LOCUS       NZ_CP118557             4047 bp    DNA     circular CON 04-APR-2024
DEFINITION  Enterobacter hormaechei strain 2020CK-00206 plasmid unnamed5,
            complete sequence.
ACCESSION   NZ_CP118557
VERSION     NZ_CP118557.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN15907141
            Assembly: GCF_028891505.1
KEYWORDS    RefSeq.
SOURCE      Enterobacter hormaechei
  ORGANISM  Enterobacter hormaechei
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.
REFERENCE   1  (bases 1 to 4047)
  AUTHORS   Young,E.L., Hergert,J., Casey,R. and Oakeson,K.F.
  TITLE     2020CK-00206
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4047)
  AUTHORS   Young,E.L., Hergert,J., Casey,R. and Oakeson,K.F.
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2022) Utah Public Health Laboratory, Utah Public
            Health Laboratory Infectious Disease Submission Group, 4431 S 2700
            W, Salt Lake City, UT 84129, USA
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Method                   :: Unicycler v. 0.5.0
            Genome Representation             :: Full
            Expected Final Version            :: Yes
            Genome Coverage                   :: 20.0x
            Sequencing Technology             :: Oxford Nanopore GridION
            ##Genome-Assembly-Data-END##
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_028891505.1-RS_2024_04_04
            Annotation Date                   :: 04/04/2024 07:07:29
            Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline
            (PGAP)
            Annotation Method :: Best-placed reference protein set; GeneMarkS-2+
            Annotation Software revision      :: 6.7
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,070
            CDSs (total)                      :: 4,955
            Genes (coding)                    :: 4,867
            CDSs (with protein)               :: 4,867
            Genes (RNA)                       :: 115
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 85
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 88
            CDSs (without protein)            :: 88
            Pseudo Genes (ambiguous residues) :: 0 of 88
            Pseudo Genes (frameshifted)       :: 36 of 88
            Pseudo Genes (incomplete)         :: 52 of 88
            Pseudo Genes (internal stop)      :: 18 of 88
            Pseudo Genes (multiple problems)  :: 17 of 88
            Pseudo Genes (short protein)      :: 1 of 88
            ##Genome-Annotation-Data-END##
            REFSEQ INFORMATION: The reference sequence is identical to
            CP118557.1.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..4047
                     /organism="Enterobacter hormaechei"
                     /mol_type="genomic DNA"
                     /strain="2020CK-00206"
                     /isolation_source="other"
                     /host="Homo sapiens"
                     /db_xref="taxon:158836"
                     /plasmid="unnamed5"
                     /geo_loc_name="USA"
                     /collection_date="2020-06-03"
     gene            complement(join(3127..4047,1..498))
                     /locus_tag="PWP98_RS25310"
                     /old_locus_tag="PWP98_25310"
     CDS             complement(join(3127..4047,1..498))
                     /locus_tag="PWP98_RS25310"
                     /old_locus_tag="PWP98_25310"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WP_137464447.1"
                     /translation="MYHKIIGGKKSKGQRNIKKSIEYLLREKNPEQQKDIKILSTTTKQ
                     DLINFENYILDKNKSNPYVCGVLSFEEKSISEELKTKLITEFEDILFAGIEQENRPPVM
                     WVEHNDKGRVELNYLTFNSLQDRRSYTVYLDKRDRGLVNNYSEIINYENNLSSPFEEKE
                     NKNTLTNKPKTNIPEDKKQFIENINTEIMALIINEELENREQTIKYIENMKGVKINRIR
                     KNQISIKSDLFDDDKPIVLKGDIYEEGRDYSDYRKEFNPKPTRDPEFVREKLTELKRTF
                     AERIEKREIRNRSKFKKPSFKNIPENRQSVQREDQDIGYKYTNGDFINVSNNDGFSGMY
                     IRTDNMEIVNNESINTEYKTKTATEETAGTTRTRDIEKINQQQQFVNSRLEEAGRKQQQ
                     FRKSIDTTEGRFGVCRRSVHSIISTFGRYIRTFSAYTRKNEHRQKFEKRRKIEEEKLKI
                     KNQGSYNRRRYKPY"
                     /name="hypothetical protein"
     gene            complement(500..847)
                     /gene="mobC"
                     /locus_tag="PWP98_RS25315"
                     /old_locus_tag="PWP98_25315"
     CDS             complement(500..847)
                     /gene="mobC"
                     /locus_tag="PWP98_RS25315"
                     /old_locus_tag="PWP98_25315"
                     /inference="COORDINATES: protein motif:HMM:NF017524.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="plasmid mobilization relaxosome protein MobC"
                     /protein_id="WP_048295903.1"
                     /translation="MSYKDRYNRKHSITLCFNDEEFAQVEELASMLKKPRATAVRDLIL
                     NKDFKLKKEIAKNKTGDVYFELHKIGVNINQIARAINTDIDKFISHEFSEDFLNLFEEI
                     TNEIEEIKRRI"
                     /name="mobC"
     gene            complement(1100..2512)
                     /locus_tag="PWP98_RS25320"
                     /old_locus_tag="PWP98_25320"
     CDS             complement(1100..2512)
                     /locus_tag="PWP98_RS25320"
                     /old_locus_tag="PWP98_25320"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WP_113519630.1"
                     /translation="MIRLKKVFNLTEEEIVLTNEIAEAISKEPTVETHEVNINFIDVLP
                     IIPNPHNLGLSKDIDPLSLIYSKFITQTDIPPALPVFSFLSYLSAFSVNNNIMYKHPTS
                     PADYLNTWTLILAPSGAAKTTAAKIISSSIPKDIEENPMIKPNFEGADGSAAFISELAK
                     AEKKIDNFGKPIQPIFWIEDEYSQFMKKLMPGGSMVETRKTMLKIHDNDKARRVTKNDT
                     IETESIVMSGLFLNTIDSFARNFDQESINDGLGRRHNFVYAERGEKVVPTWTVDQIIES
                     LKEGLDDFFTTVKTNVIYTYSPECRKIYDHFYMVYKEKFDHILGEETNGTFFRTYFMLS
                     WKYAAIYHILLKQEGTEIQAKSFDYGIKVSLMFLSSIKRFLDYKVDLKSGAKQVRKEYL
                     QKAAEKELNNLQKYKEFLLDNIEISLRDFNRKFNIKKIESLKILKTIRENKLIKYHPLF
                     EVLAKEEAKAKK"
                     /name="hypothetical protein"
ORIGIN
        1 gtttttattt tctttctctt cgaatggact tgataaatta ttttcataat taattatttc
       61 agagtagtta tttactaatc cacgatctct tttatctaaa tatacagtgt atgatcttct
      121 gtcttgtaaa ctgttaaatg ttaaataatt taactctacc ctgcccttgt cgttgtgttc
      181 tacccacata actggaggtc tgttttcttg ttcaatccct gcaaataaaa tatcttcaaa
      241 ctctgtaatt aatttagttt ttaattcttc tgatatggat ttttcttcaa atgataaaac
      301 accacacaca tatgggtttg atttgttttt atctaaaata taattttcaa aattgattag
      361 gtcttgtttt gtggttgttg ataatatttt tatgtctttc tgttgttctg ggtttttctc
      421 tctcaataaa tattcaatac ttttttttat atttctttga cctttacttt ttttacctcc
      481 tattatttta tggtacatat tatattctcc tttttatttc ttctatctca tttgttattt
      541 cctcaaacaa atttaaaaaa tcttctgaaa actcatggga aataaattta tcaatatcag
      601 tatttattgc tcttgcaatc tggttaatgt ttactcctat tttatggagt tcaaaatata
      661 catcaccagt tttatttttt gctatttctt ttttgagttt aaaatcttta ttgagaataa
      721 gatctctaac ggctgttgct ctgggttttt tcaacataga agccagttct tcaacctgtg
      781 caaattcttc atcattgaag cacagggtta tgctgtgctt cctgttgtat ctatccttat
      841 agctcatcct atgcctcctg tgttgggttt taaggggatt gaagggggaa cccctcacaa
      901 gcgacaatac gaagtattgt ctgagcttgc tgttatatag ttttacactt atatattaat
      961 taatacatat aaaaattaag tcaatacctg aataaaaaat aatcaaatca aatttgggtt
     1021 ttatatataa ccgtgaacaa ataaagccat ttgtaaaatg gcttttttgt gaggggttga
     1081 cctgtccggt aggacggttt tatttttttg ctttggcttc ttcttttgct aacacttcaa
     1141 acaatggatg atattttatt aatttatttt ctctgattgt tttaagtatt tttagacttt
     1201 cgatcttttt aatattaaat tttctattga agtctcttaa tgaaatttca atattatcaa
     1261 gcaaaaactc tttgtatttt tgtaaattat ttaattcttt ttctgctgct ttttgtaaat
     1321 attctttcct tacttgttta gcaccagatt ttaaatctac tttataatct aaaaaccttt
     1381 ttatactgga taaaaacatt aatgaaactt taatcccata atcaaaagat tttgcctgaa
     1441 tctcggttcc ttcttgtttt aataaaatat gatatattgc tgcatatttc caactcaaca
     1501 taaaataagt tctgaaaaat gttccgtttg tttcttctcc taatatatga tcaaattttt
     1561 ccttataaac catataaaaa tgatcataaa tctttctaca ttctggggaa tatgtataga
     1621 ttacgtttgt tttaacagta gtgaagaaat catctaatcc ctctttgaga gattcgatga
     1681 tctgatctac tgtccaagtt gggacaactt tttcccctct ttcagcataa acaaaattat
     1741 gtcttcttcc taacccatca ttaatacttt cctgatcaaa gtttctcgca aaactatcaa
     1801 tagtattcaa aaataaacca ctcataacga tactttcagt ttcaatagta tcgtttttcg
     1861 taactctacg ggctttatca ttatcatgga tttttaacat cgtttttctg gtttcaacca
     1921 tagaacctcc cggcattaat tttttcataa actgggagta ttcgtcttct atccagaaaa
     1981 tcggctgtat tggttttccg aaattatcaa ttttcttttc tgcttttgcc aactctgaaa
     2041 tgaatgctgc cgaaccgtca gcaccttcaa aattgggttt aatcattggg ttttcttcta
     2101 tatcttttgg tatagagctt gaaataattt tggctgctgt ggtttttgct gcacctgacg
     2161 gtgcaagtat taaagtccaa gtattcaagt aatccgctgg gcttgtaggg tgtttataca
     2221 ttatattatt attaacacta aaagcactta aataacttaa aaaagagaat acaggtaaag
     2281 caggtggtat atctgtttga gtaataaact tagaatatat taaagataat ggatctatgt
     2341 cttttgataa acctaaatta tgggggtttg gtattatagg taaaacgtca ataaaattta
     2401 tattcacttc gtgggtttct actgttggct ctttgctaat tgcttctgct atttcgtttg
     2461 ttaaaactat ttcttcttct gttaaattaa aaactttttt taatcttatc ataataaaat
     2521 ctcctattat atctattata taattagtta taacataagg ttttaacttg tcaataatat
     2581 ttttacaaaa aaatatgaca cattccaaaa tgtcttattt tttggttggt ttttgcgaag
     2641 ccaaaaacat accacccccc ccctgtttga cactatgaca ttatgacaaa tcacgtaaca
     2701 tactgatttt aaagggttaa aaaaaatttt tgtcatagat ttgtcataaa aaatctaaca
     2761 acctttgaca aaagagaaga catttttcgt aatgtattga tgtataaaga aaaaataatc
     2821 tttctcggtg tcattagttt tatgacaaaa tcaaaaatta aaaaacaggc aattttataa
     2881 cctgttttgt cataaaatat cccgttttta tttttgactc aatggatttt aaggtgtcgg
     2941 atcttttttg gaaaatatct gacaagtttt cttggttttt tctgacactc tgacagattt
     3001 ctgacagaaa accgtcctac cggacaggtc aacccctcac aagcaagaac cagcctgacg
     3061 gctggctctc acttgttcac ggttaaagtt ttatcatagt gatctagtag tgttgtcatc
     3121 atatttttaa tatggtttat atcgtcttct gttgtaactt ccctgatttt tgattttgag
     3181 tttttcttct tcgatttttc gtcttttttc gaatttttgt ctgtgttcat tcttccttgt
     3241 atatgctgaa aacgttcgta tgtatcttcc aaaagtagaa ataattgagt gtacagatct
     3301 tctacatact ccaaatcttc cctcagttgt atcaatcgac tttctgaatt gctgttgttt
     3361 tcttccagct tcttcaagtc tcgaattaac aaattgttgt tgctgattaa ttttttcaat
     3421 atctcttgtt cttgtagttc ctgctgtttc ttctgttgct gttttagttt tatattctgt
     3481 attaattgac tcattattta caatctccat attatcagtg cgaatataca tacctgaaaa
     3541 accatcgtta ttactaacat tgataaaatc gccgttagta tatttatatc caatatcttg
     3601 atcttctctt tgaacacttt gtctattttc tggtatattt ttgaacgatg gttttttaaa
     3661 ctttgatcta tttctgattt ctcgtttttc aattctttct gcaaatgttc ttttaagctc
     3721 tgtgagtttt tctctaacaa actctggatc tcttgtaggt tttgggttga attcttttct
     3781 ataatcgctg taatctcttc cctcttcata tatatctcct ttcaggacaa tgggtttatc
     3841 gtcatcaaac aaatcagatt taattgatat ttgatttttt cgtattctgt ttattttaac
     3901 acctttcata ttttcaatat atttgatggt ttgttctcta ttttccaact cttcattaat
     3961 aattaatgcc attatttcag tattaatatt ttcaataaat tgttttttat cttctggaat
     4021 attggttttt ggtttgttgg ttaatgt
//
