERLRHAVLEKGAD
                     DDR"
                     /name="MobC family plasmid mobilization relaxosome protein"
     ARG             complement(603..934)
                     /name="qacG"
                     /gene="qacG"
                     /gene_name="small multidrug resistance (SMR) antibiotic
                     efflux pump"
                     /tool="rgi"
                     /drug_class="disinfecting agents and antiseptics"
                     /identity="41.35"
                     /coverage="102.8"
     Typing          complement(2904..3095)
                     /name="MOB_unknown"
                     /typing="oriT"
                     /tool="MOB-suite"
                     /identity="92.308"
                     /coverage="89.0"
                     /evalue="3.38e-71"
     Typing          46..562
                     /name="rep_cluster_2358"
                     /typing="replicon"
                     /tool="MOB-suite"
                     /identity="82.319"
                     /coverage="98.0"
                     /evalue="8.31e-121"
     Typing          complement(1005..2494)
                     /name="MOBP"
                     /typing="relaxase"
                     /tool="MOB-suite"
                     /identity="91.784"
                     /coverage="100.0"
                     /evalue="0.0"
ORIGIN
        1 tccgcccccc tgacgagtat cacgaaaatg acgctcaaat cagcggtggc gaaacccgat
       61 gcggcttaaa gataccaggc gtttccccct ggtggctccc tcgtgctccc ccgcattcct
      121 gcctttcggt ttaccggtgt cattccgctg ttatggccgc ggtttctcat tccacgcctg
      181 aaactcggtt ccgggtaggc agttcgctcc aggatggact gtatgcacga accccccgtt
      241 cagtccgact accacgcccg ttccggtaac tatcaacttg agtccaaccc ggaaagacac
      301 gacaaatcgc cagtggcggt agccattggt aactgggttc acggagcaga gattgtagag
      361 aatgcctaca gagttcttga agtgaaagcc tgagtgcggc tacactgaaa ggacagttta
      421 ggtatctgcg ctccgtgaaa gccagttacc atcggaacaa agagttggta gctctgaatt
      481 ccggcaaacg aaccaccgtt ggtagcggtg gtttttttgt ttacagggaa aaagattacg
      541 cgcagaaaga aaggatctca aggaaatcct tttgctttgg ccaatatgct tcggtaaaaa
      601 gttaatgcgc agaagatttt gaaaaaatat taataaccaa aactccaacg caaataagga
      661 acattcctgc aattgcgggc caatcaagtt tttgaccgct aaccaaccaa ccagctaggc
      721 ttattagtac aattcccgca ccagaccaaa ttgcgtaagc aataccggta ggtatatttt
      781 ccaatgtttg ggaaagcaga taaaaggcag cgcaataact tattgcagtt cctacagacg
      841 gccacaggcg tgtaaatcct tctgaatatt tcataaaggt ggtgcctatg acttcagcca
      901 caatagcccc tcccaggaaa atatatgtat tcataaaaat acctcatgtt gaaaaattta
      961 aatatcttta cataacaact aattaataga acccggctta tcatagcgaa ggaccatgat
     1021 gctgccactg cgatcgttcc agctccagcg ctttctggtg ctgcaccgcc cgctcctgct
     1081 gccggtgagt ttctatcgcg ttcagccttt cgacaaccgg cgcagctgct cgctcaaact
     1141 ctgcacctgc ctgctcaaga ccgtgacgcg ctcgttcagc gccgcgttct cccgttgaat
     1201 aagaccagac atcgtccgcc attccgcgaa ggcgttctcc cactcgtcca gccttttcga
     1261 gtagtcctgc tgtagctgct ctaatgcgct cagcaactgt ttttccagct ccgtcatgtg
     1321 ctatttcccc gccagtatca tccagctcga gtcctctccg aactgtcccg cttccgggtt
     1381 caccctcacg cagcggcgtc tctgctcgcc gcaggtcgag agctgtacgc cgctgttcct
     1441 ctctgacagc atggcctgcg tgctcttctg ctcccggatg gtcgtatagt tctcgagtat
     1501 ctgctgcccc tgccaccaca gaatgcccgc gctcgacgct atcagcagcg cggagaccag
     1561 aacgatggtc agccacgtct ggctgaccat gcgcagcatc cctttcgtgc gctggctcat
     1621 ggctgaggac agcttccggt cgtggtcgag gatggcggcg ctgattctct tctcgctttc
     1681 gctcagttcc gctctgacag acttctcgtg ctcgctgaat gcggctttca gcatctcgcc
     1741 ggtagtctgc tgctgcgctt tcgatttctg ctctaagtcc ttcgccagcg ttaaaagact
     1801 gttcatagat ggctcccttc agtcggatgt ttcgcccccc gtccgggtcg gcaatgctga
     1861 tgctgctttt tgtggtgcgc accacctcaa aacctgcgct ttccagcgcc tcagtgacgt
     1921 cctgacgcgt tttcagctcc ccggatgagg caagggcaag caggccgctc gtaatcgcct
     1981 gggcggcttc ctgcttcgct tccggcagcg cggaaggcga gaccagcacc cgccggttct
     2041 ccggcgcgtt cgggtcatgc agccccagcc tgccgttcac tatggtctgc caggcatcga
     2101 tgcgcggacg gtcggcgcgg tcgtaatacg gctgtagccg cttgccggtc agaagctccg
     2161 tgttcgggat caggaagttc agctccagcc gccccttgtc ccggtgctca acccacagca
     2221 cgctgtactg gtctttatcg agtccgggca tcagaacccg ctcgaaactc gccatcagct
     2281 tttcgcgctg gccgggcggt aaatcctgtt cggcaaaaga cagaacgccg gaagtgtact
     2341 ttttggcgta gggcgaggcg tcgataagct cccggacttc atccggcttc ccctgcagaa
     2401 cgctggcgcc gtcgcgctgg cgatctttac ccagcagata atcgaccggc ccgccgccgc
     2461 cgccgcgccc ccgaggatga aacttaacga tcatcatcag cacccttttc cagtacggca
     2521 tgccgcaacc gctcgagtcc ggcatcgatg gccatcagcg cggcgacaat ctgcacgcgg
     2581 tcgtgtccgc ttccaccacc ggcgttaacc tggcgggcaa tctggttaag gttgttcccc
     2641 atgccggcaa gctgacgaag cagcgccggc gagatcgacg gaagtttgcc ggcgcgtgcg
     2701 ggcttctcgt ccaggcacgt ctgccgcatc caggccgcga gttgcttacc ctcgcagcgc
     2761 tccagcagac gccggtgctc gtcctcagtc acccacatgg tgagcatttt gctgcgtttg
     2821 tctgccaatc cggcctcctg ataacgccgg gacggacggg aaatcttttc ccggtcggca
     2881 cggtgttgga caagccgcag gcgcggcagt ggttttagcg ggtttcgggg cgcagccctg
     2941 aaccagtcac gtagcgctag cggagtgtat actggctaaa catgttatga cggagtggca
     3001 atttatgaaa gtgcttcatg tgacagggga aaaatgcggc tgccgggcgt aagtgcaaaa
     3061 tgcaggtggt gatgaaatga cgcctcctcg ctcactcggt cgctacgctc ctgccgtgag
     3121 actgcggcgg gcgttaccag ctcacagatt acgggataag caaatgccgc tcgaagcagg
     3181 aaaggccaag aaaaggatgc ggagttgccg tttttccata ggc
//
