LOCUS       NZ_LR890190             1916 bp    DNA     circular CON 18-JUN-2023
DEFINITION  Klebsiella pneumoniae strain INF133 isolate INF133 plasmid 2,
            complete sequence.
ACCESSION   NZ_LR890190
VERSION     NZ_LR890190.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA3357033
            Assembly: GCF_904863195.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Klebsiella/Raoultella group; Klebsiella.
REFERENCE   1
  AUTHORS   Hawkey,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-OCT-2020) THE UNIVERSITY OF MELBOURNE, 30 Flemington
            Rd, Australia
COMMENT     ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Date                   :: 06/18/2023 15:42:29
            Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline
            (PGAP)
            Annotation Method :: Best-placed reference protein set; GeneMarkS-2+
            Annotation Software revision      :: 6.5
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,716
            CDSs (total)                      :: 5,598
            Genes (coding)                    :: 5,449
            CDSs (with protein)               :: 5,449
            Genes (RNA)                       :: 118
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 84
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 149
            CDSs (without protein)            :: 149
            Pseudo Genes (ambiguous residues) :: 0 of 149
            Pseudo Genes (frameshifted)       :: 57 of 149
            Pseudo Genes (incomplete)         :: 96 of 149
            Pseudo Genes (internal stop)      :: 23 of 149
            Pseudo Genes (multiple problems)  :: 24 of 149
            ##Genome-Annotation-Data-END##
            REFSEQ INFORMATION: The reference sequence is identical to
            LR890190.1.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1916
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="INF133"
                     /isolate="INF133"
                     /isolation_source="wound swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /plasmid="2"
                     /geo_loc_name="Australia"
                     /collection_date="2013-07"
     gene            599..901
                     /locus_tag="JMX29_RS25245"
     CDS             599..901
                     /locus_tag="JMX29_RS25245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005161566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TM2 domain-containing protein"
                     /protein_id="WP_031942343.1"
                     /translation="MSSMVYCRGCGKEIHETAKSCPHCGATNASSGSGEKSRIAAALLA
                     FFLGGFGAHKFYLGKIGQGFLYLIFCWTFIPAIIAFIEFIIYLCDSDEKFARKYG"
                     /name="TM2 domain-containing protein"
     gene            complement(1160..1396)
                     /locus_tag="JMX29_RS25250"
     CDS             complement(1160..1396)
                     /locus_tag="JMX29_RS25250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001676031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WP_012772745.1"
                     /translation="MARLTNLTPAEKKFLDDAVAAAERASGKKLNQPNRHIVLNRARAQ
                     IELQRYADRQRALREDERQQSDFAWSRPRAPRR"
                     /name="hypothetical protein"
     Typing          complement(1562..1735)
                     /name="MOBP"
                     /typing="oriT"
                     /tool="MOB-suite"
                     /identity="100.0"
                     /coverage="100.0"
                     /evalue="2.5600000000000002e-86"
     Typing          2..495
                     /name="rep_cluster_2358"
                     /typing="replicon"
                     /tool="MOB-suite"
                     /identity="83.939"
                     /coverage="99.0"
                     /evalue="8.19e-131"
     Typing          1708..1916
                     /name="rep_cluster_2335"
                     /typing="replicon"
                     /tool="MOB-suite"
                     /identity="92.381"
                     /coverage="95.0"
                     /evalue="1.47e-78"
ORIGIN
        1 ggtggcgaaa cccgatgcgg cttaaagata ccaggcgttt ccccctggtg gctccctcgt
       61 gctcccccgc attcctgcct ttcggtttac cggtgtcatt ccgctgttat ggccgcgttt
      121 atctcattcc acgcctgaca ctcagttccg cgaaggcagt tcgctcctgg atggactgta
      181 tgcacgaacc ccccgttcag tccgactgct gcgccttatc cggtaactat catcttgagt
      241 ccaacccgga aagacacgac ttatcgccac tggcagcagc cactggtaac tgatttagag
      301 gagttagtct tgaagttatg cgcctgttaa ggctaaactg aaagaacaga tttggttact
      361 gcgctcctcg taagccagtt accacggttc aaagagttgc tgctctgaga accttcgaaa
      421 aaccgccttg cagggcggtt ttttcgttta cagagcaaga gattacgacg ccacagaaag
      481 gatctcaaga agatccttca ccgtaatgga aatctatcca atccgagcac ataggataca
      541 catcgttata aaacatcgga tattatgatc ccaattaaaa taagctcgag gataaaaaat
      601 gagttcaatg gtttactgcc gaggatgtgg caaggaaata cacgaaacag caaagtcatg
      661 cccgcactgc ggagccacaa acgcctcttc aggttcaggt gaaaaaagta gaatcgcagc
      721 cgcgctatta gcattcttcc ttggtggatt tggcgcacat aaattttact taggaaaaat
      781 aggacagggg ttcctgtatc taattttttg ctggacattc atacccgcga tcatcgcgtt
      841 tattgagttt attatttatc tatgcgattc cgatgaaaaa ttcgcacgaa aatatggcta
      901 actcatagca aaaaaaagcc ccctaagggc tttttttgta cctgacggtc agaccgatta
      961 aacataacat cccttgcccg cacccccgca ggcgccctca gcgcaatcct gctgcatcag
     1021 ggccgtttcc agcacctttc ctcaccagta tcccggaaaa acgcccctga tgatttctgc
     1081 gcgactgcat ggctatgcac gcaggtgaat ggcaggtgat ttcgcagcgt cagcaccact
     1141 aaaccgccaa aagccaaaat cagcggcgcg gcgcgcgcgg acgtgaccag gcaaaatcgg
     1201 actgctgccg ctcatcctca cgtaatgcac gctggcggtc ggcgtaacgc tgcaactcaa
     1261 tttgcgcacg cgctctgttc aggacgatgt gccggttagg ctgatttagc tttttacctg
     1321 acgctctttc agctgcggca acagcatcat caagaaattt tttctctgca ggcgtcaagt
     1381 ttgtcagtct ggccataacg ttctccagtc agaataaatc agcacagtct gccagacaca
     1441 gtagaaacga tgaagcgcca gcgacggtga aaggcagtca gaaacggtga acgggagcgg
     1501 attttaatcc ggtgccgtga ggcgttggac aagccgcagg cgcgtcatta gcttttagcg
     1561 ggtttcgggg cgcagccctg aaccagtcac gtagcgctag cggagtgtat actggctgac
     1621 tatgttggca cggatgtgga aatcagtgaa gtgcttcatg tagcaggaga aaaaaggcgg
     1681 caccagcgcg tcagcaggat atgtagtaca ggatatattc cgcttcctcg ctcactgact
     1741 cgctgcgctc ggtcgttcgg ctgcggcgag cggtgccggc ttacaggcgg ggcggaaatt
     1801 tcctgggaga taccaggaag gagcttaaca gggaagagat aaggccgcgg cgaagccgtt
     1861 tttccatagg ctccgccccc ctgacaaaca tcatgaaatc tgacgctcaa atcagt
//
