LOCUS       NZ_CP132735             1166 bp    DNA     circular CON 15-OCT-2023
DEFINITION  Escherichia coli strain LZSFT34 plasmid p6_FT34, complete sequence.
ACCESSION   NZ_CP132735
VERSION     NZ_CP132735.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN36942423
            Assembly: GCF_030846015.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 1166)
  AUTHORS   Zhang,L. and Li,Y.
  TITLE     Genomic characterization of bacterial isolates from hospital sewage
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1166)
  AUTHORS   Zhang,L. and Li,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-AUG-2023) School of Basic Medical Science, Southwest
            Medical University, No.1 Section 1,Xiang Lin Road,Longmatan
            District, Luzhou, Sichuan 646000, China
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Method                   :: Unicycler v. 0.5.0
            Genome Representation             :: Full
            Expected Final Version            :: Yes
            Genome Coverage                   :: 200x
            Sequencing Technology             :: Oxford Nanopore MinIon
            ##Genome-Assembly-Data-END##
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Date                   :: 10/15/2023 12:08:00
            Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline
            (PGAP)
            Annotation Method :: Best-placed reference protein set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,230
            CDSs (total)                      :: 5,112
            Genes (coding)                    :: 4,961
            CDSs (with protein)               :: 4,961
            Genes (RNA)                       :: 118
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 87
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 151
            CDSs (without protein)            :: 151
            Pseudo Genes (ambiguous residues) :: 0 of 151
            Pseudo Genes (frameshifted)       :: 63 of 151
            Pseudo Genes (incomplete)         :: 93 of 151
            Pseudo Genes (internal stop)      :: 25 of 151
            Pseudo Genes (multiple problems)  :: 31 of 151
            Pseudo Genes (short protein)      :: 3 of 151
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
            REFSEQ INFORMATION: The reference sequence is identical to
            CP132735.1.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1166
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="LZSFT34"
                     /isolation_source="hospital sewage"
                     /db_xref="taxon:562"
                     /plasmid="p6_FT34"
                     /geo_loc_name="China: Luzhou"
                     /lat_lon="28.89 N 105.44 E"
                     /collection_date="2021"
ORIGIN
        1 ttcgggaaac tgtgacagct cgagaaggtt cttgaagtgg cctgaagact catgcacact
       61 gaaaggactg gttctgttgt gctagcaaca gtttccacag gaacattgag gaggtcgaaa
      121 acctcaatga acccgaaacg gctcgccatc tggcgggctt ttttcgttct accctccaag
      181 aagacaaagc gcaagttaaa aacaacgaat ttgcacgctt ttacgcttca gaatgtcaaa
      241 aaacatgctt tccctcatcc gcaaccccaa aaacgcgtca gaaagcttct gagtgcgttg
      301 catagctatg cacggaacag attcacgatc gatttcgcgc gttccgtgta tcaaacaggt
      361 caaaattgca cgtttccctc tctggaaacg gtgaacgggg cgcgaaattt tttcgcgtgc
      421 cgtgaggcgt tgagcaagcg gaagcgcgcc agtcatctca acgccgaccg acgcgttggc
      481 tgccgttcag ccctccgcag gagcgcacat gtttcttccc gaagggagaa acatataagt
      541 gcgcatatct ctaatttcac aaatttgaga tatgaagcca cgaacccgaa gcaaaggagc
      601 gtacgtgctc aaattggcta ccggttctct tccgcttcct cgtcgattcg ctcgctccgc
      661 tcggtcatcg acttgcggcg agcggagtga tctctctcgt agtggttcag atctgttttt
      721 tttttttgcg ttgaagctgt ctgtgattgc agtgctgtag gtgtctgtgc cacatgccag
      781 atggtgaagg gaggagagaa acggcaacaa ctcacccctc ccaactaagg gacgggtagt
      841 ttgccgtttt cgatatgcca gacggagcca gggccatcga tcacggagcg cgtcagtgga
      901 agaacccgcg cctgcgtgac gtatgcgtct gcgccgcacc atctcacccg tcacgccacc
      961 acacaccggg aactgcgccc aagggctaac ccacccaatc tagacgctct acatgccgtt
     1021 tttgtggcaa ctcatcaggt gtccgctgtt gatgaaactc tcttcgccgg taacggaatt
     1081 ctcacgcgtg cggtcgccgt cgtcacttct cccccaaccg caaacggtct tcgcaaatac
     1141 gcaactgcgg atctgctcaa acttga
//
