LOCUS       NZ_CP114384             1887 bp    DNA     circular CON 07-APR-2024
DEFINITION  Acinetobacter baumannii strain AB6870155 plasmid pAB0155-3, complete
            sequence.
ACCESSION   NZ_CP114384
VERSION     NZ_CP114384.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN03105183
            Assembly: GCF_000794125.2
KEYWORDS    RefSeq.
SOURCE      Acinetobacter baumannii
  ORGANISM  Acinetobacter baumannii
            Bacteria; Pseudomonadota; Gammaproteobacteria; Moraxellales;
            Moraxellaceae; Acinetobacter; Acinetobacter calcoaceticus/baumannii
            complex.
REFERENCE   1  (bases 1 to 1887)
  AUTHORS   Eijkelkamp,B.A., Stroeher,U.H., Hassan,K.A., Paulsen,I.T. and
            Brown,M.H.
  TITLE     Comparative analysis of surface-exposed virulence factors of
            Acinetobacter baumannii
  JOURNAL   BMC Genomics 15 (1), 1020 (2014)
   PUBMED   25422040
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1887)
  AUTHORS   Semenec,L., Cain,A.K., Dawson,C., Liu,Q., Dinh,H., Lott,H.,
            Penesyan,A., Maharjan,R., Short,F.L., Hassan,K.A. and Paulsen,I.T.
  TITLE     Cross-protection and cross-feeding between ESKAPE pathogens
            Klebsiella pneumoniae and Acinetobacter baumannii promotes their
            co-existence
  JOURNAL   Unpublished
REFERENCE   3  (bases 1 to 1887)
  AUTHORS   Semenec,L., Hassan,K.A., Paulsen,I.T., Cain,A.K. and Dawson,C.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-DEC-2022) Natural Sciences, Macquarie University, 14
            Eastern Road, Macquarie Park, NSW 2109, Australia
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Method                   :: SPAdes v. 3.14.0
            Genome Representation             :: Full
            Expected Final Version            :: Yes
            Genome Coverage                   :: 282x
            Sequencing Technology             :: Illumina, OxfordNanopore
            ##Genome-Assembly-Data-END##
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000794125.2-RS_2024_04_07
            Annotation Date                   :: 04/07/2024 17:03:35
            Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline
            (PGAP)
            Annotation Method :: Best-placed reference protein set; GeneMarkS-2+
            Annotation Software revision      :: 6.7
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,881
            CDSs (total)                      :: 3,785
            Genes (coding)                    :: 3,721
            CDSs (with protein)               :: 3,721
            Genes (RNA)                       :: 96
            rRNAs                             :: 6, 6, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 6, 6 (5S, 16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 32 of 64
            Pseudo Genes (incomplete)         :: 33 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 13 of 64
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
            REFSEQ INFORMATION: The reference sequence is identical to
            CP114384.1.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1887
                     /organism="Acinetobacter baumannii"
                     /mol_type="genomic DNA"
                     /strain="AB6870155"
                     /isolation_source="Human sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:470"
                     /plasmid="pAB0155-3"
                     /geo_loc_name="Australia"
                     /collection_date="2002"
     gene            329..514
                     /locus_tag="NH10_RS19415"
                     /old_locus_tag="NH10_003858"
     CDS             329..514
                     /locus_tag="NH10_RS19415"
                     /old_locus_tag="NH10_003858"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WP_059212528.1"
                     /translation="MNRECALELIESRVDQHMNMPSELHRGFAMGLARFALESNLITVD
                     EYIAYCDRMNEVSYNA"
                     /name="hypothetical protein"
     gene            507..788
                     /locus_tag="NH10_RS19420"
                     /old_locus_tag="NH10_003859"
     CDS             507..788
                     /locus_tag="NH10_RS19420"
                     /old_locus_tag="NH10_003859"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016660580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WP_059212527.1"
                     /translation="MPNQTNSKRISISLNPEVYSVISDLADLQNKPMSRIVVELIEEMH
                     PTLVEITNALKEIKTSTNPNEVVKRFGQSAVIDTAEALGRMSKELKEL"
                     /name="hypothetical protein"
     gene            785..1816
                     /locus_tag="NH10_RS19425"
                     /old_locus_tag="NH10_003860"
     CDS             785..1816
                     /locus_tag="NH10_RS19425"
                     /old_locus_tag="NH10_003860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016543296.1"
                     /GO_process="GO:0006260 - DNA replication [Evidence IEA]"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage/plasmid replication protein, II/X family"
                     /protein_id="WP_059212526.1"
                     /translation="MIDWVTGKFCITHNPEVLRSGQSIRTKIVDGVETIEYDIANRLSV
                     KGSHDATITIRSHTDNTVEISGNPAKFLQGHNVFGTNDLKYLVAKMIDKLCMIDELELK
                     PTDVEYENIQSGIYQLSRVDVNEHFSFPSAQVARAWLRAAGNSANMKFRGAGLFKEGTL
                     YFTPQSRRFVPKIYFKYDEINSKDKSHRLPDELLQIPELVEYAEKSLRFEIKILSTQLK
                     DWMLHLGCNWDADTATMLINDQFINKLQLSANMAVDSEVLQSLPKNLRLTYTAWANGED
                     LRQVLSRPTFYRYRTKLLEHGVDISIVQDKEADQTNVVPMIRYLEAVPMGIPDWAYQKG
                     LVA"
                     /name="phage/plasmid replication protein, II/X family"
ORIGIN
        1 agtgtctacg agcgaactga cataattaga attacaaaac tcccctttcc ctgattacaa
       61 gctccctttt gccttagatc ggtaagtacc aggctatgcc tgccgacaac atgtaaacat
      121 gacaacatga acacatgaca acatgactac atgatcacag ttgcatggct gcgtgtggcg
      181 ttccatgaac gcacatcacc agacatgcga atgtgaggtg tttagtaata cctcacatct
      241 gtctcaattt gataactcaa cctatataca agacagtttt tatactatat atttactaca
      301 acctgcatca ctttagttgg aatatataat gaatagagaa tgtgctttag aacttataga
      361 aagccgtgta gatcaacaca tgaatatgcc aagtgaactt catagaggtt ttgctatggg
      421 tttagctcga tttgcactgg aatctaatct aattacagtt gatgaatata ttgcttactg
      481 tgatcgaatg aatgaggttt cctataatgc ctaatcaaac aaatagcaaa cgtatttcta
      541 ttagtcttaa tcctgaagtt tattcagtta tttctgatct tgctgatctt caaaataagc
      601 ctatgtctag aattgttgtt gaactaatag aggaaatgca tccaacgctt gttgagatta
      661 caaatgcatt aaaagaaatt aaaacatcta ccaatccaaa tgaagttgtt aaaagatttg
      721 gtcaaagtgc cgttatagat actgctgaag ctcttggtcg aatgtctaag gagctaaaag
      781 aattatgatt gattgggtaa ctggtaaatt ttgtataact cataaccctg aagttttacg
      841 ctctggtcag tctatccgca caaaaattgt tgatggtgta gagactatag aatacgacat
      901 agctaaccgc ttaagcgtta aaggctctca cgatgcaact atcacaataa gatcacatac
      961 agacaatacg gtcgaaatat cgggcaatcc tgcgaagttc ttgcaaggtc ataacgtgtt
     1021 cggaacaaat gatcttaaat atcttgttgc taagatgatt gataagcttt gtatgattga
     1081 tgagttggaa ttaaagccta ctgacgttga atatgaaaat atccaaagtg gtatttatca
     1141 gttgtctagg gtagacgtaa atgaacactt ctcctttcca tctgctcaag ttgctagagc
     1201 atggctacgt gctgcgggta attctgcgaa catgaaattt aggggtgctg gcttatttaa
     1261 agaaggtact ttgtatttca caccacaatc tagacgtttt gttcctaaaa tctattttaa
     1321 gtacgatgaa atcaattcta aggataaaag ccatagattg cctgacgaat tgctacagat
     1381 acccgaactt gtagaatatg ctgaaaaatc gttacgcttt gaaattaaaa tactttctac
     1441 tcaattaaag gactggatgc ttcacttagg ttgtaactgg gatgccgaca cagctacaat
     1501 gcttattaat gatcaattca ttaataaatt gcagttgagt gctaatatgg ctgttgatag
     1561 cgaagttttg cagtctctac caaagaattt gagattaacg tatacggcat gggctaacgg
     1621 tgaagattta agacaagttc tttcacgtcc tacattttat cgttatagaa ccaagctgct
     1681 tgaacatggt gtagatattt cgattgttca agataaagaa gcagatcaaa caaatgttgt
     1741 tccaatgatt agatatttag aagctgtgcc aatgggaata cctgattggg cataccagaa
     1801 aggacttgtt gcataacagg tctttttttt gctttgtagt aagcgagtga tgaatgagga
     1861 ggagctgcga cgacgagtga cagagcg
//
