LOCUS       NZ_CP145433             1663 bp    DNA     circular CON 05-APR-2024
DEFINITION  Acinetobacter baumannii strain A20AB02 plasmid pA20AB02c, complete
            sequence.
ACCESSION   NZ_CP145433
VERSION     NZ_CP145433.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN39325909
            Assembly: GCF_036870965.1
KEYWORDS    RefSeq.
SOURCE      Acinetobacter baumannii
  ORGANISM  Acinetobacter baumannii
            Bacteria; Pseudomonadota; Gammaproteobacteria; Moraxellales;
            Moraxellaceae; Acinetobacter; Acinetobacter calcoaceticus/baumannii
            complex.
REFERENCE   1  (bases 1 to 1663)
  AUTHORS   Moon,D.
  TITLE     Genome sequence of Acinetobacter baumannii in Korea
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1663)
  AUTHORS   Moon,D.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-FEB-2024) Division of Antimicrobial Resistance
            Research, National Institute of Health, 187 Osongsaengmyeong2-ro,
            Cheongju-si, 28159, Korea, Cheongju-si, Chungcheongbuk-do 28159,
            South Korea
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Method                   :: flye v. v2.9.3; pilon v. v1.24
            Genome Representation             :: Full
            Expected Final Version            :: Yes
            Genome Coverage                   :: 601.092x
            Sequencing Technology             :: Illumina MiSeq; Minion
            ##Genome-Assembly-Data-END##
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_036870965.1-RS_2024_04_05
            Annotation Date                   :: 04/05/2024 16:42:59
            Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline
            (PGAP)
            Annotation Method :: Best-placed reference protein set; GeneMarkS-2+
            Annotation Software revision      :: 6.7
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,827
            CDSs (total)                      :: 3,732
            Genes (coding)                    :: 3,634
            CDSs (with protein)               :: 3,634
            Genes (RNA)                       :: 95
            rRNAs                             :: 6, 6, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 6, 6 (5S, 16S, 23S)
            tRNAs                             :: 73
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 98
            CDSs (without protein)            :: 98
            Pseudo Genes (ambiguous residues) :: 0 of 98
            Pseudo Genes (frameshifted)       :: 23 of 98
            Pseudo Genes (incomplete)         :: 66 of 98
            Pseudo Genes (internal stop)      :: 15 of 98
            Pseudo Genes (multiple problems)  :: 6 of 98
            ##Genome-Annotation-Data-END##
            REFSEQ INFORMATION: The reference sequence is identical to
            CP145433.1.
            Bacteria and source DNA available from National Institute of
            Health.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1663
                     /organism="Acinetobacter baumannii"
                     /mol_type="genomic DNA"
                     /strain="A20AB02"
                     /host="Homo sapiens"
                     /db_xref="taxon:470"
                     /plasmid="pA20AB02c"
                     /geo_loc_name="South Korea"
                     /collection_date="2020-01-23"
     gene            complement(129..539)
                     /locus_tag="VP418_RS18985"
                     /old_locus_tag="VP418_18985"
     CDS             complement(129..539)
                     /locus_tag="VP418_RS18985"
                     /old_locus_tag="VP418_18985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415090.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1398 domain-containing protein"
                     /protein_id="WP_012775990.1"
                     /translation="MAQVAIFKEIFDQVRKDLDCELFYSELKRHNVSHYIYYLATDNIH
                     IVLENDNTVLIKGLKKVVNVKFSRNTHLIETSYDRLKSREITFQQYRENLAKAGVFRWV
                     TNIHEHKRYYYTFDNSLLFTESIQNTTQIFPR"
                     /name="DUF1398 domain-containing protein"
     gene            825..1031
                     /gene="ybcW"
                     /locus_tag="VP418_RS18990"
                     /old_locus_tag="VP418_18990"
     CDS             825..1031
                     /gene="ybcW"
                     /locus_tag="VP418_RS18990"
                     /old_locus_tag="VP418_18990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein YbcW"
                     /protein_id="WP_001031427.1"
                     /translation="MNKEQSADDPSVDLIRVKNMLNSTISMSYPDVVIACIEHKVSLEA
                     FRAIEAALVKHDNNMKDYSLVVD"
                     /name="ybcW"
     gene            complement(1196..1390)
                     /locus_tag="VP418_RS18995"
                     /old_locus_tag="VP418_18995"
     CDS             complement(1196..1390)
                     /locus_tag="VP418_RS18995"
                     /old_locus_tag="VP418_18995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_001165309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YlcI/YnfO family protein"
                     /protein_id="WP_001421937.1"
                     /translation="MSTKNRTRRTTTRNIRFPNQMIEQINIALEQKGSGNFSAWVIEAC
                     RRRLTSEKRAYTSIKSDEE"
                     /name="YlcI/YnfO family protein"
ORIGIN
        1 ctgacgggga acttctctgc gggagtgtcc gggaataatt aaaacgatgc acacagggtt
       61 tagcgcgtac acgtattgca ttatgccaac gccccggtgc tgacacggaa gaaaccggac
      121 gttatgattt agcgtggaaa gatttgtgta gtgttctgaa tgctctcagt aaatagtaat
      181 gaattatcaa aggtatagta atatctttta tgttcatgga tatttgtaac ccatcggaaa
      241 actcctgctt tagcaagatt ttccctgtat tgctgaaatg tgatttctct tgatttcaac
      301 ctatcatagg acgtttctat aagatgcgtg tttcttgaga atttaacatt tacaaccttt
      361 ttaagtcctt ttattaacac ggtgttatcg ttttctaaca cgatgtgaat attatctgtg
      421 gctagatagt aaatataatg tgagacgttg tgacgtttta gttcagaata aaacaattca
      481 cagtctaaat cttttcgcac ttgatcgaat atttctttaa aaatggcaac ctgagccatt
      541 ggtaaaacct tccatgtgat acgagggcgc gtagtttgca ttatcgtttt tatcgtttca
      601 atctggtctg acctccttgt gttttgttga tgatttatgt caaatattag gaatgttttc
      661 acttaatagt attggttgcg taacaaagtg cggtcctgct ggcattctgg agggaaatac
      721 aaccgacaga tgtatgtaag gccaacgtgc tcaaatcttc atacagaaag atttgaagta
      781 atattttaac cgctagatga agagcaagcg catggagcga caaaatgaat aaagaacaat
      841 ctgctgatga tccctccgtg gatctgattc gtgtaaaaaa tatgcttaat agcaccattt
      901 ctatgagtta ccctgatgtt gtaattgcat gtatagaaca taaggtgtct ctggaagcat
      961 tcagagcaat tgaggcagcg ttggtgaagc acgataataa tatgaaggat tattccctgg
     1021 tggttgactg atcaccataa ctgctaatca ttcaaactat ttagtctgtg acagagccaa
     1081 cacgcagtct gtcactgtca ggaaagtggt aaaactgcaa ctcaattact gcaatgccct
     1141 cgtaattaag tgaatttaca atatcgtcct gttcggaggg aagaacgcgg gatgttcatt
     1201 cttcatcact tttaattgat gtatatgctc tcttttctga cgttagtctc cgacggcagg
     1261 cttcaatgac ccaggctgag aaattcccgg accctttttg ctcaagagcg atgttaattt
     1321 gttcaatcat ttggttagga aagcggatgt tgcgggttgt tgttctgcgg gttctgttct
     1381 tcgttgacat gaggttgccc cgtattcagt gtcgctgatt tgtattgtct gaagttgttt
     1441 ttacgttaag ttgatgcaga tcaattaata cgatacctgc gtcataattg attatttgac
     1501 gtggtttgat ggcctccacg cacgttgtga tatgtagatg ataatcatta tcactttacg
     1561 ggtcctttcc ggtgaaaaaa aaggtaccaa aaaaaacatc gtcgtgagta gtgaaccgta
     1621 agcaggtgct gtcgattccg tttgtagtcg tctgtttaac ctt
//
