LOCUS       NZ_CP149232             1888 bp    DNA     circular CON 23-APR-2024
DEFINITION  Salmonella enterica subsp. enterica serovar 4,[5],12:i:- strain
            Z1323HSL0013 plasmid pZ1323HSL0013-5, complete sequence.
ACCESSION   NZ_CP149232
VERSION     NZ_CP149232.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN40440217
KEYWORDS    RefSeq.
SOURCE      Salmonella enterica subsp. enterica serovar 4,[5],12:i:-
  ORGANISM  Salmonella enterica subsp. enterica serovar 4,[5],12:i:-
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 1888)
  AUTHORS   Chae,J.-C., Oh,J.Y., Jeong,J.H. and Kwak,S.M.
  TITLE     Complete genome sequence of Salmonella enterica subsp. enterica
            serovar 4,[5],12:i:- isolated from humans and pigs
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1888)
  AUTHORS   Chae,J.-C., Oh,J.Y., Jeong,J.H. and Kwak,S.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (13-MAR-2024) Division of biotechnology, Jeonbuk National
            University, kobongro, Iksan 54596, South Korea
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Method              :: Unicycler v. v0.4.9
            Genome Representation        :: Full
            Expected Final Version       :: Yes
            Genome Coverage              :: 96X
            Sequencing Technology :: Illumina NovaSeq; Oxford Nanopore MinION
            ##Genome-Assembly-Data-END##
            ##Genome-Annotation-Data-START##
            Annotation Provider          :: NCBI RefSeq
            Annotation Name              :: GCF_038397125.1-RS_2024_04_23
            Annotation Date              :: 04/23/2024 10:52:13
            Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline
            (PGAP)
            Annotation Method :: Best-placed reference protein set; GeneMarkS-2+
            Annotation Software revision :: 6.7
            Features Annotated           :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                :: 2
            CDSs (total)                 :: 2
            Genes (coding)               :: 2
            CDSs (with protein)          :: 2
            Genes (RNA)                  :: 0
            tRNAs                        :: 0
            ncRNAs                       :: 0
            Pseudo Genes (total)         :: 0
            CDSs (without protein)       :: 0
            ##Genome-Annotation-Data-END##
            REFSEQ INFORMATION: The reference sequence is identical to
            CP149232.1.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1888
                     /organism="Salmonella enterica subsp. enterica serovar
                     4,[5],12:i:-"
                     /mol_type="genomic DNA"
                     /strain="Z1323HSL0013"
                     /serovar="4,[5],12:i:-"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:440524"
                     /plasmid="pZ1323HSL0013-5"
                     /geo_loc_name="South Korea"
                     /collection_date="2023-04-19"
     gene            complement(506..619)
                     /locus_tag="WIY49_RS00005"
                     /old_locus_tag="WIY49_26610"
     CDS             complement(506..619)
                     /locus_tag="WIY49_RS00005"
                     /old_locus_tag="WIY49_26610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005761324.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WP_001517211.1"
                     /translation="MHEPPVQSDCCACSGNYRLESNPERHAKAPLAAATGN"
                     /name="hypothetical protein"
     gene            1316..1552
                     /locus_tag="WIY49_RS00010"
                     /old_locus_tag="WIY49_26615"
     CDS             1316..1552
                     /locus_tag="WIY49_RS00010"
                     /old_locus_tag="WIY49_26615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001676031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WP_001676031.1"
                     /translation="MNRLTNLTPAEKKFLDDAIAAAERASGKKLNQPNRHIVLNRARAQ
                     IESQRYADRQRALREDERQQSEFAWSRPRAPRR"
                     /name="hypothetical protein"
     Typing          complement(511..994)
                     /name="rep_cluster_2335"
                     /typing="replicon"
                     /tool="MOB-suite"
                     /identity="95.277"
                     /coverage="80.0"
                     /evalue="0.0"
ORIGIN
        1 tacccgaaaa catgtaccga agctcacgtt gtcgttactt atcacaaagt aattttaccc
       61 ctggggtgaa tctacgtcaa ttgagccggt attcctttct atcaatatga aggaataaac
      121 gtatggccga actgcttacg gcgtttatta aagcaccact tataagccag gtgctgacca
      181 tcattctgtg tctgatcttt gtagtacaca gtcttttaaa ttgatgtacc acccataaaa
      241 aaagccactt atgtggcttt ttttatgaat cgagagatag gtatctgttg aatatcacag
      301 atgatcttct tgagatcctt ttcgttgcgt cgtaatctct tgctctggaa acgaaaaaaa
      361 ccgcccagca aggcggtttt tcgaaggttc tcagagcagc aactctttga accgcggtaa
      421 ctggcttaag aggagcgcag taaccaaatc tgtcctttca gtttagcctt aactggcaca
      481 taacttcaag actaactcct ctaaatcagt taccagtggc tgctgccagt ggcgcttttg
      541 catgtctttc cgggttggac tcaagtcgat agttaccgga acaggcgcag cagtcggact
      601 gaacgggggg ttcgtgcata cagtccagct tggagcgaac tgccttcccg gaactgagtg
      661 tcaggcgtgg aatgagagac cgcggccata acagcggaat gacaccggta aaccgaaagg
      721 caggaacagg agagcgcacg agggagccac cagggggaaa cgcctggtat ctttaagtcc
      781 tgtcgggttt cgccaccact gatttgagcg tcagatttcg tgatgcttgt caggggggcg
      841 gagcctatgg aaaaacggct ttgccgcggc cttatggttt ccctgttaag tttcttcctg
      901 gcatccacta ggaaatttcc gccccattag taagcctgca ccgctcgccg cagccgaacg
      961 accgagcgga gcgagtcagt gagcgaggaa gcggcatttc tccggcagtg catcttctgc
     1021 tgacgcatac gaatctcatt tttcacctgc tttatgtggc agctatgcct gatgtttctg
     1081 cgatgttaca ttttaagcca gtatacactc cgctagcgct atgtgactgg ttcagggctg
     1141 cgccccgaaa cccgctaaaa ccactgacgc gcctgcggct tgcccaacgt ctcacgtcac
     1201 cggattaaaa tccgctcccg ttcaccgttt ctggctgtct ttcagcaccg ccagcgcttc
     1261 atcggttctg ctgtgtctgg cagactgtgc ggagttattc tgacgggaga atgctatgaa
     1321 cagactgaca aacctgacac ctgcagagaa aaaatttctt gatgatgcta ttgccgcagc
     1381 tgagagagcg tcaggcaaaa agctaaatca gccgaaccgg catatcgtcc tgaacagagc
     1441 gcgtgcgcag attgagtcgc agcgttacgc cgaccgccag cgtgcattac gtgaggatga
     1501 gcggcagcag tccgagtttg cctggtcacg tccgcgcgcg ccgcgccgct gattgcgcct
     1561 tttggcggtt tagtggtgct gacactccga aatcgtctgc cattcacccg cgtgcatagc
     1621 catgcagtcg cgcagaaatc atcaggtgcg tttttcaggg ttatggccag ggaaaggtgc
     1681 tggaaatggc taactcgtta cagagtggcg ctgagggcct ctcaggcggt gcgggcaacg
     1741 gatgttatgg taaatagagc gttttggtga ctcgcccgcc acatctttag ctgtgatata
     1801 attttacaga aggatgaaag ggcaaaaaaa aagaatccgt aaggattctt tttctcgcct
     1861 cagtcagcga ctgcgaatcg ctgactgc
//
