LOCUS       NZ_CP126752             1697 bp    DNA     circular CON 21-APR-2024
DEFINITION  Enterobacter hormaechei strain Ehh_25 plasmid pEh25_6, complete
            sequence.
ACCESSION   NZ_CP126752
VERSION     NZ_CP126752.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN35394416
            Assembly: GCF_030848345.1
KEYWORDS    RefSeq.
SOURCE      Enterobacter hormaechei
  ORGANISM  Enterobacter hormaechei
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.
REFERENCE   1  (bases 1 to 1697)
  AUTHORS   Dona,V., Nordmann,P., Kittl,S., Schuller,S., Bouvier,M., Poirel,L.,
            Endimiani,A. and Perreten,V.
  TITLE     Emergence of OXA-48-producing Enterobacter hormaechei in a Swiss
            companion animal clinic and their genetic relationship to clinical
            human isolates
  JOURNAL   J Antimicrob Chemother 78 (12), 2950-2960 (2023)
   PUBMED   37923369
REFERENCE   2  (bases 1 to 1697)
  AUTHORS   Dona,V., Nordmann,P., Kittl,S., Schuller,S., Bouvier,M., Poirel,L.,
            Endimiani,A. and Perreten,V.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-MAY-2023) Institute of Veterinary Bacteriology,
            University of Bern, Laenggassstrasse 122, Bern 3012, Switzerland
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Method                   :: Unicycler v. v0.4.8
            Genome Representation             :: Full
            Expected Final Version            :: Yes
            Genome Coverage                   :: 95x
            Sequencing Technology             :: Illumina; Oxford Nanopore
            ##Genome-Assembly-Data-END##
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_030848345.1-RS_2024_04_21
            Annotation Date                   :: 04/21/2024 14:25:09
            Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline
            (PGAP)
            Annotation Method :: Best-placed reference protein set; GeneMarkS-2+
            Annotation Software revision      :: 6.7
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,243
            CDSs (total)                      :: 5,128
            Genes (coding)                    :: 4,986
            CDSs (with protein)               :: 4,986
            Genes (RNA)                       :: 115
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 84
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 142
            CDSs (without protein)            :: 142
            Pseudo Genes (ambiguous residues) :: 0 of 142
            Pseudo Genes (frameshifted)       :: 48 of 142
            Pseudo Genes (incomplete)         :: 109 of 142
            Pseudo Genes (internal stop)      :: 20 of 142
            Pseudo Genes (multiple problems)  :: 29 of 142
            Pseudo Genes (short protein)      :: 1 of 142
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
            REFSEQ INFORMATION: The reference sequence is identical to
            CP126752.1.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1697
                     /organism="Enterobacter hormaechei"
                     /mol_type="genomic DNA"
                     /strain="Ehh_25"
                     /isolation_source="rectal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:158836"
                     /plasmid="pEh25_6"
                     /geo_loc_name="Switzerland"
                     /collection_date="2019-11-06"
     gene            567..767
                     /locus_tag="QPR60_RS26215"
                     /old_locus_tag="QPR60_26165"
     CDS             567..767
                     /locus_tag="QPR60_RS26215"
                     /old_locus_tag="QPR60_26165"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WP_073553799.1"
                     /translation="MLKKDDIILIKSYGNEKTKIFLRGVNEVLMIDASFEEVKFAINND
                     LQDLQDLQGMQAVSAPLKIVT"
                     /name="hypothetical protein"
ORIGIN
        1 gccccgtgac agaatcacag ggcttcggta ctctaattct tcgcagatac ctgccaggat
       61 cagacgtgag aatctaaatc ctagcagggc tggctagcga tgtcactacc agcttaatac
      121 cattcaacga cattaaaatc atatctgcac cttagacgct caggtctacg ccccggactc
      181 cggcaggata aacaggcaaa ttggtgggaa cgtaacttaa ccgcgaaaga gttaggctct
      241 accccgtctc gctgtacgat aacaagcacc tgataaaatg agcgaataag acagcagtaa
      301 gcggcaaagt gtgattctca gacgtcagca cagcgcccac acaatcaaac cttttgcagg
      361 gtgagacaca caagaaacga gctagacgaa ggtcgctacg ctccccgtga tttttatata
      421 cccaccacgg gggcattagg attttttttg ttttttttgt atgtacaaac tcaaggattt
      481 aggaataatc tcaatcccct taacaagcac atgcaaaaaa aaccatgacg atgcttcatc
      541 tcaaaacaat aagtaacgaa agtatcatgc taaaaaaaga tgatattatc ctaataaaat
      601 catatggtaa cgaaaaaaca aaaatatttt tacggggtgt gaatgaggtt ctaatgattg
      661 atgcgagctt tgaagaggta aagtttgcta tcaataatga ccttcaggat cttcaggatc
      721 ttcagggaat gcaggcagta agcgcaccgc taaaaatagt aacctgattt ttagtaagag
      781 cactcaacat ttaccataac atccgttgcc cgcaccgcct gagaggccct cagggcgttt
      841 ctgaggcctc cggcctgaaa cacacacctt tctgtgacca tatcgagaaa aaacgcccct
      901 gatgattctg gcgcgactgc atggctatgc acggacatac ctggccggga ttttagccgc
      961 taaaatccga tgaacgccct gaaagccacc acgaaccacc ccgataacgg tgaacggatg
     1021 cgcaatttat tgcgtggccg tgaggcgttg ccggcgcagc cggaaaaccc gttttcagca
     1081 cgttcaggaa gggggtcgat gtacgaatgg ttcagggaac ggatctgagg tgatccggta
     1141 gttacttttt agtttatctg tagttttctt gtagtctgcc atcactaatg caaaacgttt
     1201 tttgtagttt atctgtagtt tttggttgct cagatggtca tgcaagcatg accatcaaag
     1261 aacaggacgc tttttagcca aataaccctt aacctacgga gagcgcccta ccaaaaatga
     1321 tgatttttta acccttaaat ggtcatacac ctaacgcagc cgcgattttc atcgcaacta
     1381 catgaattaa aagaaaaaaa aggaatattt cgttttcacg agtaataccc gggtattaaa
     1441 atccactgta attacatgaa aggaaagaaa taaagagtaa taccggggta ttactggcca
     1501 cgtataagtt tcgccatgtt catgactgac ttttgttgtt tgttcacgtt cagactccgt
     1561 gtgacagtgc ttatctcagc aaggtagata tgacgcttcc tcgcactgac agactccgct
     1621 agtcagtact gcggcgagcg ttactgaatt tcatgtgaag gagatgtttt tgattccggg
     1681 cctttaaatg tacaaaa
//
