LOCUS       NZ_CP149273             2137 bp    DNA     circular CON 23-APR-2024
DEFINITION  Salmonella enterica subsp. enterica serovar 4,[5],12:i:- strain
            Z1322HSL0031 plasmid pZ1322HSL0031-4, complete sequence.
ACCESSION   NZ_CP149273
VERSION     NZ_CP149273.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN40440205
KEYWORDS    RefSeq.
SOURCE      Salmonella enterica subsp. enterica serovar 4,[5],12:i:-
  ORGANISM  Salmonella enterica subsp. enterica serovar 4,[5],12:i:-
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 2137)
  AUTHORS   Chae,J.-C., Oh,J.Y., Jeong,J.H. and Kwak,S.M.
  TITLE     Complete genome sequence of Salmonella enterica subsp. enterica
            serovar 4,[5],12:i:- isolated from humans and pigs
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2137)
  AUTHORS   Chae,J.-C., Oh,J.Y., Jeong,J.H. and Kwak,S.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (13-MAR-2024) Division of biotechnology, Jeonbuk National
            University, kobongro, Iksan 54596, South Korea
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Method              :: Unicycler v. v0.4.9
            Genome Representation        :: Full
            Expected Final Version       :: Yes
            Genome Coverage              :: 113X
            Sequencing Technology :: Illumina NovaSeq; Oxford Nanopore MinION
            ##Genome-Assembly-Data-END##
            ##Genome-Annotation-Data-START##
            Annotation Provider          :: NCBI RefSeq
            Annotation Name              :: GCF_038397345.1-RS_2024_04_23
            Annotation Date              :: 04/23/2024 10:49:30
            Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline
            (PGAP)
            Annotation Method :: Best-placed reference protein set; GeneMarkS-2+
            Annotation Software revision :: 6.7
            Features Annotated           :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                :: 1
            CDSs (total)                 :: 1
            Genes (coding)               :: 1
            CDSs (with protein)          :: 1
            Genes (RNA)                  :: 0
            tRNAs                        :: 0
            ncRNAs                       :: 0
            Pseudo Genes (total)         :: 0
            CDSs (without protein)       :: 0
            ##Genome-Annotation-Data-END##
            REFSEQ INFORMATION: The reference sequence is identical to
            CP149273.1.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2137
                     /organism="Salmonella enterica subsp. enterica serovar
                     4,[5],12:i:-"
                     /mol_type="genomic DNA"
                     /strain="Z1322HSL0031"
                     /serovar="4,[5],12:i:-"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:440524"
                     /plasmid="pZ1322HSL0031-4"
                     /geo_loc_name="South Korea"
                     /collection_date="2022-07-27"
     gene            complement(join(2107..2137,1..965))
                     /locus_tag="WIY06_RS00005"
                     /old_locus_tag="WIY06_25555"
     CDS             complement(join(2107..2137,1..965))
                     /locus_tag="WIY06_RS00005"
                     /old_locus_tag="WIY06_25555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020240588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein rep"
                     /protein_id="WP_038989441.1"
                     /translation="MQNPKLKNLTDYSPDDKPWDVHKSQSDDVGGIYLRAAEFEAYAAR
                     MRDCGGLLRFGWSTLKDTGETRLRLREAHFCRVRHCPVCQWRRSLMWQARFYQSLPKIV
                     ADYPDARWMFLTLTVRNCAIEDLGDTLTAMNAAFQRMKVRKEFKSVQGWIRTTEVTRGR
                     DGSAHPHFHTLMMVPPGMLNGHDYVKHYRWVELWRDCLRVDYDPNVDVRAVKPRKPKDG
                     QTLACATAELVRGAVAETLKYSTKPADMVADPDWFLELTRQTHKRRFVATGGALKDVLK
                     LEQETDQDMVIGDDISDGEDDGSRLAFGWDSTPRKYVRLPERDKFKSDPD"
                     /name="protein rep"
     Typing          60..250
                     /name="ColpVC"
                     /typing="replicon"
                     /tool="MOB-suite"
                     /identity="84.375"
                     /coverage="98.0"
                     /evalue="1.4200000000000001e-44"
ORIGIN
        1 tcaggcaaac ggacgtattt tcttggcgtc gaatcccagc caaaggcgag gcgtgaacca
       61 tcgtcttcac catcggaaat atcatccccg atcaccatgt cctgatccgt ttcctgctcc
      121 agtttcagaa cgtctttcag agcgccaccg gtcgcaacaa aacggcgttt atgcgtctgc
      181 cgggtcagct ctaagaacca gtccgggtcg gcaaccatat cagccggctt tgtcgaatat
      241 ttcagggttt cagcaacggc accgcgcacc agttcagcag tggcacatgc cagagtctgg
      301 ccatctttag gcttgcgggg tttcactgcc cgaacatcaa cattaggatc gtaatcaacg
      361 cgcaggcagt cacgccagag ttcaacccag cggtagtgct taacgtagtc atgaccgttc
      421 agcatcccag gaggaaccat catcagggtg tgaaagtggg ggtgtgcaga gccatcacga
      481 ccgcgggtaa cttctgtggt gcgaatccat ccctgtacgg atttaaattc cttgcgaacc
      541 ttcatgcgct ggaatgcggc attcatggca gtaagcgtgt ccccgagatc ctcgatcgca
      601 cagttgcgaa cggtgagcgt gaggaacatc cagcgggcat cagggtaatc agcgacgatt
      661 ttcggcagag actgataaaa acgggcttgc cacatcaggg aacgcctcca ctggcagaca
      721 gggcagtgac gaacgcggca gaaatgcgcc tcacgaagcc gtaaacgcgt ttctccggtg
      781 tctttaaggg tagaccagcc aaaacgcagc aagccgccac aatcgcgcat acgagccgca
      841 tacgcctcaa attcagctgc acgcagatag ataccgccaa catcatcaga ttgcgacttg
      901 tgaacgtccc acggcttatc gtcgggactg tagtcagtaa ggttctttag cttaggattc
      961 tgcatagcac ctgctccaat atgggcaggc gctggaaggg tgtgttatca tttccgtatc
     1021 acctgttgcg agtcgatttc aaaccgtatt tagccaggtg atcgcgcccc tgaagtgttg
     1081 gtagcacttg caggggtttc tcatatcatc gtgtcagtaa gtaaggtctt gggaaccacc
     1141 ccaagtaatc aaaaattagt tcgcggacac gatcacctgt cagaaatcat actcacaaaa
     1201 ccattttcga gcaaattggc tctcaggcct tgcggcacaa gggctggaag cgaatttgaa
     1261 tcctagagtt atcccttaag tataaataca aggatttcgc ccctttcagg gccgaaaaac
     1321 caacccccaa aagcagcatt caggcactca aacactcaag cattcgtaag ctcaaaaatt
     1381 aagcaaacca cgttaaatcg ccccccctga gaaatgtcag attgagacaa acgtgcagta
     1441 ttacattcac tgcacgcggc tgtttccgtt gcaaatcgca acaagagtcc actattaaac
     1501 agagtggacc ccgattccga acggcgtgtg cctcctcgca gagctgcggg ggcaatcccc
     1561 gttcctcatc gcggccgcac gactttaccc cgcatactcc tgatggcgga tttaaacgaa
     1621 taaggcatac cgagcaaaac gaaaataccc ccacggcatc acctgtaggg cagggcttac
     1681 gcacctaccc cacaggcaac gccttgaagg gggtaaaaag cggctttaca gggcgatggc
     1741 tcaccatgtg aaccatcacc catcacaagg gtatgagggg tgcagtcgta caaccactaa
     1801 atcggaaccc taaagggatc ccccgattta gaagttgacg attcgacggc ggcgaacgct
     1861 gtcagattta atattccatt gagcagagtg cgaataaggc aggcgtaaag tggtcccact
     1921 ttacatatcc tgcccgaatt ctgccgttga ttattcgtgt atgcgtgtat gtatgcagag
     1981 tggaaatctc agggaaaccc gaaggaatgc caaaggaaat ctgtgtaccg gacaagatgt
     2041 gtttttggag taccgccaca cgcagcggca tccaaaaaca acctggtcag ggcaggcccc
     2101 gacaccctaa tcaggatctg atttaaactt atcgcgt
//
