LOCUS       NZ_CP149251             2101 bp    DNA     circular CON 23-APR-2024
DEFINITION  Salmonella enterica subsp. enterica serovar 4,[5],12:i:- strain
            Z1322HSL0048 plasmid pZ1322HSL0048-6, complete sequence.
ACCESSION   NZ_CP149251
VERSION     NZ_CP149251.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN40440211
KEYWORDS    RefSeq.
SOURCE      Salmonella enterica subsp. enterica serovar 4,[5],12:i:-
  ORGANISM  Salmonella enterica subsp. enterica serovar 4,[5],12:i:-
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 2101)
  AUTHORS   Chae,J.-C., Oh,J.Y., Jeong,J.H. and Kwak,S.M.
  TITLE     Complete genome sequence of Salmonella enterica subsp. enterica
            serovar 4,[5],12:i:- isolated from humans and pigs
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2101)
  AUTHORS   Chae,J.-C., Oh,J.Y., Jeong,J.H. and Kwak,S.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (13-MAR-2024) Division of biotechnology, Jeonbuk National
            University, kobongro, Iksan 54596, South Korea
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Method              :: Unicycler v. v0.4.9
            Genome Representation        :: Full
            Expected Final Version       :: Yes
            Genome Coverage              :: 111X
            Sequencing Technology :: Illumina NovaSeq; Oxford Nanopore MinION
            ##Genome-Assembly-Data-END##
            ##Genome-Annotation-Data-START##
            Annotation Provider          :: NCBI RefSeq
            Annotation Name              :: GCF_038397215.1-RS_2024_04_23
            Annotation Date              :: 04/23/2024 10:50:48
            Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline
            (PGAP)
            Annotation Method :: Best-placed reference protein set; GeneMarkS-2+
            Annotation Software revision :: 6.7
            Features Annotated           :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                :: 2
            CDSs (total)                 :: 2
            Genes (coding)               :: 2
            CDSs (with protein)          :: 2
            Genes (RNA)                  :: 0
            tRNAs                        :: 0
            ncRNAs                       :: 0
            Pseudo Genes (total)         :: 0
            CDSs (without protein)       :: 0
            ##Genome-Annotation-Data-END##
            REFSEQ INFORMATION: The reference sequence is identical to
            CP149251.1.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2101
                     /organism="Salmonella enterica subsp. enterica serovar
                     4,[5],12:i:-"
                     /mol_type="genomic DNA"
                     /strain="Z1322HSL0048"
                     /serovar="4,[5],12:i:-"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:440524"
                     /plasmid="pZ1322HSL0048-6"
                     /geo_loc_name="South Korea"
                     /collection_date="2022-09-05"
     gene            184..1149
                     /locus_tag="WIY66_RS00005"
                     /old_locus_tag="WIY66_25315"
     CDS             184..1149
                     /locus_tag="WIY66_RS00005"
                     /old_locus_tag="WIY66_25315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012421200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein rep"
                     /protein_id="WP_001287824.1"
                     /translation="MSEDKFLSDYSPRDAVWDTQRTLTDSVGGIYQTAAEFERYALRMA
                     SCSGLLRFGWSTIMETGETRLRLRSAQFCRVRHCPVCQWRRTLMWQARFYQALPKIVVD
                     YPSSRWLFLTLTVRNCEIGELGTVLTAMNAAFKRMEKRKELSPVQGWIRATEVTRGKDG
                     SAHPHFHCLLMVQPSWFKGKNYVKHERWVELWRDCLRVNYEPNIDIRAVKTKTGEVVAN
                     VAEQLQSAVAETLKYSVKPEDMANDPEWFLELTRQLHKRRFISTGGALKNVLQLDRETN
                     EDLVIADDVGDGTDDGKRTAFVWDSGKRRYKRAPEKDKSD"
                     /name="protein rep"
     gene            1153..1419
                     /locus_tag="WIY66_RS00010"
                     /old_locus_tag="WIY66_25320"
     CDS             1153..1419
                     /locus_tag="WIY66_RS00010"
                     /old_locus_tag="WIY66_25320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001024536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WP_001024536.1"
                     /translation="MNINIEYLNGNKTIGLFFLRSEAVIPDRFKNLILLIDGLSFGTFG
                     FHPHEGFEDELILYIQKTNERVKTLFVKIDLNGIKFGFLRTHS"
                     /name="hypothetical protein"
     Typing          578..809
                     /name="Col(BS512)"
                     /typing="replicon"
                     /tool="MOB-suite"
                     /identity="100.0"
                     /coverage="100.0"
                     /evalue="2.05e-118"
ORIGIN
        1 aaagaaaatg gagcagaatt gaggcgtttt taatcggcgt tggggagtgc gtcaacactc
       61 cccaacattt cgaatgtgtc acctcagcgg caaactctgg tgacatgtac tggctcgcaa
      121 tgcacaggta cgtgatgaat ataccacatc aaatcacagc ctgcccagat cggagcaggc
      181 ttaatgtcag aagataaatt cctttcggac tacagccccc gtgatgcagt ttgggatacc
      241 cagcgcacgc ttaccgattc tgtcgggggt atctaccaga ctgctgctga attcgagcgc
      301 tatgcactcc gtatggcctc ctgtagcggt ttgttacgtt ttggttggtc taccatcatg
      361 gaaaccggag aaacgcgcct acggcttcgt agtgcgcaat tttgccgtgt ccgtcattgc
      421 cctgtctgcc agtggagaag aaccctcatg tggcaagccc gtttttatca ggctctaccg
      481 aaaatcgttg tggattaccc gtcttcccga tggttgtttc tgacgttaac tgtcaggaac
      541 tgcgagatag gtgaacttgg aacagtcctt acagcaatga atgcggcgtt taagcgaatg
      601 gaaaagcgaa aggagctatc acctgttcag gggtggatca gggctacgga ggtgacgcga
      661 ggtaaggatg gcagcgcaca tccgcatttt cactgtctgc tgatggtgca accttcttgg
      721 tttaaaggga agaactacgt taagcacgaa cgttgggtag aactctggcg cgattgcttg
      781 cgggtgaact atgagccgaa tatcgatatt cgggcagtaa aaactaagac aggtgaggtt
      841 gtggccaacg ttgccgagca actgcaaagc gcggttgctg aaacgctgaa atactccgtt
      901 aaaccggaag atatggcaaa cgatcctgag tggtttcttg agctgacgcg gcagcttcac
      961 aagcgccgtt ttatctcgac cggtggggcg ctaaaaaacg tcctccagtt ggatcgagaa
     1021 accaatgagg atcttgtcat tgccgacgat gtaggggatg gcactgatga cgggaagcgg
     1081 acggcgtttg tctgggattc aggtaaacgg cgttacaaac gcgcccctga gaaggataaa
     1141 tcggattaac gtatgaatat taatattgaa tacctgaatg gaaataagac tattggttta
     1201 ttttttttaa gaagtgaagc ggtgattcct gacaggttta aaaaccttat tttgcttatt
     1261 gatggattaa gttttggcac atttggtttt catccgcacg aaggttttga ggatgaatta
     1321 attttatata ttcagaaaac aaacgagagg gtaaaaactc tttttgtgaa aatagattta
     1381 aacggtatca agtttggatt tttaagaacg cattcttagt tctggaaaag agccagcggc
     1441 aggctgaggt gataggtacg agattgcatg caatctctag tgctctgtct atcctgcatt
     1501 atcctcagca ttatcctcag cattatcctc agccttgcca actcgacacc aatgcaggat
     1561 agacaatccg atgtcaaatg ttaacactct gcgagtggta cattttcccc ggattatcgt
     1621 cctgagcctg ccgctggctc tctttctacc gcctcgcttt gctcgttgct caacgcctca
     1681 cagacacgga ttaaaatccg catccgttca ccgtttttta aagtccgtta aaagcatgat
     1741 gccatctccg agagttaatc tcgtcaaatg ctaaatcgtg ggggtcccct ttggggttcc
     1801 gatttagtga ttgacgacac caccgattaa aaaacttatg cggggtggat ggtttcacga
     1861 agtgaggcca tccacctgta agacagggtt ttgtttttat tccctgtttt ggtgatcggg
     1921 tgtgtggaaa aggttggggt aagccgttcg ggggtgcttg ttttgggggg ttaaaattgt
     1981 ggttattttt tgcgcaattc tcgcgcgtga tccttgtatt tatacttaag ggataaatgg
     2041 cggatatgaa atagtggttt agcccagtaa tgacgaggct ttgagtgggt tttgacaggt
     2101 c
//
