LOCUS       NZ_KJ190020             2683 bp    DNA     linear   CON 20-JUL-2023
DEFINITION  Proteus mirabilis strain M1510 plasmid pM510, complete sequence.
ACCESSION   NZ_KJ190020
VERSION     NZ_KJ190020.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN14226742
KEYWORDS    RefSeq.
SOURCE      Proteus mirabilis
  ORGANISM  Proteus mirabilis
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Morganellaceae; Proteus.
REFERENCE   1  (bases 1 to 2683)
  AUTHORS   Wei,T., Miyanaga,K. and Tanji,Y.
  TITLE     Persistence of antibiotic-resistant and -sensitive Proteus mirabilis
            strains in the digestive tract of the housefly and green bottle
            flies
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2683)
  AUTHORS   Wei,T., Miyanaga,K. and Tanji,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (22-JAN-2014) Department of Bioengineering, Graduate
            School of Bioscience and Biotechnology, Tokyo Institute of
            Technology, 4259 J2-15 Nagatsuta-cho, Midori-ku, Yokohama 226-8501,
            Japan
COMMENT     ##Assembly-Data-START##
            Assembly Method              :: DNAMAN v. 4.0
            Sequencing Technology        :: Sanger dideoxy sequencing
            ##Assembly-Data-END##
            ##Genome-Annotation-Data-START##
            Annotation Provider          :: NCBI RefSeq
            Annotation Date              :: 07/20/2023 02:06:23
            Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline
            (PGAP)
            Annotation Method :: Best-placed reference protein set; GeneMarkS-2+
            Annotation Software revision :: 6.5
            Features Annotated           :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                :: 2
            CDSs (total)                 :: 2
            Genes (coding)               :: 2
            CDSs (with protein)          :: 2
            Genes (RNA)                  :: 0
            tRNAs                        :: 0
            ncRNAs                       :: 0
            Pseudo Genes (total)         :: 0
            CDSs (without protein)       :: 0
            ##Genome-Annotation-Data-END##
            REFSEQ INFORMATION: The reference sequence is identical to
            KJ190020.1.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2683
                     /organism="Proteus mirabilis"
                     /mol_type="genomic DNA"
                     /strain="M1510"
                     /isolation_source="housefly"
                     /db_xref="taxon:584"
                     /plasmid="pM510"
     gene            1094..1738
                     /locus_tag="HTB73_RS00005"
     CDS             1094..1738
                     /locus_tag="HTB73_RS00005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_032495680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinolone resistance pentapeptide repeat protein
                     QnrD1"
                     /protein_id="WP_012634451.1"
                     /translation="MEKHFINEKFSRDQFTGNRVKNIAFSNCDFSGVDLTDTEFVDCSF
                     YDRNSLEGCDFNRAKLKNASFKSCDLSMSNFKNISALGLEISECLAQGADFRGANFMNM
                     ITTRSWFCSAYITKTNLSYANFSRVILEKCELWENRWNGTVITGAVFRGSDLSCGEFSS
                     FDWSLADFTGCDLTGGALGELDARRINLDGVKLDGEQALQLVESLGVIVHR"
                     /name="quinolone resistance pentapeptide repeat protein
                     QnrD1"
     gene            2376..>2683
                     /locus_tag="HTB73_RS00010"
     CDS             2376..>2683
                     /locus_tag="HTB73_RS00010"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WP_172685341.1"
                     /translation="MSQLFRLASPEDYEYIEELNLWELSFDKRPVQGVRCEDPVIGAEK
                     YNQGREKFKALASRHKKHWKPNGLTFSELIRWAIECGTPEQCQLVLALYHCTNDDDY"
                     /name="hypothetical protein"
     ARG             1095..1735
                     /name="qnrD1"
                     /gene="qnrD1"
                     /gene_name="quinolone resistance pentapeptide repeat
                     protein QnrD1"
                     /tool="amrfinderplus"
                     /drug_class="QUINOLONE"
                     /identity="100.0"
                     /coverage="100.0"
     Typing          845..1000
                     /name="Col3M"
                     /typing="replicon"
                     /tool="MOB-suite"
                     /identity="98.089"
                     /coverage="100.0"
                     /evalue="2.29e-71"
ORIGIN
        1 ggcgatggga attcagttaa gccgaagtat tgataatgca aatgtcagtc cgatcatctt
       61 tttcacaggt aaaaatcaac ggttattagg tgatatttcg atgctaaaac agctcgaaga
      121 aaaggtgcgc tgacgttagg tttacctatt attttatgta ttatcctatc tattattcta
      181 tctcttattt tatctatttc gtctgtaata ggtagaataa tacatagaat aagatacaga
      241 ataatagata gacacaagat gacgttgtgt tatttcttac ccattaatcc acctgttatt
      301 ctacctatta ctttacccgt tattgcaccc aatttaggta taacgggcag aataacgggt
      361 gaaataatgg gtagaatcat agttttacta acttgcaccc catgatactt tcagtatcaa
      421 tgccactcat tttctggacg aaaatgaatg acataaggct ccgccctctg gctattttct
      481 tcggctggac gcctgcgaaa aaaaccattc acccaagccc gtcaaactca ctgcgttcgt
      541 ctgaccaccc ccttttttcg cccctgtatt tggtcgctca aaaatgtggt ggtcagacgc
      601 ttcgcttgac ggggggcttt gcccccaaaa cgaaacacgt tcactggggt tcacttgcca
      661 tcgctggggc gtgtcatttc gtttcggctc cccctgtttt tccctttctt cgctggacgc
      721 tcatcaggat aaaaacaaaa agcctaccgc cctcgtttta ctcggttggt caaatcgctt
      781 cttgccacaa aacaagtttg tgactttcag cgatttcgca tcgttttact tgtcagtttg
      841 cacgatgtta aaaacgcact cagaagcccg caaaaccgtt ctaaactttc agcgtagatt
      901 tgggtgtttt atagggtgat cgtgtcttaa aatcgtttcg aggggcttta atggggatga
      961 acgggaggtt tttgctaact aactcgcccg tttaacataa aagggattgt atgaatcaat
     1021 tttagctaga gtttaaggtt gttcaaatta atgtacaatg attgcactgt ataaataacc
     1081 aggtgtagca tgtatggaaa agcactttat caatgaaaag ttttcacgag atcaatttac
     1141 ggggaataga gttaaaaata ttgccttttc aaattgtgat ttttcagggg ttgatttaac
     1201 tgatactgaa tttgttgatt gtagttttta cgacaggaat agcttggaag ggtgtgattt
     1261 taatagagcc aaactaaaaa acgctagctt taaaagctgc gatttatcaa tgagtaattt
     1321 taaaaacatt agcgccttag gtcttgaaat tagtgagtgt ttagctcaag gagctgattt
     1381 tcgaggggct aattttatga atatgataac tacaaggtca tggttttgta gtgcttatat
     1441 aaccaagaca aatcttagtt acgctaattt ttctagagtc atattagaaa agtgcgaact
     1501 gtgggaaaat cgctggaatg gcactgtgat aactggcgcc gtgtttcgtg gctccgatct
     1561 ttcttgtggg gagttttcat cgtttgattg gtctttggct gattttactg gttgtgattt
     1621 aacgggtggg gcgcttggcg agcttgatgc aaggcgaatt aatttagatg gagtgaagtt
     1681 ggatggagag caggcgcttc agcttgttga gagtttaggt gttattgttc accgataaaa
     1741 tctaggtaaa aaacgcctaa tgccccaatg tggtactaat caaaacggag cgaagcgaca
     1801 tcttcatctt gtctttgctt ttctccatga tcagttattg ggtcatggtc tcttagctcg
     1861 ttaatctggc taagtttggt taggttgggc ttctttcgac acttcgcaat ccaagaaatc
     1921 cctagtccgt tgattggtgc tcttatcagg tacgcactgt aatctttcga taccgcagcg
     1981 tgattcggag gtagagccgg aatttcgttt tccggtacgt tttactacca caatttgcct
     2041 gtttatcctt tcggagaccg ggctaagtcc gagtcaatca agtggtgcat ttgggttaat
     2101 gtcgttggct ggtatttaat gagaacgtga caagcgcctc tcacgttgct aagattggat
     2161 tgcgacgtct aatctgagca acgaatgcac aagatttaga gtaccagagc cctgtgatgc
     2221 tgtcacgggg ctttgttaca tctggagctt ggtaaacctc ataaattcaa ttcgcaacgc
     2281 tcgccgcaag gcgtgaactt gtttcacgtc gaggaagcgg aatttctcga aagccttata
     2341 ctgtctccgt tcacacatga tcggagggtg tctctatgtc tcaattattt cgtttggcat
     2401 cgccagaaga ttacgaatac atcgaagaat taaatttatg ggaattgtca tttgataagc
     2461 gaccggttca aggggttcgt tgtgaagatc cggtgatcgg ggcagaaaaa tataatcaag
     2521 ggcgtgaaaa atttaaggcg ttagcgtcac ggcataaaaa acactggaaa ccgaacggat
     2581 tgaccttttc ggagttgatc cgctgggcaa tagaatgcgg aactccagaa caatgtcagc
     2641 ttgttttagc gttataccat tgcacaaacg atgatgatta tca
//
