LOCUS       NZ_CP139376             2334 bp    DNA     circular CON 07-DEC-2023
DEFINITION  Klebsiella aerogenes strain C51857 plasmid pC51827_2k, complete
            sequence.
ACCESSION   NZ_CP139376
VERSION     NZ_CP139376.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN38378423
            Assembly: GCF_034119945.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella aerogenes
  ORGANISM  Klebsiella aerogenes
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Klebsiella/Raoultella group; Klebsiella.
REFERENCE   1  (bases 1 to 2334)
  AUTHORS   Li,X.
  TITLE     Klebsiella aerogenes C51827 Genome sequencing and assembly
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2334)
  AUTHORS   Li,X.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-NOV-2023) Laboratory Medicine Center, Department of
            Clinical Laboratory, Zhejiang Provincial People's Hospital
            (Affiliated People's Hospital, Hangzhou Medical College), Shangtang
            road, Hangzhou 310014, China
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Method                   :: Unicycler v. v0.4.8
            Genome Representation             :: Full
            Expected Final Version            :: Yes
            Genome Coverage                   :: 200.0x
            Sequencing Technology             :: Oxford Nanopore
            ##Genome-Assembly-Data-END##
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Date                   :: 12/07/2023 12:48:36
            Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline
            (PGAP)
            Annotation Method :: Best-placed reference protein set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,155
            CDSs (total)                      :: 5,033
            Genes (coding)                    :: 4,936
            CDSs (with protein)               :: 4,936
            Genes (RNA)                       :: 122
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 87
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 97
            CDSs (without protein)            :: 97
            Pseudo Genes (ambiguous residues) :: 0 of 97
            Pseudo Genes (frameshifted)       :: 49 of 97
            Pseudo Genes (incomplete)         :: 57 of 97
            Pseudo Genes (internal stop)      :: 13 of 97
            Pseudo Genes (multiple problems)  :: 20 of 97
            ##Genome-Annotation-Data-END##
            REFSEQ INFORMATION: The reference sequence is identical to
            CP139376.1.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2334
                     /organism="Klebsiella aerogenes"
                     /mol_type="genomic DNA"
                     /strain="C51857"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:548"
                     /plasmid="pC51827_2k"
                     /geo_loc_name="China:Hangzhou"
                     /lat_lon="29.86 N 121.56 E"
                     /collection_date="2018-01-10"
                     /collected_by="Longjie Zhou"
     gene            331..1308
                     /gene="mobV"
                     /locus_tag="SM788_RS25770"
                     /old_locus_tag="SM788_25770"
     CDS             331..1308
                     /gene="mobV"
                     /locus_tag="SM788_RS25770"
                     /old_locus_tag="SM788_25770"
                     /inference="COORDINATES: protein motif:HMM:NF013258.3"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006310 - DNA recombination [Evidence IEA]"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MobV family relaxase"
                     /protein_id="WP_320892990.1"
                     /translation="MAKFAIMRCKKLGNMGSVAKSLNHAFRERETLNADPTKTIDNEHM
                     AASSTDEAMGKLRARLPEKRRKDAVVCVEYMMTASPEWWQTASKQQQTEFFDKSLKWLT
                     DKYGAENVIVASVHRDETSPHMTAFVAPITKDGRLSAKDCIGNKTQMSNDQTTFAGAVS
                     HLGLERGIEGSKAKHQTIKAFYAAIEKPTRDVTITKDDLKPRVVGKRFLTSTYENSDDV
                     AERLTRAVRKTYEPAVIGAAGAQEMASKVKSAQDTALHLRERLRPFEEVLRPLNKPMRE
                     KAIATIKIIGEKLKLEQQELEKQRKELLRSQRGIRKPKSKGIER"
                     /name="mobV"
     gene            complement(1507..2016)
                     /locus_tag="SM788_RS25775"
                     /old_locus_tag="SM788_25775"
     CDS             complement(1507..2016)
                     /locus_tag="SM788_RS25775"
                     /old_locus_tag="SM788_25775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001027759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WP_320892989.1"
                     /translation="MLLIQGAKNKSGKVVFQKETESIDRSTGELTKTVEESIVRFNKEP
                     PYIKMYIEDLCAIANAPNSLKDVLLLSLRKLDYDGYINLSTRYRKQMCIELGIKDGTLR
                     NRLSQLVKRGFIESVGGNEYLANPNLFARGEWKDIVEQRIAFEMRIRYMPDGEKILSTA
                     QVEISE"
                     /name="hypothetical protein"
ORIGIN
        1 actgcggcga gcggtcggat cgtttttttg gtgattactt ttcgattgct gatttcgtca
       61 agggcgagcg aatagcgagt gcatttaccc ttgacgactc aaaccgaaaa acacgcttat
      121 caggggtgat tggtttcacg aagtgaggcc aatcacctgc cagacgcttt tgattttgac
      181 ctgtgttttt ttgtgtcgaa cagcgtgaga ccgaacgatt ttgcgaagca aagtctagtg
      241 agtatactat tacccaatag tagcccgccg gaggcttcgc aatgcgatcc ctcgacaggc
      301 cgaaacggac acggacgaga gagggtcagc atggcgaaat tcgctatcat gcgatgcaag
      361 aagttgggga acatggggag tgttgcgaag tcgctgaacc atgcgttcag ggagcgcgaa
      421 acgcttaatg ctgacccaac gaaaaccatc gacaacgaac acatggcggc atcttcaacc
      481 gatgaagcga tggggaagtt gcgcgcgaga ttgccagaaa agcgccgcaa ggatgcggtg
      541 gtttgcgtcg agtacatgat gacggcaagc cctgagtggt ggcaaacggc atccaagcag
      601 cagcaaacag agtttttcga caagtcgctc aagtggctca cggacaagta cggcgctgaa
      661 aacgtaattg tggccagtgt tcaccgtgat gaaacaagcc cacacatgac ggcatttgtt
      721 gccccgatca ccaaagacgg acgcttatca gccaaggact gcatcggcaa taaaacccag
      781 atgtcgaatg accaaaccac atttgccggc gctgtaagcc acttagggct tgagagaggc
      841 atcgagggaa gcaaagcaaa gcaccaaacg attaaggcat tctatgcagc gatagagaag
      901 ccaaccaggg acgtgacaat caccaaagat gatctcaagc ccagagtggt cgggaaaaga
      961 ttccttacta gcacgtatga aaactctgat gacgtagccg aaaggctcac cagagccgtg
     1021 agaaagacct atgagcctgc ggtcatagga gccgctggag cgcaagagat ggcctctaag
     1081 gtaaaatcag cccaagatac ggctttgcac cttagagagc gtctgaggcc gtttgaggag
     1141 gttttaaggc cgcttaacaa gccgatgcgt gaaaaggcaa tcgcaacaat caagattatt
     1201 ggtgagaagt tgaagttgga gcagcaagag ttagagaaac agcgcaagga gctgctccgt
     1261 tctcagcgtg gaatccgaaa acccaaatcg aaaggcatag aacgttagca ccgccacaaa
     1321 ttccctctga ttttttcaga gggcgcgctt agttgtttct cccttcgggt agaaacgcgc
     1381 gtgctgccgc aggctaaaaa cccaaagggc gcacttatgc aaactctgtt tgcgtgcgaa
     1441 aaaaatcccg cattgctgcg ggtttcgttt aacgccaaag gtgtgatcgg ttatctaatt
     1501 tttatcttat tcgctgattt cgacttgggc tgtgctaagg attttttcac cgtctggcat
     1561 atatctgatc cgcatttcga aagctatcct ttgctcaaca atatctttcc attcaccgcg
     1621 agcaaataag tttggatttg ctaaatattc gttaccacca acactctcaa taaatccacg
     1681 tttaactagc tgagatagtc tgttccttag ggttccgtcc ttgataccta actcaataca
     1741 catttgtttt ctgtatcgag ttgataggtt gatataacca tcataatcca gctttctaag
     1801 gctaagtaag agcacgtctt ttaaagagtt aggcgcatta gcaatagcgc ataggtcctc
     1861 gatatacatt tttatgtaag gcggttcttt gttgaatcgc acaatacttt cttcaacggt
     1921 ctttgttaat tcaccagtag agcgatcaat actttcagtt tctttttgga atacaacctt
     1981 gccagattta ttttttgccc cttgaatcaa taacattttt agccctgtca cttgaatgag
     2041 attacataaa gtatatacca aaatatccaa ttgtcaccta aaacaggtta cgcctatacc
     2101 gcccacacgt tacacctata ccgcccacac gttacaccta taccgcccac acgttacaac
     2161 tttggctctt aggccgcata tagcctgatt ctgttatcta ttatattagg gagggttatc
     2221 taactcggct tcagggcgta agcagaacat gctagttggg taatggtatt ccgcttcctc
     2281 gctttggttg ttcgttcctc ggaactacgt tcctgcggta cgcctcaacc aaag
//
