LOCUS       NZ_CP117756             4258 bp    DNA     circular CON 25-MAR-2024
DEFINITION  Enterobacter hormaechei strain 2022CK-00700 plasmid unnamed6,
            complete sequence.
ACCESSION   NZ_CP117756
VERSION     NZ_CP117756.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN32093416
            Assembly: GCF_028622735.1
KEYWORDS    RefSeq.
SOURCE      Enterobacter hormaechei
  ORGANISM  Enterobacter hormaechei
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.
REFERENCE   1  (bases 1 to 4258)
  AUTHORS   Hergert,J., Casey,R., Wagner,J., Young,E.L. and Oakeson,K.F.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-FEB-2023) Utah Public Health Laboratory, Utah Public
            Health Laboratory Infectious Disease Submission Group, 4431 S 2700
            W, Salt Lake City, UT 84129, USA
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Method                   :: Unicycler v. 0.5.0
            Genome Representation             :: Full
            Expected Final Version            :: Yes
            Genome Coverage                   :: 99.0x
            Sequencing Technology :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_028622735.1-RS_2024_03_25
            Annotation Date                   :: 03/25/2024 02:00:25
            Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline
            (PGAP)
            Annotation Method :: Best-placed reference protein set; GeneMarkS-2+
            Annotation Software revision      :: 6.7
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,271
            CDSs (total)                      :: 5,156
            Genes (coding)                    :: 5,050
            CDSs (with protein)               :: 5,050
            Genes (RNA)                       :: 115
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 85
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 106
            CDSs (without protein)            :: 106
            Pseudo Genes (ambiguous residues) :: 0 of 106
            Pseudo Genes (frameshifted)       :: 22 of 106
            Pseudo Genes (incomplete)         :: 79 of 106
            Pseudo Genes (internal stop)      :: 15 of 106
            Pseudo Genes (multiple problems)  :: 9 of 106
            Pseudo Genes (short protein)      :: 1 of 106
            ##Genome-Annotation-Data-END##
            REFSEQ INFORMATION: The reference sequence is identical to
            CP117756.1.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..4258
                     /organism="Enterobacter hormaechei"
                     /mol_type="genomic DNA"
                     /strain="2022CK-00700"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:158836"
                     /plasmid="unnamed6"
                     /geo_loc_name="USA"
                     /collection_date="2022-11-04"
     gene            complement(join(3445..4258,1..686))
                     /locus_tag="PTC84_RS26310"
                     /old_locus_tag="PTC84_26310"
     CDS             complement(join(3445..4258,1..686))
                     /locus_tag="PTC84_RS26310"
                     /old_locus_tag="PTC84_26310"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="relaxase/mobilization nuclease domain-containing
                     protein"
                     /protein_id="WP_045348262.1"
                     /translation="MIVKFHPRGRGGGAGPVDYLLGKDRQREGASVLQGKPEEVRELID
                     ASPYAKKYTSGVLSFAEQDLLPGQREKLMASFERVLMPGLDKDQYSVLWVEHRDKGRLE
                     LNFLIPNTELLTGRRLQPYYDRADRPRIDAWQTIVNGRLGLHDPNAPENRRALVTPSAL
                     PEAKQEAAQAITRGLLALASSGELKTRQDVTEALESAGFEVVRTTKSSISIADPEGGRN
                     IRLKGAIYEQSFNAGEGLRAEIESAAAEYRRDAESRIQRAREVCQSGTERKREENQRRH
                     PRPRPEAVLSHEPAYERDAAHGQPDVADYRPGVRAADSLERGHSVVAESADTRQLHDHP
                     GAEEHAGNAVREEQRRAALDLRRAETPLREGEPGSGTVRRGFELDDTGGEIAHDGAGKT
                     VAERIRAATAGLLEKAGRVGERLRGMADDVWSYATGERGAERARHGLEQAGAEFERAAA
                     PVVVMLNGIEAHREQERAAQHQKALELERSQRQRTYNGPSL"
                     /name="relaxase/mobilization nuclease domain-containing
                     protein"
     gene            complement(676..999)
                     /locus_tag="PTC84_RS26315"
                     /old_locus_tag="PTC84_26315"
     CDS             complement(676..999)
                     /locus_tag="PTC84_RS26315"
                     /old_locus_tag="PTC84_26315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000957083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MobC family plasmid mobilization relaxosome
                     protein"
                     /protein_id="WP_012464820.1"
                     /translation="MLTMWVTEDEHRRLLERCDGKQLAAWMRQTCLDEKPARACKLPSI
                     SPALLRQLAGMGNNLNQIARQVNAGGGSAHDRVQIVSALMAINAGLERLRHAVLEKGAD
                     DDR"
                     /name="MobC family plasmid mobilization relaxosome protein"
     gene            1639..1752
                     /locus_tag="PTC84_RS26385"
     CDS             1639..1752
                     /locus_tag="PTC84_RS26385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005761324.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication initiation protein"
                     /protein_id="WP_071789001.1"
                     /translation="MHEPPVQSDCCALSGNYRLESNPVRHAKAPLAAATGN"
                     /name="replication initiation protein"
     gene            2138..3208
                     /locus_tag="PTC84_RS26320"
                     /old_locus_tag="PTC84_26320"
     CDS             2138..3208
                     /locus_tag="PTC84_RS26320"
                     /old_locus_tag="PTC84_26320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000646535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-dependent alcohol dehydrogenase family
                     protein"
                     /protein_id="WP_012464819.1"
                     /translation="MKAMVFYGENDVRFEERKKPEIINPGDAIIRMIKTTICGTDLGIL
                     KGKNPEIEKNAKEKTGSFNGRILGHEGVGIIEEIGSAVKNFKIGDKVIISCVSRCGTCD
                     NCQKQLYAHCRNDGGWIMGYMIDGTQAEFVRTPYADNSLYLFPDELNDDAGVLLSDALP
                     TAHEIGIQNGMVKPGDTVAIVGAGPVGMSCLLTGMLYSPSQLIMIDMDENRLAMAKDMG
                     ATHTINSAKENAINRVMELTNQRGVDCAIEAVGIEPTWNICQNIIKEGGHLANVGVHGN
                     PVSFAIEKLWIKNLTITTGLVNANTTGMLMKTCCSGKLATEKLATHHFNFNDIEKAYDV
                     FKHAADEKAMKVMINF"
                     /name="zinc-dependent alcohol dehydrogenase family protein"
     Typing          complement(1108..1190)
                     /name="MOBP"
                     /typing="oriT"
                     /tool="MOB-suite"
                     /identity="100.0"
                     /coverage="100.0"
                     /evalue="3.79e-36"
     Typing          1269..1752
                     /name="ColRNAI_rep_cluster_1987"
                     /typing="replicon"
                     /tool="MOB-suite"
                     /identity="88.415"
                     /coverage="93.0"
                     /evalue="4.61e-163"
     Typing          complement(4..686)
                     /name="MOBP"
                     /typing="relaxase"
                     /tool="MOB-suite"
                     /identity="96.053"
                     /coverage="99.0"
                     /evalue="5.16e-143"
     Typing          complement(3449..4257)
                     /name="MOBP"
                     /typing="relaxase"
                     /tool="MOB-suite"
                     /identity="91.481"
                     /coverage="99.0"
                     /evalue="8.76e-156"
ORIGIN
        1 atggctccct tcagtcggat gtttcgcccc ccctccgggt cggcaatact gatgctgctt
       61 ttcgtggtac gcaccacctc aaaacctgcg ctttccagcg cctcagtgac gtcctgacgg
      121 gttttcagct ccccggacga ggctaaggcc agtaagcccc gcgtaatcgc ctgagcggct
      181 tcctgcttcg cttccggcag cgcggaaggc gtgaccagcg cccgccggtt ttccggcgcg
      241 ttcgggtcgt gcagccccag cctgccgttc actatggtct gccaggcgtc aatgcgcgga
      301 cggtcggcgc ggtcgtaata cggctggagc cgcctgccgg tcagcagctc cgtgttcggg
      361 atcaggaagt tcagctccag ccgccccttg tcccggtgct caacccacag cacgctgtac
      421 tggtctttat cgagtccggg catcagaacc cgctcgaagc tcgccatcag cttttcgcgc
      481 tggccgggca gtaagtcctg ttcggcaaac gacaggacgc cggaggtgta ctttttggcg
      541 tagggcgagg cgtcgataag ctcccggact tcctccggtt taccctgcag aacgctggca
      601 ccttcgcgct ggcggtcttt tcccagcaga taatccaccg gcccggcccc gccgccgcgc
      661 ccccggggat gaaacttaac gatcatcgtc agctcccttt tccagtacgg catgccgcag
      721 ccgctcgagt ccggcattaa tggccatcag cgcggagact atctgcacgc ggtcgtgtgc
      781 gctgccgcca ccggcgttaa cttggcgggc aatctggttg aggttgttac ccataccggc
      841 gagctgccga agcagcgccg gcgagatcga cggaagtttg caggcgcgtg ccggcttctc
      901 gtccaggcac gtctgccgca tccaggctgc gagctgctta ccgtcgcagc gctccagcag
      961 acgccggtgc tcatcctcag tcacccacat cgtaagcatt ttgctgcgtt tatctgccaa
     1021 tcaggcctcc tgataacgcc gggacgggcg ggaaatactt tcccgatcgg cgcggtgttg
     1081 gacaagccgc aggcgcgtca gtggcttttg gcgggtttcg gggcgcagcc ctgaaccagt
     1141 cacgtagcgc tagcggagtg tatactggct taatatgttg gcatgagtgc tgtaatcagg
     1201 aaagtgcttc atgtgacagg tgtgatatgt agttcaggag cgtccgcaat agcatgcacg
     1261 gacatatgaa attacgcctc ctcgctcatt cgctcactac gttcggtcat gaggctgcgg
     1321 cgggcgttac cgactcacgg agaacaggat gacggaatag cgagggatca gtaagggccg
     1381 gaaaaaggat gcggcgttgc cgtttttcca taggctccgc ccccctgaca agcatcacga
     1441 aatctgacgc tcaaatcagt ggtggcgaaa cccgacagga cttaaagata ccaggcgttt
     1501 ccccctggtg gctccctcgt gcgctctcct gttcctgcca tccggtttgc cggtgtcatt
     1561 ccgctgttgt ggccgcggtt tctcattcca cgcctgacac tcggttccgg gaaggcagtt
     1621 cgctccaagc tggactgtat gcacgaaccc cccgttcagt ccgactgctg cgccttatcc
     1681 ggtaactatc gtcttgagtc caacccggta agacatgcaa aagcaccact ggcagcagcc
     1741 actggtaact gatttagagg agttagtctt gaagttatga gccagttaag gctaaactga
     1801 aaggacatgt tttggtgact gcgctcctcc aagccagtta ccgcggttca aagagttgct
     1861 gctctaagaa ccttcgaaaa aaccgccttg ctgggcggtt ttttcgttta ctgaccataa
     1921 gattacgacg agaaaaaaag gatctcaaga aggttctcac aaagatctga ttcgctttcc
     1981 agattttcgc ccccgcccag ccccaacgac ataagcacaa aaagcacaaa aagcacaaaa
     2041 agcacaaaaa gcacaaaaag cacaaaaaaa acaacaaaaa acaaacaaat gatacaatat
     2101 acaaacaaag taaacggatg cataaggtga tatacaaatg aaagctatgg ttttttatgg
     2161 tgaaaatgat gttcgttttg aggaacgaaa aaaaccagag ataatcaatc caggcgacgc
     2221 tattattcgc atgattaaaa ccacaatttg tggaacagat cttggaatat taaaaggaaa
     2281 gaacccagaa atagagaaaa atgcaaaaga aaaaacagga tcttttaatg ggagaatact
     2341 cggacatgag ggagttggta taatagagga aattggctca gcagttaaaa attttaaaat
     2401 aggtgataag gtaattattt cttgcgttag tcgttgcggc acctgcgata attgtcaaaa
     2461 acaattatat gcgcattgta gaaatgatgg tggttggatt atgggttata tgattgatgg
     2521 aactcaagct gagttcgtca gaacaccata tgcagacaac tctctttact tattccctga
     2581 tgaattaaat gacgatgccg gagttttact ttctgatgca ctacctacag cccacgagat
     2641 agggatccag aatggaatgg taaagcctgg tgacactgtt gctattgttg gggcgggtcc
     2701 tgttggaatg agttgcctac tcaccggcat gctttattcc ccatcgcagt tgatcatgat
     2761 cgatatggat gaaaaccgtt tggcaatggc taaagatatg ggggcaactc atactattaa
     2821 ctctgcaaaa gaaaacgcta ttaatagggt tatggaattg acaaaccagc gtggtgtcga
     2881 ttgtgcaatc gaagcagttg gaatcgaacc aacatggaat atttgtcaaa atattataaa
     2941 agaaggcggg catttagcaa acgttggtgt tcatgggaac cctgtgagtt ttgctatcga
     3001 gaagttgtgg ataaaaaacc tgacaataac aacaggtctc gttaatgcaa atacaacagg
     3061 aatgttaatg aaaacctgct gctcaggaaa actagcaaca gaaaaactcg ccactcatca
     3121 ttttaatttt aacgatatag aaaaagccta tgatgttttt aaacatgccg ctgatgaaaa
     3181 agcaatgaaa gttatgatta atttttaaaa aattagctag ctctcatgat gagtgtttaa
     3241 ttaaacataa catcccttgc ccgcaccgct ccgggcggat tgggcgcgaa tacggagcct
     3301 gccgggtaaa acccgcagca aagcacccgg gaaaccgcct ttttgcgtcc gataaatttc
     3361 cccggactgc atagccatgc agccgggtga atggctccgg ctttcagcgc agatgtccgc
     3421 cgaaagcccc attttatccg gttatcacag tgaagggccg ttatacgtcc gctgtcgctg
     3481 agatcgctcc agctccagcg ctttctgatg ctgcgccgcc cgctcctgct cccggtgtgc
     3541 ctctatcccg ttcagcatta cgacaaccgg cgcagctgct cgctcaaact ctgcacctgc
     3601 ctgctcaagc ccgtgacgcg ctcgctcagc gccgcgttct cccgttgcat aagaccagac
     3661 atcgtccgcc attccgcgaa ggcgctctcc cactcgtcca gccttttcga gtagtcctgc
     3721 tgtagctgct ctaatgcgct cagcaactgt ttttccagct ccgtcatgtg ctatttcccc
     3781 gccagtatca tccagctcga atcctctccg aaccgtcccg cttccgggtt caccttcacg
     3841 cagcggcgtc tctgctcgcc gcaggtcgag agctgcacgc cgctgttcct ctctgacagc
     3901 attgcctgcg tgctcttctg ctcccggatg gtcgtgtaat tgtcgagtat ctgctgactc
     3961 tgccaccaca gaatgcccgc gctcgaggct atcagcagcg cggacaccag gacgatagtc
     4021 agccacgtct ggctgaccat gcgcagcatc cctttcgtac gctggctcat ggctgaggac
     4081 agcttccggt cgtggtcgag gatggcggcg ctgattctct tctcgctttc gctcagttcc
     4141 gctctgacag acttctcgtg ctcgctgaat gcggctttca gcatctcgcc ggtactctgc
     4201 tgctgcgctt tcgatttctg ctctaagtcc ttcgccagcg ttaaaagact gttcatag
//
