LOCUS       NZ_CP150010             4063 bp    DNA     circular CON 15-APR-2024
DEFINITION  Klebsiella pneumoniae strain 2024CK-00033 plasmid unnamed6, complete
            sequence.
ACCESSION   NZ_CP150010
VERSION     NZ_CP150010.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN39334914
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Klebsiella/Raoultella group; Klebsiella.
REFERENCE   1  (bases 1 to 4063)
  AUTHORS   Hergert,J., Casey,R., Wagner,J., Young,E.L. and Oakeson,K.F.
  TITLE     Pathogen: clinical or host-associated sample
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4063)
  AUTHORS   Hergert,J., Casey,R., Wagner,J., Young,E.L. and Oakeson,K.F.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-MAR-2024) Utah Public Health Laboratory, Utah Public
            Health Laboratory Infectious Disease submission group, 4431 S 2700
            W, Salt Lake City, UT 84129, USA
REFERENCE   3  (bases 1 to 4063)
  CONSRTM   Clinical and Environmental Microbiology Branch: Whole genome
            sequencing antimicrobial resistance pathogens in the healthcare
            setting
  TITLE     Direct Submission
  JOURNAL   Submitted (10-JAN-2024) Division of Healthcare Quality Promotion, US
            Centers for Disease Control and Prevention, 1600 Clifton Rd,
            Atlanta, GA, USA
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Method              :: Unicycler v. 0.5.0
            Genome Representation        :: Full
            Expected Final Version       :: Yes
            Genome Coverage              :: 150.0x
            Sequencing Technology :: Illumina MiSeq; Oxford Nanopore GridION
            ##Genome-Assembly-Data-END##
            ##Genome-Annotation-Data-START##
            Annotation Provider          :: NCBI RefSeq
            Annotation Name              :: GCF_038098245.1-RS_2024_04_15
            Annotation Date              :: 04/15/2024 12:45:55
            Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline
            (PGAP)
            Annotation Method :: Best-placed reference protein set; GeneMarkS-2+
            Annotation Software revision :: 6.7
            Features Annotated           :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                :: 3
            CDSs (total)                 :: 3
            Genes (coding)               :: 3
            CDSs (with protein)          :: 3
            Genes (RNA)                  :: 0
            tRNAs                        :: 0
            ncRNAs                       :: 0
            Pseudo Genes (total)         :: 0
            CDSs (without protein)       :: 0
            ##Genome-Annotation-Data-END##
            REFSEQ INFORMATION: The reference sequence is identical to
            CP150010.1.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..4063
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="2024CK-00033"
                     /isolation_source="urine"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /plasmid="unnamed6"
                     /geo_loc_name="USA"
                     /collection_date="2023-12-06"
     gene            complement(join(2022..4063,1..106))
                     /gene="mobQ"
                     /locus_tag="WLR76_RS00005"
                     /old_locus_tag="WLR76_28865"
     CDS             complement(join(2022..4063,1..106))
                     /gene="mobQ"
                     /locus_tag="WLR76_RS00005"
                     /old_locus_tag="WLR76_28865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016240513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MobQ family relaxase"
                     /protein_id="WP_001029354.1"
                     /translation="MAIYHLSMKIISRSSGYSAVASAAYRSGSLMLDERTGLTHDYTRK
                     SGVAEAVILTPATAPAWCTNRAELWNAVEKAERRKNSQLAREIELAIPHELPQDAARET
                     VLAFVRENFVSQGMIADVAFHHMDKTNPHAHIMLTTRAIGPAGFSGKVRDWNDRTHAET
                     WRASWADHANRALANAGYQEEIDHRSYERQGLEKTPGIHLGKSACAMETRGIETERGEQ
                     NRLINRLNLEIQISRTELRNGGLTEPARRVADLLNIGLPDNATSYTLRDIIEALPKDSN
                     SAWKLTSNAMSMMADMQATRRRWEELNTERKEAMSHAASLKKSSPFSSGFSRIPLMQWA
                     APEYRSEQGKIQSLSQQMEKLRQHYRKVEKQDIPASQMAFEKQWQQWGESGLAALRAQL
                     LKREEELRRKEQEDTERSRAEQLRKNDNAVMDSGVLRAVVTGYGEAPMPGNGEMTCYLL
                     LHNRNGEYTLWGNELEKYRTRIFESVDLMRDRSGYICDRSEIGQRPPLQRVYSSATFEQ
                     LLTQVCQTWPQHTRNLRQPKTWPESFCLGEDRQPAMPSPAARKVDFMQGRLPPTLMPVM
                     SSVDRETRQLQLLLVMGVDDSLGGVIRLNGTLYPAFAVPSADNRHLVISALTDKGLRYA
                     GYGVAVNHDADSHISPAPELMQFHLKTREAPLFAAVNTPEKQPDHLFRSLGFNRTWEEW
                     QREEDARTHTTERRHDRGWSQ"
                     /name="mobQ"
     gene            285..539
                     /gene="mobC"
                     /locus_tag="WLR76_RS00010"
                     /old_locus_tag="WLR76_28870"
     CDS             285..539
                     /gene="mobC"
                     /locus_tag="WLR76_RS00010"
                     /old_locus_tag="WLR76_28870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000091747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="relaxase accessory protein MobC"
                     /protein_id="WP_000091746.1"
                     /translation="MSRTLEQKIADAEARLQRLKAKSRSLDTAQKVVVGAALLAKVRKP
                     EEVQLRAWLLQFLKAEVTRQADVTRILPLINELEALPEQ"
                     /name="mobC"
     gene            1073..1774
                     /locus_tag="WLR76_RS00015"
                     /old_locus_tag="WLR76_28875"
     CDS             1073..1774
                     /locus_tag="WLR76_RS00015"
                     /old_locus_tag="WLR76_28875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001281399.1"
                     /GO_function="GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA]"
                     /GO_process="GO:0006270 - DNA replication initiation
                     [Evidence IEA]"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication initiation protein"
                     /protein_id="WP_001281395.1"
                     /translation="MSDLIAYKSNALIEASYKLTLQEQRFLLVCISRLKSGEDSPSPDE
                     QKTMTITAAEFHDAFPDMGRQHAEARLKEAIDRLWDRSVIIKNEEKREEFRWVQYRAQY
                     FKGEAKVDITFSDAIMPYLTQLKGQFTRVVVKNVSSLSSTYSIRIYELLQQFRSTGDRT
                     IAIDDFRTMLAVEDKYQQFKDLNKMIIKPAIAELNEKSDLVVTVETIKKGRTVVALHFR
                     FKEDKQIKMTI"
                     /name="replication initiation protein"
     Typing          complement(2..107)
                     /name="MOBQ"
                     /typing="oriT"
                     /tool="MOB-suite"
                     /identity="100.0"
                     /coverage="100.0"
                     /evalue="3.66e-48"
     Typing          108..284
                     /name="MOBQ"
                     /typing="oriT"
                     /tool="MOB-suite"
                     /identity="100.0"
                     /coverage="100.0"
                     /evalue="5.61e-88"
     Typing          complement(3812..4063)
                     /name="MOBQ"
                     /typing="oriT"
                     /tool="MOB-suite"
                     /identity="100.0"
                     /coverage="100.0"
                     /evalue="2.53e-129"
     Typing          1074..1774
                     /name="rep_cluster_1778"
                     /typing="replicon"
                     /tool="MOB-suite"
                     /identity="100.0"
                     /coverage="100.0"
                     /evalue="0.0"
     Typing          complement(2026..4061)
                     /name="MOBQ"
                     /typing="relaxase"
                     /tool="MOB-suite"
                     /identity="96.047"
                     /coverage="99.0"
                     /evalue="0.0"
ORIGIN
        1 tacgctcatc aagcatcagt gaaccggaac gataggcagc ggaagctacg gcgctgtagc
       61 cgctgcttct ggagataatt ttcatgctga gatgataaat cgccatttct gccgtaatgc
      121 ctttttgtag ttttctttca gccccgcagg gcgcacacaa tcgaaacgga gtggagattg
      181 tataagtgcg cacttcgtga tttgccgtgc attatgccag ctcagttttt aaactaccag
      241 tgacgcgcta aaatgcgatt tttcatcgcg cacggagtta catcatgagc agaacgctcg
      301 aacagaagat tgctgatgct gaggcgagat tacagcgcct gaaggcgaag agccggagcc
      361 tggacacagc gcagaaggtt gttgtgggtg ctgcattgct ggcaaaggtc agaaagccgg
      421 aggaggtgca gttgcgtgcc tggttactcc agttcctgaa ggcagaggtg acacgacagg
      481 ctgatgtgac gcgcatactg ccgctgatta acgagctgga ggcgctgcca gaacagtgat
      541 tgtatcgtcc gctcgccgca gccccagcga ccgagcgtta gcgagcgagt gggcgaggaa
      601 gcggaagtga atcagtcgcc aggttgagca catacgcacg gtttttcggc aggtgatatg
      661 cgctgaaccc gcatgaatac tgggtttcca cagggttgga gggggtgtat tcgaaacttg
      721 caattctgct ttattgcaac gcattgtttt tattggtttt ttgttttcag caccccaagt
      781 tatccacagg ctcgccgtta agtttttaag atcttatttt tagatctttt tttttaaaac
      841 ctttttaggt cttgtaacac catgatttta aagatgttct ggcaagataa gtggagcttt
      901 tgggggtgaa aggtggagct tttgggggtg aaaggtggag cttttggggg tgaaaggtgg
      961 agcttttggg ggtgtaatcc acagaaaaag ggggttgcaa aaaaaaaact tccacccata
     1021 tgataagtgg cgtacagtaa aaaaacgcca ccaatagcaa cgagcaagcg aaatgtcaga
     1081 tctgatagct tacaaatcaa acgcccttat cgaggcaagc tacaagctca ctttgcagga
     1141 acagcgcttc ctgctggtct gtatcagccg cctaaaatcc ggagaagatt ccccttcgcc
     1201 ggatgaacaa aaaaccatga ccatcacggc tgcagagttt catgatgcct ttcctgacat
     1261 gggacggcag cacgctgaag ctaggctcaa ggaagcgata gatcgcctct gggacaggtc
     1321 agtaatcatc aagaacgagg aaaaacgaga agagttccgc tgggtgcagt accgggcgca
     1381 gtatttcaaa ggtgaggcga aagtagatat caccttctcc gatgccatca tgccgtatct
     1441 gacacagctc aaggggcagt ttacgcgggt agtcgtgaag aacgtctcca gcctttccag
     1501 cacctacagc atccgcattt acgagctgct ccagcagttc cgcagcaccg gtgacagaac
     1561 gatagctatc gatgatttcc gaaccatgct tgccgttgaa gataaatatc aacaattcaa
     1621 agacttgaat aagatgataa tcaagccagc catcgccgaa ctgaacgaaa aaagcgatct
     1681 ggttgtaact gttgagacga tcaaaaaggg gcgcacggtt gtagccctgc attttcgctt
     1741 caaggaagac aaacagatca agatgacgat ctaaaatcga ttttaaggca cctaaaacgc
     1801 tccctgctgc gttttttttg tgttagtagt gcgaaggtac tattgaagtg aaaaattgcg
     1861 tcaaaaacgc tctgatgcag cgaaaaaaga ccccccaatt tttgggggcg gaaaaacaaa
     1921 actatgcttg cgttatgtga gtgtgcttct tgcattcatc cctgtcgatg aacatcgacg
     1981 aacataacac gatgttaaac aaaacaaaat attgttcaca ttcactgtga ccaaccgcga
     2041 tcatgtctcc tctcggtggt gtgtgttcgt gcatcttcct cgcgctgcca ttcctcccag
     2101 gtacgattaa aacccagcga gcggaacaga tgatccggct gtttttctgg tgtgttgacg
     2161 gcagcaaaaa gcggtgcctc acgggttttc agatgaaact gcatcagttc tggtgcaggt
     2221 gatatgtggc tgtctgcatc gtgatttacg gcaacaccat accctgcata ccgtaacccc
     2281 ttatcggtca gcgcactgat gaccagatgc ctgttatcgg ctgagggaac ggcaaacgcg
     2341 ggatacagcg taccattaag ccggataaca ccgcccagag agtcatccac gcccatgacc
     2401 agcaaaagct gaagctggcg ggtttcccgg tcgacagaac tcatgaccgg catcagcgtc
     2461 ggtggcagac gtccctgcat aaaatccacc ttccttgccg ctggtgatgg catggctggc
     2521 tggcggtctt ctccaagaca gaaagactcc ggccatgtct tcggctggcg gagattgcgg
     2581 gtatgttgcg gccatgtctg gcaaacctgc gtcagcagtt gctcaaaggt tgcagaggaa
     2641 taaacacgtt gcagtggcgg acgttggccg atttcgcttc ggtcacagat ataaccactc
     2701 ctgtcacgca ttaaatcaac actctcaaag attctggtgc ggtatttctc cagctcgttc
     2761 ccccagagcg tatattctcc gttccggttg tgaagcagaa ggtaacaggt catttccccg
     2821 ttaccaggca tgggagcctc gccatacccc gtaacgactg ctctcagcac ccctgaatcc
     2881 ataacggcat tgtcattttt cctgagctgc tccgcgcgac tacgttcagt atcttcctgt
     2941 tccttccggc gcaattcctc ttcacgttta agcaactggg ctctgagagc tgcaaggccg
     3001 gattcccccc actgctgcca ctgtttttca aatgccatct gactcgcggg aatgtcctgt
     3061 ttctccacct tccggtaatg ctgtcgtaat ttttccattt gctggctcag agactggatt
     3121 tttccctgct cactacggta ttccggtgcc gcccattgca tcaggggaat acgggaaaaa
     3181 ccggacgaaa acggcgatga ttttttcagg ctggcagcat ggctcatcgc ttcctttcgt
     3241 tcggtgttca gctcttccca gcgtctgcgc gtcgcctgca tatctgccat catcgacatg
     3301 gcattactgg tgagtttcca tgccgagtta ctgtccttcg gcaacgcttc gataatgtca
     3361 cgtagtgtgt acgaagttgc gttgtcagga agcccgatat tcagaaggtc agccacacgg
     3421 cgggcaggct ctgtcagccc tccgttcctg agttcggtgc gggaaatctg tatttccagg
     3481 ttaagcctgt taatcagacg attctgttcg ccgcgttctg tttcgatacc gcgtgtttcc
     3541 atcgcacagg cagactttcc gaggtgaata ccaggcgttt tctcaagccc ctgtcgctcg
     3601 tatgaacgat ggtctatctc ttcctgataa ccggcgttcg ccagtgccct gtttgcatgg
     3661 tcagcccatg atgcccgcca cgtctcggca tgtgtccggt cgttccagtc cctgaccttt
     3721 ccgctgaacc cagcaggtcc gatagccctc gtggtcagca tgatgtgcgc atggggattt
     3781 gttttatcca tgtgatggaa cgccacatca gcaatcatgc cctgactgac aaagttttct
     3841 ctgacaaagg cgagaacggt ttcccgtgcg gcatcctgcg gcagttcgtg ggggatggcg
     3901 agttcaattt cccgcgcaag ttgtgagttc ttccggcgtt cggccttctc aacggcattc
     3961 cagagttcgg cacggttcgt acaccaggca ggggcggtgg cgggggtcag aatcacagcc
     4021 tcagccacac cgcttttgcg ggtgtagtcg tgagtcagtc cgg
//
