LOCUS       NZ_CP140403             2096 bp    DNA     circular CON 09-JAN-2024
DEFINITION  Salmonella enterica subsp. enterica serovar Hadar strain
            PNUSAS295274 plasmid unnamed1, complete sequence.
ACCESSION   NZ_CP140403
VERSION     NZ_CP140403.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN30524885
KEYWORDS    RefSeq.
SOURCE      Salmonella enterica subsp. enterica serovar Hadar
  ORGANISM  Salmonella enterica subsp. enterica serovar Hadar
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 2096)
  AUTHORS   Hergert,J., Casey,R., Wagner,J., Young,E.L. and Oakeson,K.F.
  TITLE     Pathogen: clinical or host-associated sample
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2096)
  AUTHORS   Hergert,J., Casey,R., Wagner,J., Young,E.L. and Oakeson,K.F.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-DEC-2023) Utah Public Health Laboratory, Utah Public
            Health Laboratory Infectious Disease submission group, 4431 S 2700
            W, Salt Lake City, UT 84129, USA
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Method              :: Unicycler v. 0.5.0
            Genome Representation        :: Full
            Expected Final Version       :: Yes
            Genome Coverage              :: 100.0x
            Sequencing Technology :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            ##Genome-Annotation-Data-START##
            Annotation Provider          :: NCBI RefSeq
            Annotation Date              :: 01/08/2024 10:23:42
            Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline
            (PGAP)
            Annotation Method :: Best-placed reference protein set; GeneMarkS-2+
            Annotation Software revision :: 6.6
            Features Annotated           :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                :: 1
            CDSs (total)                 :: 1
            Genes (coding)               :: 1
            CDSs (with protein)          :: 1
            Genes (RNA)                  :: 0
            tRNAs                        :: 0
            ncRNAs                       :: 0
            Pseudo Genes (total)         :: 0
            CDSs (without protein)       :: 0
            ##Genome-Annotation-Data-END##
            REFSEQ INFORMATION: The reference sequence is identical to
            CP140403.1.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2096
                     /organism="Salmonella enterica subsp. enterica serovar
                     Hadar"
                     /mol_type="genomic DNA"
                     /strain="PNUSAS295274"
                     /serovar="Hadar"
                     /sub_species="enterica"
                     /db_xref="taxon:149385"
                     /plasmid="unnamed1"
                     /collection_date="2022"
     gene            1040..2029
                     /locus_tag="U2S72_RS00005"
                     /old_locus_tag="U2S72_22820"
     CDS             1040..2029
                     /locus_tag="U2S72_RS00005"
                     /old_locus_tag="U2S72_22820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001362017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein rep"
                     /protein_id="WP_024136759.1"
                     /translation="MKNPDLQNLTDYSPSDAPWDAHRSVSDDVGGIYLLAAEYERYGAR
                     MALCGGLLRFGWSTLKETGETRLRLREAHFCRVRHCPVCQWRRSLMWQARFYQSLPRIV
                     ADYPDARWMFLTLTVRNCAIGELGEMLNRMNAAFQRMKVRKEFRPVQGWIRTTEVTRGS
                     DGSAHPHFHTLMMVPPGMLNGKSYVRHERWVELWRECLRVDYDPNVDVRAVKPRKPKGG
                     ESLACATAELVRGAVAETLKYSTKPADMVADPEWFLELTRQTHKRRFVATGGALKDVLK
                     LDQETDADMVIGDDISEGDDDGSRIAFEWKTEVRKYRRSPTKDKTESG"
                     /name="protein rep"
     Typing          complement(1756..1947)
                     /name="ColpVC"
                     /typing="replicon"
                     /tool="MOB-suite"
                     /identity="98.964"
                     /coverage="100.0"
                     /evalue="6.14e-93"
ORIGIN
        1 ttacacatcc tgtcccgaaa attcccgccg tttctcggtt ttttgagcgt cgcagaccgc
       61 acgacaaacg aacctaaggt gagtttgtat aagtgcgcac ttcgtgagat tccctgactg
      121 ccagtttgtc gattgcgcgg aacggctgcg gcacgaaaac ggcaaaatga tttactcgcc
      181 gtttgtgtgg gttgttttgt ggggtgtcaa tggggttgtg gtcttttttg tgggttaaag
      241 tgtgggtgat tgtgtgggct gtgtgttttg agttgtgggt gattatgtgg gtcattgtgt
      301 gggctgtatg cacggcattt ttttgttctc ctaaaacaca ggcacgataa gcggcgtaca
      361 caaaacgggg cgtttcgctc cgtcgcttgt gccaaagggg acaccccttt gcaaccctgt
      421 gcggttctac gaacctggtc aggactgcgc cccgacaccc cgccaacgcc tcacggaacg
      481 cgaaaaaatt ccgcgtaccg ttcaccgttc cctgattcgt caaacagaaa atcgcggggg
      541 cccgcgcctc cggcgtgggt tccgattttg tgattgacga cggcacggga aaaacactgg
      601 ggatggtggt tggtgtcacg cagtgaggcc aaccacctgc aagacggttt tttttgttgt
      661 tcacaaaatc ggggtgaaag tctgtggatg agatgggtgt aagtgggtgg ggttgggtgt
      721 tttgggttac tgaaaatccc gctcaaaatt caagcgaatc tcgcgcgcga tccttgtatt
      781 tatacttaag ggataactct aggattcaaa ttcgcctcca gcccttgtgc cgcaaggcct
      841 gaagggggat ttgtcggaaa atggttttgg agttattctg tcgggagtgg tcgcattaaa
      901 agcgaccccc gcaacgaggg caatcgttcg ggggtgtgac cacctgtagg aattcgaatt
      961 ggtgatacga ctaacacaac aggtgatatg gcaatgataa cacgtcagat gagccatcgc
     1021 ccactatcgg gtggtgcgca tgaaaaaccc tgatctccag aacctcacgg actattcccc
     1081 ctcagatgcg ccctgggacg ctcacagaag cgtttctgat gacgtgggag ggatttacct
     1141 gcttgcagcc gaatatgagc gctacggggc gcgtatggcc ctctgtggtg gtttactgcg
     1201 tttcgggtgg tctaccctca aggaaaccgg agaaacgcgt ctgaggctgc gtgaggcgca
     1261 tttctgccgt gtccggcatt gtcctgtctg ccagtggagg cgctccctga tgtggcaagc
     1321 ccgtttctac cagtccctgc cgcgtatcgt ggcggattat cccgatgccc gctggatgtt
     1381 cctgactctg accgtgcgca actgtgcgat cggggagctg ggcgagatgc tgaaccggat
     1441 gaatgcagct tttcagcgca tgaaggttcg caaggagttc cggcctgtgc agggctggat
     1501 acgtaccacg gaagtcaccc gcgggagcga cggcagcgca cacccgcact tccacaccct
     1561 gatgatggtg ccgcctggca tgctaaatgg gaaaagttac gtcaggcatg aacgctgggt
     1621 tgaactctgg cgggagtgtc tgcgggtcga ttatgacccg aatgttgatg tccgggcagt
     1681 gaaacctcgt aagccgaagg gcggcgaatc gctggcctgc gcgaccgccg aactggtgcg
     1741 cggtgcggtg gccgaaaccc tgaaatattc cacgaagccg gctgacatgg tggccgatcc
     1801 tgaatggttc ctcgaactga cccgccagac gcacaagcgc cgctttgtgg cgaccggcgg
     1861 cgcactcaaa gacgtgctga aactcgatca ggaaactgac gccgacatgg tgatcggtga
     1921 tgatatttcc gagggcgacg atgacggttc acgaatcgcg ttcgagtgga aaaccgaggt
     1981 cagaaagtac cgtcgctcac cgacgaaaga taaaactgaa tcaggctagc ggggtgtcgg
     2041 ggtgcacccc tgaccagatg gcaattgtga tagcgtcgcg tgtgacggta ttacaa
//
