LOCUS       NZ_CP118909             2311 bp    DNA     circular CON 03-MAY-2024
DEFINITION  Klebsiella pneumoniae strain T-hvKP plasmid p-T-hvKP-3, complete
            sequence.
ACCESSION   NZ_CP118909
VERSION     NZ_CP118909.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN33420516
            Assembly: GCF_029026345.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Klebsiella/Raoultella group; Klebsiella.
REFERENCE   1  (bases 1 to 2311)
  AUTHORS   Tang,B.
  TITLE     blaNDM-1 and NTUH-K2044 recipient strain
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2311)
  AUTHORS   Tang,B.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-FEB-2023) Department of Clinical Laboratory, Xiangya
            Hospital, Central South University, Xiangya road, changsha, hunan
            410000, China
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Method                   :: flye v. 2.9
            Genome Representation             :: Full
            Expected Final Version            :: Yes
            Genome Coverage                   :: 246.0x
            Sequencing Technology             :: Oxford Nanopore PromethION
            ##Genome-Assembly-Data-END##
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_029026345.1-RS_2024_05_03
            Annotation Date                   :: 05/03/2024 04:51:06
            Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline
            (PGAP)
            Annotation Method :: Best-placed reference protein set; GeneMarkS-2+
            Annotation Software revision      :: 6.7
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,419
            CDSs (total)                      :: 5,294
            Genes (coding)                    :: 5,141
            CDSs (with protein)               :: 5,141
            Genes (RNA)                       :: 125
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 89
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 153
            CDSs (without protein)            :: 153
            Pseudo Genes (ambiguous residues) :: 0 of 153
            Pseudo Genes (frameshifted)       :: 75 of 153
            Pseudo Genes (incomplete)         :: 82 of 153
            Pseudo Genes (internal stop)      :: 34 of 153
            Pseudo Genes (multiple problems)  :: 35 of 153
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
            REFSEQ INFORMATION: The reference sequence is identical to
            CP118909.1.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2311
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="T-hvKP"
                     /isolation_source="lab"
                     /db_xref="taxon:573"
                     /plasmid="p-T-hvKP-3"
                     /geo_loc_name="China: changsha"
                     /collection_date="2022-06-15"
     gene            1080..1478
                     /locus_tag="PXG78_RS27080"
                     /old_locus_tag="PXG78_27080"
     CDS             1080..1478
                     /locus_tag="PXG78_RS27080"
                     /old_locus_tag="PXG78_27080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000660103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="WP_258550859.1"
                     /translation="MKKDSFSGRWDEKALEMGWTAIPNALFFMQRPLNLSPTNFNVLLN
                     LFIHWWEAGTWPYPSQKGLASRMGVSVRTIQRALDEMTEMGFIKKTTTMRNHPRYKGRN
                     IYELTPVIHMIEIMAPELKKTIGKKKEI"
                     /name="helix-turn-helix domain-containing protein"
ORIGIN
        1 atgccgtttt tccataggct tcgccctcct gatgagcttc tcagaaatca ggcgatctcc
       61 ggtgctcaaa tcagaagagg cgaaacccga caggacttaa agatccccac cgtttccgat
      121 gggtcgctcc ctcgtgcgct ctcctgttcc caccctgagg tttacccgtt gcagaccgcc
      181 gtaaggtggc gttttctcat tcctacccgt gcaactgagt tccttgtagg tggttcgctc
      241 caagctgggc tgtatgcacg aactccccgt tcaacccgac tgccgcgtcc tcaaggtaac
      301 tgtaccctcg aatccaaccc tttcagacac gataaatcgc cagtggcggc agccattggt
      361 aacagagatg tgcgagagat attctgagaa ctcttgaagt agaagccaga ctgcggctac
      421 actggaggaa cagatttggt gacatgtctc gcacaagact gttaccacgg ttcaaaaact
      481 tgccggttga tgaaccatcg aaaaaccacc ttgccgggtg gttttttcgt tttcagggta
      541 cgcctgaaca gcaaatgccg tcaagacacc tgccctccac catgaaaaat aaacaaaaat
      601 gtttatttcc gctcaaaaaa tgagcagaaa atcatcatta ttgattgtaa ccattcgggt
      661 atacagaaaa gtgggatatg attgctggga tgcctgaaaa gaatggcagt tgcgggagag
      721 gcccacctct tcgctgcaac gaagaagcat ggcctctctg tgaatactca accgcagacc
      781 aggaggcgaa aatgctagaa gatactcttc aagcgctcat cgcgctgctc actttgctga
      841 gcatcattat gaagtactgt taatttggaa taatgctgta ttgcttcggc cgtcccttgt
      901 gggcggcctt ttttttagct gcaaaaagat cataggttgt aggatcccga caagcaatac
      961 gccacaatgt catactatat taatattaat atagatatat accggacagc tgtgtttaaa
     1021 tgcgccttat ctcatagaga taaggcgcat ttaaacacag ctgtccggtg atgtcacata
     1081 tgaaaaaaga tagtttcagt ggtcgttggg atgaaaaagc actagagatg ggttggactg
     1141 ccatcccaaa cgcgcttttc ttcatgcagc ggcctttaaa tctttcgcca acaaatttta
     1201 acgtgctact taatctcttc atacattggt gggaagcagg tacatggcct tatccatctc
     1261 agaaagggct agcgtctcgc atgggggtct ctgtcagaac gatccaacgt gctttggacg
     1321 aaatgactga gatgggattt ataaaaaaaa caacgacgat gaggaatcac cctagataca
     1381 agggaagaaa tatctatgaa ctaacccctg tcatccacat gattgaaatc atggcaccag
     1441 agttaaaaaa aacgattggc aaaaagaaag agatttaacc acttggtgtt taaaacaagc
     1501 gcgtatttac cataacatcc cttgcccgca ccccctgaga gcccctcagt gcgattctgg
     1561 cgcgggcggg ccatttccgg cacctttccc tgtccatatc gttaaaaatc gcgactgatg
     1621 attttggcgc acctgcatgg ctatgcacgc aggtgaatgg caggcggtta cagcataagc
     1681 gcgcggtgaa cgccccaaaa ggggcactct aatcacgcaa aactgctttg ccagataaag
     1741 atcaccgcgg cggcgatgct aagcagtgag ccgatgatac ccagcaccac gttaacatgg
     1801 cttaaaaatt caaagtccat gtaaacctcc actaaaaagg acgatacgtg atggccagtt
     1861 gactatcacg acagtattta gtgggaaaaa attaagcctc tgacatgaac cgctgagctg
     1921 acagcacagc tatggaaacg gtgaacgggc gcgaaatttt ttcgcgttcg tgaggcgttg
     1981 gcggggtgtc ggggcgcagc catgacgaag tgttttgggg atcgccaggc taaggcggta
     2041 ctccaaaaac acatcttgtc ccgttggttt tgtcgccggc gcgaagcggc ggtaatgaca
     2101 aaacatttcc tgtccgcatc agttagtgca aaaacgtaag tggtgaaaga ttgcagtaca
     2161 gagcgacagg agcctgagga agcaccggag aaattacgct tcctcggtca ttcgctcact
     2221 acgttcggtc atgactctgc ggcgagcgtt acgggctcaa tcgaagggca gtggaagtat
     2281 gagatgtgaa gtgtgaggag ttgctgcgga a
//
