LOCUS       NZ_CP114383             2343 bp    DNA     circular CON 07-APR-2024
DEFINITION  Acinetobacter baumannii strain AB6870155 plasmid pAB0155-2, complete
            sequence.
ACCESSION   NZ_CP114383
VERSION     NZ_CP114383.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN03105183
            Assembly: GCF_000794125.2
KEYWORDS    RefSeq.
SOURCE      Acinetobacter baumannii
  ORGANISM  Acinetobacter baumannii
            Bacteria; Pseudomonadota; Gammaproteobacteria; Moraxellales;
            Moraxellaceae; Acinetobacter; Acinetobacter calcoaceticus/baumannii
            complex.
REFERENCE   1  (bases 1 to 2343)
  AUTHORS   Eijkelkamp,B.A., Stroeher,U.H., Hassan,K.A., Paulsen,I.T. and
            Brown,M.H.
  TITLE     Comparative analysis of surface-exposed virulence factors of
            Acinetobacter baumannii
  JOURNAL   BMC Genomics 15 (1), 1020 (2014)
   PUBMED   25422040
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2343)
  AUTHORS   Semenec,L., Cain,A.K., Dawson,C., Liu,Q., Dinh,H., Lott,H.,
            Penesyan,A., Maharjan,R., Short,F.L., Hassan,K.A. and Paulsen,I.T.
  TITLE     Cross-protection and cross-feeding between ESKAPE pathogens
            Klebsiella pneumoniae and Acinetobacter baumannii promotes their
            co-existence
  JOURNAL   Unpublished
REFERENCE   3  (bases 1 to 2343)
  AUTHORS   Semenec,L., Hassan,K.A., Paulsen,I.T., Cain,A.K. and Dawson,C.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-DEC-2022) Natural Sciences, Macquarie University, 14
            Eastern Road, Macquarie Park, NSW 2109, Australia
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Method                   :: SPAdes v. 3.14.0
            Genome Representation             :: Full
            Expected Final Version            :: Yes
            Genome Coverage                   :: 282x
            Sequencing Technology             :: Illumina, OxfordNanopore
            ##Genome-Assembly-Data-END##
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000794125.2-RS_2024_04_07
            Annotation Date                   :: 04/07/2024 17:03:35
            Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline
            (PGAP)
            Annotation Method :: Best-placed reference protein set; GeneMarkS-2+
            Annotation Software revision      :: 6.7
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,881
            CDSs (total)                      :: 3,785
            Genes (coding)                    :: 3,721
            CDSs (with protein)               :: 3,721
            Genes (RNA)                       :: 96
            rRNAs                             :: 6, 6, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 6, 6 (5S, 16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 32 of 64
            Pseudo Genes (incomplete)         :: 33 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 13 of 64
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
            REFSEQ INFORMATION: The reference sequence is identical to
            CP114383.1.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2343
                     /organism="Acinetobacter baumannii"
                     /mol_type="genomic DNA"
                     /strain="AB6870155"
                     /isolation_source="Human sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:470"
                     /plasmid="pAB0155-2"
                     /geo_loc_name="Australia"
                     /collection_date="2002"
     gene            608..1792
                     /locus_tag="NH10_RS19405"
                     /old_locus_tag="NH10_003856"
     CDS             608..1792
                     /locus_tag="NH10_RS19405"
                     /old_locus_tag="NH10_003856"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003115284.1"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006260 - DNA replication [Evidence IEA]"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein rep"
                     /protein_id="WP_032071712.1"
                     /translation="MNIFYGENPSSASSKSLENSQSLGIKTKSHVMLTPQGFQRVHDYL
                     LQDQSRKLLPKERVSKCRRLRIDKTKTRTVMYNEHREKAHYGNVQICGSIWSCPVCAKQ
                     ITQKRRNELGKGIESWKTAHNGSVYLLTLTFSHSPDQSLKSNLEGLKRAMKRFYETTRV
                     QAIFKKLSVFHKIKGLEVTYGQNGWHPHHHVLLLAEHHDLRFKDYTSELTELWIKACIK
                     SGLNAPSMRHGLDLRNGSYADQYVSKWGLEDELSKGHVKKGRNGGFTPFDLLNFSIEDN
                     EIYGKKPSKLFQEFAISMKGARQLVWSRGLKKLLGIEEKSDEELAVETDKASITLNRVE
                     DLVFELLCRYQLRHQYLEAIKHDYETGSFGSGLADQLIEQVVNYEIKQMQQVFS"
                     /name="protein rep"
     gene            1858..2013
                     /locus_tag="NH10_RS19410"
                     /old_locus_tag="NH10_003857"
     CDS             1858..2013
                     /locus_tag="NH10_RS19410"
                     /old_locus_tag="NH10_003857"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WP_153603842.1"
                     /translation="MATEMRQKFNCDVIFNVVEAEDTTMRMDGDLTFDEMFEPQEIFSK
                     YMEPMH"
                     /name="hypothetical protein"
     Typing          603..1792
                     /name="rep_cluster_586"
                     /typing="replicon"
                     /tool="MOB-suite"
                     /identity="100.0"
                     /coverage="100.0"
                     /evalue="0.0"
ORIGIN
        1 gtgtctaccc gcgaactgac acaaaacgat ttaaaacctt ccctctctga ttacaagctc
       61 cctttagcct aagaacggga gttaccgagc tttgctcgca ggatgctttt gtttctcgaa
      121 tgagaaacgc gtaagcgtgc attcctgaaa aaacacccta atttgctagg tggaaaacac
      181 acaaagaacc tgtactaaaa ctagggagaa taaatataag aaaggagatt cacttatgct
      241 tgattatgat tttattaatt tgattctttt cgttttatcg accttgtaca caattttggg
      301 gtattacaaa aaatgatatt ccaatctatt aaaaacaagg cgggacaatt acgaggagtg
      361 aggaggaggg cacgcacgac gacacgaccg aggaattggc agagccttgt atttactgcg
      421 tgtatctctc gtatatacgg ggtgttgtca tgaaaacttg ttgtcttgct tttaggaatt
      481 tttcagtagt aatatcaact tgcactaaag tcctgtgcga aagacctagt aaaccgtaca
      541 ggcataaaaa tgggctgaca gtgctggaac acttcaaccc agtgatcaac ataattaagg
      601 tatgtcgatg aatatatttt atggggaaaa tccgtcctca gcaagctcaa agagcctcga
      661 aaatagccag tcccttggta taaagacgaa atctcatgta atgcttacgc cacaaggctt
      721 tcagcgtgtg catgattatc tattacaaga ccaatctaga aaacttcttc ctaaagaacg
      781 tgtatctaaa tgtagacgtc tccggatcga taaaactaag actagaactg ttatgtataa
      841 cgagcatcgg gagaaggctc attatggcaa tgttcaaatc tgcggttcta tttggtcatg
      901 tcctgtttgt gccaagcaaa tcacacagaa aagacgtaat gaattaggta agggcataga
      961 gtcgtggaaa acggctcata atggctctgt atatctcctt acgcttactt ttagccattc
     1021 acctgaccaa tccctcaaaa gtaatttaga gggccttaaa cgcgcaatga agcgttttta
     1081 tgagacaact cgagttcagg ctatttttaa aaaactatct gtttttcaca aaataaaagg
     1141 cctagaagtt acatacggtc agaatggttg gcatccccat catcatgtac ttcttttagc
     1201 tgaacatcat gatttacgtt ttaaagatta cacttctgaa ttaacggagt tatggattaa
     1261 agcctgtatt aaatcaggat taaatgctcc atcgatgcgc cacggtttag atcttcgaaa
     1321 tggctcttat gctgaccaat atgtgtctaa gtggggcctt gaagatgaac tttcgaaagg
     1381 gcatgtgaaa aaaggtcgca atggtggttt tacccctttt gatcttttaa atttttctat
     1441 tgaagataat gaaatttatg gaaaaaaacc ttctaaactt tttcaagaat ttgccatttc
     1501 tatgaagggt gctcgccaac tagtttggtc tcgaggtctt aaaaaacttt taggtattga
     1561 agaaaaaagt gacgaggaac ttgcagtaga aactgacaaa gcttccatta ctttgaatcg
     1621 tgttgaagat ctcgtttttg aacttttatg tcgttatcaa ttgcgtcatc aatatcttga
     1681 agcaattaaa catgattatg agactggctc ttttggttct ggattagcag atcaacttat
     1741 tgagcaagta gtgaattatg aaattaaaca aatgcagcag gtattttcgt gattgaagca
     1801 atttatattt ccataggtaa gattcatcga aatgtaccta aactaatttg ggataacatg
     1861 gccacagaaa tgcgtcaaaa atttaattgt gacgtgattt tcaatgttgt tgaagctgaa
     1921 gatacgacta tgcgtatgga tggtgattta acttttgatg aaatgtttga acctcaagaa
     1981 atatttagta agtacatgga accaatgcat taattattaa atcacttaat ggcgtttggc
     2041 gtgcgatgca cgcacataac gccattaagt gagttcttat tagcctggaa tattccaggc
     2101 ttttttgcgt gtacgcaaaa atcaaaaaga accaaattga caacatgaca acaagacaat
     2161 ttgacaacat gaaaacatga caacaactta ggctatctat gcaccactgg tgcatgaata
     2221 tttgggcgca atatcagcgt ggcgggggtc ggtgggatgt gcggagcgcg tcctgccgac
     2281 ccccgcgatg ctgatatgag agcagatatt tattttcagc ctgaaaatga aaaaacagag
     2341 cgg
//
