LOCUS       NZ_KX011076             2366 bp    DNA     circular CON 20-JUL-2023
DEFINITION  Staphylococcus aureus strain SA7112 plasmid pSA7112-1, complete
            sequence.
ACCESSION   NZ_KX011076
VERSION     NZ_KX011076.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN14227181
KEYWORDS    RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus.
REFERENCE   1  (bases 1 to 2366)
  AUTHORS   Moreno,L.Z., Dutra,M., Moreno,M., Ferreira,T.S., Faria,G.,
            Silva,A.P.S. and Moreno,A.M.
  TITLE     First report of vancomycin-intermediate LA-MRSA ST398/t9538 in
            Brazil
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2366)
  AUTHORS   Moreno,L.Z., Dutra,M., Moreno,M., Ferreira,T.S., Faria,G.,
            Silva,A.P.S. and Moreno,A.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (31-MAR-2016) Preventive Veterinary Medicine and Animal
            Health, School of Veterinary Medicine and Animal Science -
            University of Sao Paulo, Avenue Prof. Dr. Orlando Marques de Paiva,
            87, Sao Paulo, Sao Paulo 05508-270, Brazil
COMMENT     ##Assembly-Data-START##
            Assembly Method :: CLC NGS Cell v. 7.5.1; Geneious v. 8.0
            Sequencing Technology        :: Illumina
            ##Assembly-Data-END##
            ##Genome-Annotation-Data-START##
            Annotation Provider          :: NCBI RefSeq
            Annotation Date              :: 07/20/2023 02:18:05
            Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline
            (PGAP)
            Annotation Method :: Best-placed reference protein set; GeneMarkS-2+
            Annotation Software revision :: 6.5
            Features Annotated           :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                :: 2
            CDSs (total)                 :: 2
            Genes (coding)               :: 2
            CDSs (with protein)          :: 2
            Genes (RNA)                  :: 0
            tRNAs                        :: 0
            ncRNAs                       :: 0
            Pseudo Genes (total)         :: 0
            CDSs (without protein)       :: 0
            ##Genome-Annotation-Data-END##
            REFSEQ INFORMATION: The reference sequence is identical to
            KX011076.1.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2366
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /strain="SA7112"
                     /isolation_source="Skin swab"
                     /db_xref="taxon:1280"
                     /plasmid="pSA7112-1"
                     /geo_loc_name="Brazil"
     gene            230..706
                     /locus_tag="HTH52_RS00005"
     CDS             230..706
                     /locus_tag="HTH52_RS00005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000664727.1"
                     /GO_process="GO:0006260 - DNA replication [Evidence IEA];
                     GO:0006276 - plasmid maintenance [Evidence IEA]"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication/maintenance protein RepL"
                     /protein_id="WP_000664727.1"
                     /translation="MKERYGTVYKGSQRLIDEESGEVIEVDKLYRKQTSGNFVKAYIVQ
                     LISMLDMIGGKKLKIVNYILDNVHLSNNTMIATTREIAKATGTSLQTVITTLKILEEGN
                     IIKRKTGVLMLNPELLMRGDDQKQKYLLLEFGNFEQEANEKQENALSDYYSFKD"
                     /name="replication/maintenance protein RepL"
     gene            1414..2148
                     /gene="erm(C)"
                     /locus_tag="HTH52_RS00010"
     ARG             1415..2145
                     /name="erm(C)"
                     /gene="erm(C)"
                     /gene_name="23S rRNA (adenine(2058)-N(6))-methyltransferase
                     Erm(C)"
                     /tool="amrfinderplus"
                     /drug_class="LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN"
                     /identity="100.0"
                     /coverage="100.0"
     ARG             1415..2148
                     /name="ErmC"
                     /gene="ErmC"
                     /gene_name="Erm 23S ribosomal RNA methyltransferase"
                     /tool="rgi"
                     /drug_class="macrolide antibiotic; lincosamide antibiotic;
                     streptogramin antibiotic; streptogramin A antibiotic;
                     streptogramin B antibiotic"
                     /identity="99.59"
                     /coverage="100.0"
     Typing          231..716
                     /name="rep_cluster_1947"
                     /typing="replicon"
                     /tool="MOB-suite"
                     /identity="99.591"
                     /coverage="100.0"
                     /evalue="0.0"
ORIGIN
        1 gggtagcatt tacgttagat aaccccctga tatgctccga cgctttatat agaaaagaag
       61 attcaactag gtaaaatctt aatataggtt gagatgataa ggtttataag gaatttgttt
      121 gttctaattt ttcactcatt ttgttctaat ttcttttaac aaatgttctt ttttttttag
      181 aacagttatg atatagttag aatagtttaa aataaggagt gagaaaaaga tgaaagaaag
      241 atatggaaca gtctataaag gctctcagag gctcatagac gaagaaagtg gagaagtcat
      301 agaggtagac aagttatacc gtaaacaaac gtctggtaac ttcgtaaagg catatatagt
      361 gcaattaata agtatgttag atatgattgg cggaaaaaaa cttaaaatcg ttaactatat
      421 cctagataat gtccacttaa gtaacaatac aatgatagct acaacaagag aaatagcaaa
      481 agctacagga acaagtctac aaacagtaat aacaacactt aaaatcttag aagaaggaaa
      541 tattataaaa agaaaaactg gagtattaat gttaaaccct gaactactaa tgagaggcga
      601 cgaccaaaaa caaaaatacc tcttactcga atttgggaac tttgagcaag aggcaaatga
      661 aaaacaagaa aatgcattat ctgattatta ttctttcaag gactagtata acataaaatc
      721 gtctacaaat agacaaaaaa cctgcacgct taatgtagat caaaagctta acgcaaatga
      781 aatagattga cctcccaata acaccacgta gttattggga ggtcaatcta tgaaatgcga
      841 ttaagctttt tctaattcac ataagcgtgc aggtttaaag tacataaaaa atataatgaa
      901 aaaaagcatc attatactaa cgttatacca acattatact ctcattatac taattgctta
      961 ttccaatttc ctattggttg gaaccaacag gcgttagtgt gttgttgagt tggtactttc
     1021 atgggattaa tcccatgaaa cccccaacca actcgccaaa gctttggcta acacacacgc
     1081 cattccaacc aatagttttc tcggcataaa gccatgctct gacgcttaaa tgcactaatg
     1141 ccttaaaaaa acattaaagt ctaacacact agacttattt acttcgtaat taagtcgtta
     1201 aaccgtgtgc tctacgacca aaagtataaa acctttaaga actttctttt ttcttgtaaa
     1261 aaaagaaact agataaatct ctcatatctt ttattcaata atcgcatcag attgcagtat
     1321 aaatttaacg atcactcatc atgttcatat ttatcagagc tcgtgctata attatactaa
     1381 ttttataagg aggaaaaaat aaagagggtt ataatgaacg agaaaaatat aaaacacagt
     1441 caaaacttta ttacttcaaa acataatata gataaaataa tgacaaatat aagattaaat
     1501 gaacatgata atatctttga aatcggctca ggaaaagggc attttaccct tgaattagta
     1561 cagaggtgta atttcgtaac tgccattgaa atagaccata aattatgcaa aactacagaa
     1621 aataaacttg ttgatcacga taatttccaa gttttaaaca aggatatatt gcagtttaaa
     1681 tttcctaaaa accaatccta taaaatattt ggtaatatac cttataacat aagtacggat
     1741 ataatacgca aaattgtttt tgatagtata gctgatgaga tttatttaat cgtggaatac
     1801 gggtttgcta aaagattatt aaatacaaaa cgctcattgg cattattttt aatggcagaa
     1861 gttgatattt ctatattaag tatggttcca agagaatatt ttcatcctaa acctaaagtg
     1921 aatagctcac ttatcagatt aaatagaaaa aaatcaagaa tatcacacaa agataaacag
     1981 aagtataatt atttcgttat gaaatgggtt aacaaagaat acaagaaaat atttacaaaa
     2041 aatcaattta acaattcctt aaaacatgca ggaattgacg atttaaacaa tattagcttt
     2101 gaacaattct tatctctttt caatagctat aaattattta ataagtaagt taagggatgc
     2161 ataaactgca tcccttaact tgtttttcgt gtacctattt tttgtgaatc gattatgtct
     2221 tttgcgcatt cacttctttt ctatataaat atgagcgaag cgaataagcg tcggaaaagc
     2281 agcaaaaagt ttcctttttg ctgttggagc atgggggttc agggggtgca gtatctgacg
     2341 tcaatgccga gcgaaagcga gccgaa
//
