LOCUS       NZ_EU333812             3332 bp    DNA     circular CON 20-JUL-2023
DEFINITION  Staphylococcus aureus strain JY11 plasmid pKH18, complete sequence.
ACCESSION   NZ_EU333812
VERSION     NZ_EU333812.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN14225721
KEYWORDS    RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus.
REFERENCE   1  (bases 1 to 3332)
  AUTHORS   Moon,K.H., Lee,J.Y. and Park,J.H.
  TITLE     Characterization of Antibiotic Resistance Plasmids of Staphylococcus
            aureus by Complete Nucleotide Sequence Determination
  JOURNAL   Yakhak Hoeji 52 (2), 147-150 (2008)
REFERENCE   2  (bases 1 to 3332)
  AUTHORS   Moon,K.H., Lee,J.Y. and Park,J.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-DEC-2007) Pharmacy, Kyungsung University, 110-1,
            Daeyun-dong, Nam-gu, Busan 608-736, Korea
COMMENT     ##Genome-Annotation-Data-START##
            Annotation Provider          :: NCBI RefSeq
            Annotation Date              :: 07/20/2023 01:59:22
            Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline
            (PGAP)
            Annotation Method :: Best-placed reference protein set; GeneMarkS-2+
            Annotation Software revision :: 6.5
            Features Annotated           :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                :: 3
            CDSs (total)                 :: 3
            Genes (coding)               :: 3
            CDSs (with protein)          :: 3
            Genes (RNA)                  :: 0
            tRNAs                        :: 0
            ncRNAs                       :: 0
            Pseudo Genes (total)         :: 0
            CDSs (without protein)       :: 0
            ##Genome-Annotation-Data-END##
            REFSEQ INFORMATION: The reference sequence is identical to
            EU333812.1.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..3332
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /strain="JY11"
                     /db_xref="taxon:1280"
                     /plasmid="pKH18"
                     /note="similar to plasmid pC55s"
     gene            874..1491
                     /gene="cadD"
                     /locus_tag="HS468_RS00005"
     ARG             875..1488
                     /name="cadD"
                     /gene="cadD"
                     /gene_name="cadmium resistance transporter CadD"
                     /tool="amrfinderplus"
                     /drug_class="CADMIUM"
                     /identity="100.0"
                     /coverage="100.0"
     gene            1510..1857
                     /locus_tag="HS468_RS00010"
     CDS             1510..1857
                     /locus_tag="HS468_RS00010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020366422.1"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA];
                     GO:0003700 - DNA-binding transcription factor activity
                     [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metalloregulator ArsR/SmtB family transcription
                     factor"
                     /protein_id="WP_000119690.1"
                     /translation="MSYENTCDVICVHEDKVNNALSFLEDDKSKKLLNILEKICDEKKL
                     KIILSLIKEDELCVCDISLILKMSVASTSHHLRLLYKNEVLDFYKDGKMAYYFIKDDEI
                     REFFSKNHEGF"
                     /name="metalloregulator ArsR/SmtB family transcription
                     factor"
     gene            2048..3043
                     /locus_tag="HS468_RS00015"
     CDS             2048..3043
                     /locus_tag="HS468_RS00015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001199895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein rep"
                     /protein_id="WP_001199887.1"
                     /translation="MQYNTTRSITENQDNKTLKDMTKSGKQRPWREKKIDNVSYADILE
                     ILKIKKAFNVKQCGNILEFKPTDEGYLKLHKTWFCKSKLCPVCNWRRAMKNSYQAQKVI
                     EEVIKEKPKARWLFLTLSTKNAIDGDTLEQSLKHLTKAFDRLSRYKKVKQNLVGFMRST
                     EVTVNKNDGSYNQHMHVLLCVENAYFRKKENYITQEEWVNLWQRALQVDYRPVANIKAI
                     KPNKKGDKDIESAIKETSKYSVKSSDFLTDDDEKNQEIVSDLEKGLYRKRMLSYGGLLK
                     QKHKILNLDDAEDGNLINTSDEDKTTDEEEKAHSITAIWNFEKQNYYLRH"
                     /name="protein rep"
     Typing          2049..3043
                     /name="rep_cluster_1017"
                     /typing="replicon"
                     /tool="MOB-suite"
                     /identity="100.0"
                     /coverage="100.0"
                     /evalue="0.0"
ORIGIN
        1 gaatttagaa aaacatgggg aagttttaaa gaattttatg ctcattttta atttgcatgt
       61 aaatgggcag tgtctaaaaa actcgacact ggttttactc gaattttagt ttgtgaaatt
      121 aagatatatt tatttggctc atatttgcgt tttaaaagtt tatgtaggtt tttaggtata
      181 aaactatatg atttacccat aaatctttaa aatgacctct taaaattcaa aataaaggca
      241 tttaaaaatt aacaaaataa aaaagctact agcaaaaaac tagtagcttt tgtcttgatg
      301 tagtattaat ttttatatct gcgccacaac gccgatttct taaaacgaat ataaaaaatc
      361 gacgaaggtc gattatggtt tttgcacgcg ttcttttaga acgcataagt gcgcccttac
      421 gggatttaac tagattataa cgacgaaaaa cagacctgta aagcaataac aattaggtct
      481 accaggtaga taaagtgtac aaagtagaac cgaaaaagtt atttattttg aagatttttc
      541 gtagatataa tttgctaata aacttcctaa aactgaataa agaaaaatag ttaaactcat
      601 gtaatcactc cataattctg aagtgtctcc atgtctacgc atagacacgc atttatgccg
      661 agaaaattta ttgtgcgttg agaagaaccc ttaactaaac ttgcagacga atgtcggcat
      721 agcgtgagct attaagccga ccattcgaca agttttggga ttgttaaggg ttccgaggct
      781 caacgtcaat aaagcaattg gaataaagca cctatgatta tttaaaaata taagttataa
      841 tacattcaaa aatatttttg aatgaggtgt attatgattc aaacggttgt tgctgctgct
      901 gttctttata ttgctacagc agttgattta ttagtaattt tattaatatt ttttgctaga
      961 gcaaagacta gaaaagaata tagagatatt tatgttggtc aatatttagg gtctattatt
     1021 ttaatattag ttagtttgtt tttagctttt gtattaaatt atgttccaga aaagtggata
     1081 ttaggtttat tgggtttaat accaatttat cttggaatta aagtggctat ttatgatgat
     1141 tgtgaaggag aaaagagagc taaaaaagaa ttgaatgaaa aaggattgtc taaattagtt
     1201 ggtacggttg caattgttac gatagcaagt tgtggcgccg ataatattgg tttatttgtt
     1261 ccgtattttg tgacattaag tgttactaat ttattactta ctctgtttgt ctttttaatt
     1321 ttaattttct tcttggtgtt tactgcacaa aaattagcta atatcccagg aattggagaa
     1381 attgttgaga aatttagtcg ttggattatg gctatcattt atatagcttt aggtttattt
     1441 attattattg aaaatgacac tattcaaaca attttaggat ttatatttta atttagggtg
     1501 tgattttata tgagttatga aaatacttgt gatgtgatct gtgtacatga ggataaagtt
     1561 aacaatgctt taagtttttt agaagatgat aaatctaaga aattacttaa cattttagaa
     1621 aaaatttgtg atgagaagaa attgaaaatc atattatctt tgattaaaga agatgagttg
     1681 tgtgtttgtg atatttcttt gatattgaaa atgagtgttg cttcaacttc acatcattta
     1741 aggcttttat ataaaaatga ggtacttgat ttttataaag atggaaagat ggcatattat
     1801 tttattaaag acgatgaaat aagagagttt ttctctaaaa atcatgaggg tttttgaaac
     1861 gagtgaaacg agtttcttct tgtcttgata ctatatagaa ataactcgat tttatatata
     1921 cagctgtaac tgttgatatt acagcgttta aacgtgtttt tgtgcgtgaa aggaaaattt
     1981 gacaataaaa aaccccagtt atattattaa ggtgtcgaat cttaaataat actgggggtc
     2041 tttttatatg caatataata ctactagaag tataaccgaa aatcaagata ataaaacgtt
     2101 aaaagatatg acgaaaagtg ggaaacaacg cccatggaga gaaaagaaaa tagataatgt
     2161 aagctatgca gatatactag aaattttaaa aatcaaaaag gcttttaatg taaaacaatg
     2221 tggtaatatt ttagaattta agccaactga tgaaggttat ttgaagttac ataagacatg
     2281 gttttgtaaa tcaaaattat gtccggtttg taattggaga cgtgctatga aaaatagtta
     2341 tcaagctcaa aaagtgattg aagaagtaat taaggaaaag ccaaaagcac gttggttgtt
     2401 tttaacactt tcaacaaaaa atgcgataga tggagatact ttagaacaaa gtttgaagca
     2461 tctaactaaa gcatttgata ggttgagtag atataaaaag gttaaacaaa atcttgttgg
     2521 atttatgcgt tcaacagaag ttaccgttaa taaaaatgac ggtagttata atcagcatat
     2581 gcacgttttg ttatgtgttg aaaatgcata ttttagaaaa aaagagaatt atataactca
     2641 agaagaatgg gttaatttat ggcaaagagc attgcaagtt gattatcgac ctgttgctaa
     2701 tattaaagcg atcaaaccaa ataaaaaagg cgataaagat attgaatctg caatcaaaga
     2761 gacctcaaaa tattcggtta aatcatctga ttttttaact gatgatgatg aaaaaaatca
     2821 agaaattgta agtgatttag aaaaaggttt gtatcgaaag cgtatgttaa gttatggtgg
     2881 attgctgaaa caaaagcata aaattttaaa cttagacgat gctgaagatg gaaatttgat
     2941 taatacaagt gatgaagata aaacaacaga tgaagaagaa aaggcacatt cgattacggc
     3001 aatttggaat tttgaaaagc aaaattatta tttaaggcat tagtgataac tgatgtcttt
     3061 ttttattact tttttgtaaa aaagtgctgt cttatttttg tgacaaattc tgtatgtagt
     3121 gtcacaaaac tgtgacaaac gcaatatatt gtgtcacaaa agtgtgacat ttcgtctttt
     3181 tatgccccca tgcaaaaaga tcgacgaagt cttgaaatat ctggctttgc cagatacctc
     3241 atctatagat ggggtcatat tttccttatg ctcttacgga gttcttagag aaaaattgaa
     3301 atttctcgat ttttgataaa aacgccctgc ag
//
