LOCUS       NZ_LR890188             3302 bp    DNA     circular CON 18-JUN-2023
DEFINITION  Klebsiella pneumoniae strain INF072 isolate INF072 plasmid 4,
            complete sequence.
ACCESSION   NZ_LR890188
VERSION     NZ_LR890188.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA3357068
            Assembly: GCF_904863145.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Klebsiella/Raoultella group; Klebsiella.
REFERENCE   1
  AUTHORS   Hawkey,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-OCT-2020) THE UNIVERSITY OF MELBOURNE, 30 Flemington
            Rd, Australia
COMMENT     ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Date                   :: 06/18/2023 15:43:03
            Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline
            (PGAP)
            Annotation Method :: Best-placed reference protein set; GeneMarkS-2+
            Annotation Software revision      :: 6.5
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,502
            CDSs (total)                      :: 5,379
            Genes (coding)                    :: 5,263
            CDSs (with protein)               :: 5,263
            Genes (RNA)                       :: 123
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 87
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 116
            CDSs (without protein)            :: 116
            Pseudo Genes (ambiguous residues) :: 0 of 116
            Pseudo Genes (frameshifted)       :: 51 of 116
            Pseudo Genes (incomplete)         :: 63 of 116
            Pseudo Genes (internal stop)      :: 25 of 116
            Pseudo Genes (multiple problems)  :: 20 of 116
            ##Genome-Annotation-Data-END##
            REFSEQ INFORMATION: The reference sequence is identical to
            LR890188.1.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..3302
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="INF072"
                     /isolate="INF072"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /plasmid="4"
                     /geo_loc_name="Australia"
                     /collection_date="2013-05"
     gene            720..2252
                     /locus_tag="JMV85_RS27380"
     CDS             720..2252
                     /locus_tag="JMV85_RS27380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017899153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NERD domain-containing protein"
                     /protein_id="WP_064161748.1"
                     /translation="MKKSVVRQVLEMSGPCISSDLAERIQWQHPSMSPEAIRKMISRST
                     DIGKLPFLKFSHNRRFIYLKDDFGSFKFWRALEKCMYEANSTYSHAILAVINNGGYLKV
                     KDFGIVSGSPIKQAKHLSYETVLRNLLSAKILRSVYIDGVGDCVLINNNIANDVNIRTM
                     ANCESFFDKPILELVKAWLRNLGLVAFNQIKTKYDGEGNPVVGSFEWDMTAPSYVSPLA
                     EYVGGKLMPGFVACDFSLGFNRDEITTAAAETFIRKVQMTKSSRASQRIMFVIFARRFG
                     KIAFNKLRSEGVLAVTIANAFGNKVDESLTRLSRVVQGSLSIEKHPDELLQMVKDLESV
                     SGENGNLRGYIFELFVSSQISNFYGLGNIYINREYKINGKHAEADVVLESSDDIYIIEC
                     KNVKVLPSTELTRWMKERVPTINSYYKINNLEKKNIHHYLWVTGNVYNKDLKRLDSFKS
                     NNKNIDVDYLFGEHLDDFFYKKKRVFNLYRKVISPDYKKGVMPDFELEDDFF"
                     /name="NERD domain-containing protein"
     Typing          complement(2301..2781)
                     /name="rep_cluster_2358"
                     /typing="replicon"
                     /tool="MOB-suite"
                     /identity="96.687"
                     /coverage="91.0"
                     /evalue="0.0"
ORIGIN
        1 agtcggtaac gactcagaac tataaaaaca ataagttaat aacgacccga ctctagaccc
       61 gactccccgt ttggttgttt tttagacgcg gcgactctgg gtacgactct agtgaagagt
      121 cgccggtgaa tcgtgtggtg agtcgtccgg cgacttgcca taacgtgatt gccggccgtc
      181 gacgaaccgg attcctgaac gtgctgaaaa ccggttttcc ggctgcgccg gcaacgcttc
      241 acggccacgc aataaattgc gtccccgttc accgttttcg gagtagaaga acgccggaaa
      301 caggacttac cttggctgaa tggtgtcaat ttccgcgcta tgcacttgtg cgcatactca
      361 tgcatgccgt aaaaacagag cctgtgcgtt tctggcgggt tttcgggtgg tttgttgcct
      421 gttttgccgg tttcccgtca gaaacgctct gagggcctct caggcggtgc tgataacgga
      481 tgttatggta aatggagtag ctgatagttc gataaaaaaa tgtcacaaaa ctatctttat
      541 gatttaaaag gattaaataa ttataaagac gatatttctt tgtgcttaat ttaaagtaag
      601 tagttaacca tatgatttta aattgttttt tatagtcact tttttttaaa aagactgcgc
      661 gccattacac gtagtgtaat gttataaata gcgtagtgtg acagaaataa ggtgaggcta
      721 tgaaaaaaag tgttgttaga caagtgcttg aaatgagcgg gccatgcatc tcttcagatc
      781 ttgcagagag aattcagtgg caacatccct caatgtcccc tgaagcgata cgtaaaatga
      841 tctcgcgaag cacggacata ggtaagctgc catttttgaa attcagccat aacaggagat
      901 tcatttatct aaaagatgat tttggcagtt tcaaattttg gcgagctctc gaaaagtgca
      961 tgtacgaagc aaactcaact tactcacacg cgatacttgc cgtaataaat aatggcggtt
     1021 atttgaaggt gaaagatttt gggattgtgt ctggatctcc tataaaacaa gctaaacatt
     1081 taagttatga aacagttcta agaaatctac tttcggcaaa aatacttaga tctgtgtata
     1141 ttgatggagt tggtgattgc gtactgataa ataacaacat agccaacgat gttaatatta
     1201 gaacaatggc aaattgcgaa tccttttttg acaaaccaat attggagctt gttaaagctt
     1261 ggttgaggaa tttaggcctg gtcgctttta atcagataaa aacaaaatac gatggggagg
     1321 gaaatccagt tgtaggctct tttgaatggg atatgaccgc tccaagttac gtttcccctc
     1381 tcgctgaata tgtcggcgga aaactgatgc ctggtttcgt tgcctgtgat ttttctctcg
     1441 gctttaatcg tgatgaaatt actaccgctg cagcagaaac attcataaga aaagtccaga
     1501 tgactaagtc ttctcgagcg agtcagagga taatgtttgt tattttcgca aggcgtttcg
     1561 gcaaaatagc cttcaataag ttgagaagtg agggggttct ggctgtaact atagcaaatg
     1621 cgtttggtaa taaagttgat gaaagcttaa ccaggttgtc gagggtggtt cagggttctt
     1681 tgtccattga aaagcatcca gatgagttgc ttcagatggt taaagatctg gagtctgttt
     1741 ctggagagaa tggcaatttg agagggtata tttttgagct ttttgtatcc tcgcaaattt
     1801 ctaattttta tggtcttggt aatatttaca ttaatagaga gtataagata aatggtaagc
     1861 atgcagaagc tgatgttgta ttagagagta gtgacgatat ttatataata gagtgcaaaa
     1921 atgttaaggt cttaccttca actgaactta cgcgttggat gaaagaaagg gttccaacta
     1981 taaactctta ctataaaata aataatttag aaaaaaagaa tatccaccat tatttgtggg
     2041 ttacaggtaa tgtgtacaac aaagatttaa aaaggttaga ctcttttaag agtaataata
     2101 agaatatcga tgttgattat ttgtttggtg agcatttgga tgatttcttt tacaagaaaa
     2161 agcgggtgtt caacttatat agaaaagtca tttcacctga ttataaaaaa ggcgtaatgc
     2221 ctgattttga gttagaggac gattttttct agctactgcg tttcttgacg atggcgcttt
     2281 gaaaggcgta tcttccatct ctgaaacgaa aaaaccaccc ggcaaggtgg tttttcgaag
     2341 gttcaggaaa ccggcaagtt tctgaaccgt ggtaactggc ttaaacggag cgcagtgacc
     2401 aaatctgtcc ttccagtgta gccgtagtca ggtcaacact tcaagaactc tgtgtatgct
     2461 tgtacacgcc tctccgctcc gtaaaccaga taccaatggc tgctgccagt ggcgttttgt
     2521 cgtgtctttc cgggttggac tcaagtcgat agttaccgga acaggcgcag cagtcggact
     2581 gaacgggggg ttcgtgcata cagtccagct tggagcgaac tgccttcccg gaactgagtg
     2641 tcaggcgtgg aatgagataa acgcggccat aacagcggag tgacaccggt aaaccgaaag
     2701 gcaggaacag gagagcgcac gagggagccg cctatcagaa atgataggta tctttatagt
     2761 cctgtcgggt ttcgccacca ctgatttgag tgtcagattt cgtgatgctt gtcagggggg
     2821 cggagcctat ggaaaaacgg ccgctgtgcg gcctttcctt ttccacatca cgcgaccgct
     2881 cggttttctc gagcgtttct acgcacgctc ctgccgctcg ccgcagccga acggcaggag
     2941 cgtagcgact gagtgagcga ggaagcggaa aagagtctgg ttttacattg agcactgacg
     3001 ctccgaggcc ccttatgact aaacaacaga agaccgcgct gaatatggca aaatatatcc
     3061 agagccagtc cctgttttcc tgtccggcca tcccggggag ttcctgaacc ttcccaaaaa
     3121 tcgtcagatc tctgaacgct cctcaccacg aaaaataccc acacactacg caaaattaaa
     3181 attttgcaga tttttattta atatcagtgg tttaccttcc tgaaatttcg ttttttaaat
     3241 tttatttata tagatccgac tctatgacga ctcgtcatag agtccccggc gagtcgttat
     3301 ag
//
