LOCUS       NZ_CP110639             5251 bp    DNA     circular CON 03-JAN-2024
DEFINITION  Klebsiella pneumoniae strain K201054 plasmid pB, complete sequence.
ACCESSION   NZ_CP110639
VERSION     NZ_CP110639.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN31311655
            Assembly: GCF_026153495.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Klebsiella/Raoultella group; Klebsiella.
REFERENCE   1  (bases 1 to 5251)
  AUTHORS   zhou,y.
  TITLE     Insight into the conal isolates of ST412 Klebsiella pneumoniae
            within a single patient in a short term with non-hypermucoviscosity
            and hypermucoviscosity
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5251)
  AUTHORS   zhou,y.
  TITLE     Direct Submission
  JOURNAL   Submitted (06-NOV-2022) School of Basic Medicine, Southwest Medical
            University, xiangling street, Luzhou, Sichuan 430200, China
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Method                   :: SOAPdenovo v. version 2.04
            Genome Representation             :: Full
            Expected Final Version            :: No
            Genome Coverage                   :: 100.0x
            Sequencing Technology             :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Date                   :: 01/03/2024 08:08:15
            Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline
            (PGAP)
            Annotation Method :: Best-placed reference protein set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,523
            CDSs (total)                      :: 5,395
            Genes (coding)                    :: 5,267
            CDSs (with protein)               :: 5,267
            Genes (RNA)                       :: 128
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 87
            ncRNAs                            :: 16
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 59 of 128
            Pseudo Genes (incomplete)         :: 65 of 128
            Pseudo Genes (internal stop)      :: 34 of 128
            Pseudo Genes (multiple problems)  :: 28 of 128
            ##Genome-Annotation-Data-END##
            REFSEQ INFORMATION: The reference sequence is identical to
            CP110639.1.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..5251
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="K201054"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /plasmid="pB"
                     /geo_loc_name="China: Zhejiang"
                     /lat_lon="31.6 N 120.3 E"
                     /collection_date="2020-04-25"
                     /collected_by="Affiliated Wuxi No.2 Peoples Hospital"
     gene            230..715
                     /locus_tag="OO068_RS27545"
     CDS             230..715
                     /locus_tag="OO068_RS27545"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="MbeB family mobilization protein"
                     /protein_id="WP_013631087.1"
                     /translation="MSSLLALAKDLEQQSKAQQQSTGEMLKAAFSEHEQSVKAELSASA
                     KRISDAISAHEQGMTAAMQSNRLSVLRMVGRTWLTITLVSVLLIATSGSILWWQGQQIT
                     GNYQTIRAQERTQAMLSEKNHGVQLSLCGEKKLSCVKVNPKAGAYGEEGNWMVLERK"
                     /name="MbeB family mobilization protein"
     gene            719..931
                     /locus_tag="OO068_RS27550"
     CDS             719..931
                     /locus_tag="OO068_RS27550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000137423.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MbeD family mobilization/exclusion protein"
                     /protein_id="WP_000137423.1"
                     /translation="MTELEKQLLTALEQLHQDYSQRLDEWESAFAEWQKMSGLMQRENA
                     ALNERVTRLSQQVANLSRQLQRLSQ"
                     /name="MbeD family mobilization/exclusion protein"
     gene            1564..2919
                     /locus_tag="OO068_RS27555"
     CDS             1564..2919
                     /locus_tag="OO068_RS27555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000498067.1"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA];
                     GO:0016887 - ATP hydrolysis activity [Evidence IEA]"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="WP_014386473.1"
                     /translation="MFVYLTIENFRSVKEKSTLNLSASGSSNHLTTHIYKNDGMNVGTL
                     MSAGIYGANASGKSNVLMAFEAIKFIATESGDLKEGKRIPCYEPYALSSATNEAPVKFE
                     AEFYSVEGNRFSYEVAFIKNRILFESLDYYPSRVKANLFTRDESDTWETIKFGGHYKGG
                     IKKIPFFPNNSYLAKAGNNAASPDIIKEAYNFFRKGIRHIGLNEKIRISSFGEREDVVN
                     ETAKVLCMVDTGVSGISVREVEAEIPIKMDEEIPQEIKEIIEEDYKYRYMFSHPTDEGG
                     SVSFPMGRESEGTQKLFEIIPLIRSAFNDSMVVIVDELDNSLHPHIADLIVKLFNDPDV
                     NKKGSQLVFSTHNMQLMAPEKMRRDQIWFCEKNKGASSLYSLDDFDKKKIKTTTPYAAW
                     YDEGRFGGVPDINYLKVASFISGDISLVMPDIDVKELSDGFFEEFDGDLSDE"
                     /name="ATP-binding protein"
     gene            2912..3532
                     /locus_tag="OO068_RS27560"
     CDS             2912..3532
                     /locus_tag="OO068_RS27560"
                     /inference="COORDINATES: protein motif:HMM:NF025084.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RloB family protein"
                     /protein_id="WP_023312615.1"
                     /translation="MSKKHGNNKKVPQVMYIYCEGEKTEPLYLEAYISDRSKRTLSVFK
                     IPKTRKNTPEQLVDEAIKKKNSSSSAEGDVFWVVYDQEHLTPSSISCHQKAWNKANRHG
                     INIAISCVCFELWLLLHFGFTTKDFSSYDNLMSSSPLKKLITNYDKGSKLTYLAIRERI
                     GTAKDNARKLDIYAKTNYKNTHEPYLFPCYTSFHELLKAIDDF"
                     /name="RloB family protein"
     gene            complement(3685..3846)
                     /locus_tag="OO068_RS27565"
     CDS             complement(3685..3846)
                     /locus_tag="OO068_RS27565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001326446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WP_023144844.1"
                     /translation="MHEPPVQSDRCAFSGNYHLESNPERHGSSPLAAAIGNGLEEVSLE
                     VLRQLRLN"
                     /name="hypothetical protein"
     gene            4483..4803
                     /locus_tag="OO068_RS27570"
     CDS             4483..4803
                     /locus_tag="OO068_RS27570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000957083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MobC family plasmid mobilization relaxosome
                     protein"
                     /protein_id="WP_014386475.1"
                     /translation="MLTMWVTEDEHRRLLERCDGKQLAAWMRQTCLDEKPARAGRLPSI
                     SPALLRQLAGMGNNLNQIARKVNAGGAGHDRVQIVAALMAIDAGLERLRHAVLEKGGDD
                     DR"
                     /name="MobC family plasmid mobilization relaxosome protein"
     Typing          4197..4369
                     /name="MOBP"
                     /typing="oriT"
                     /tool="MOB-suite"
                     /identity="84.659"
                     /coverage="100.0"
                     /evalue="9.74e-41"
     Typing          complement(3734..4250)
                     /name="ColRNAI_rep_cluster_1987"
                     /typing="replicon"
                     /tool="MOB-suite"
                     /identity="93.462"
                     /coverage="99.0"
                     /evalue="0.0"
     Typing          2..309
                     /name="MOBP"
                     /typing="relaxase"
                     /tool="MOB-suite"
                     /identity="88.35"
                     /coverage="95.0"
                     /evalue="5.790000000000001e-47"
     Typing          4794..5251
                     /name="MOBP"
                     /typing="relaxase"
                     /tool="MOB-suite"
                     /identity="95.425"
                     /coverage="100.0"
                     /evalue="1.51e-91"
ORIGIN
        1 cgacggttac tggtcacgcc gtccgcactg ccggaaacga agctggaagc cgctcaggcg
       61 attacacgtg ggttgctggc cttagcctca tccggggagc tcaaaacgcg cgaggacgtc
      121 acaggggcgc tcacagcggc aggttttgag gtggtccgca ccacaaaaaa cagtatcagc
      181 attgccgacc cggacggggg gcgaaacatc cgactgaagg gagccattta tgagcagtct
      241 tttagcgctg gcgaaggact tggagcagca atcgaaagcg cagcagcaga gtaccggcga
      301 gatgctgaaa gccgcattca gcgagcacga gcagtctgta aaagcggaac tgagcgcaag
      361 cgcgaagaga atcagcgacg ccatcagcgc ccacgagcag ggtatgaccg cggcgatgca
      421 gtcgaaccgg ctgagcgtgc tgcgtatggt cggccggacg tggctgacca tcaccctggt
      481 ctcggtactg ctgatcgcca cgagcgggag cattctgtgg tggcaggggc agcagatcac
      541 cgggaattac cagactatcc gggcgcagga gcggacgcag gccatgctgt cggagaagaa
      601 ccacggcgtg cagctgtcgc tctgcgggga gaagaaactg tcctgcgtca aagtgaaccc
      661 gaaagcggga gcttacgggg aggaagggaa ctggatggta ctggagagga aatagcccat
      721 gacggaactg gaaaaacagt tgctgaccgc attagagcag ctacatcagg actactcgca
      781 aaggctggac gagtgggaga gcgccttcgc ggaatggcag aagatgtctg gtcttatgca
      841 acgggagaac gcggcgctga acgagcgcgt cacgcgcttg agtcagcagg tggcgaactt
      901 gagcaggcag ttacagcgtt tgagccagta gtgcagcggc atgaaatggc ggtggccgcc
      961 gaacgggcat acgagcagaa acagcatgaa aaagagctgg cggaaacccg ttcccggcag
     1021 cggagctatg acggtccgac gctgggctga ctgcgcgcat ccagtgacaa accccaagaa
     1081 gaagggctca taaatttccc gctaaatacg gtcgtgatgt ttccatcaca gcgtatacaa
     1141 cggagggatt atgagactgt ttaacgtgat tgagacggtg ctgaattgcc tgtacatggc
     1201 gctggagatc tgggactggc tggagaagca ttttcctgtt tttaaggcgt tcatccggat
     1261 tctggcctga aatcagaccg tatgcatctg gctgcatgac catgcagccg ggtaaaattt
     1321 atctgtcacg aacggggcgg tgtatcgggt ggtttgttgc cggttttacc tgactgccgc
     1381 cccgtttgtg gcgaacctgt ccggagcggt gcgggcaaca gatgttatgg taaatagcgt
     1441 gtaattataa atagcacaac gttttttaag gaagatgttg ttccaaaatt aaaacatata
     1501 ggatatcttt cctatgattg atttttcgct tttttggcga aaaatccccg ttaggaggta
     1561 tgcatgtttg tttatttgac tattgaaaat tttaggtcgg ttaaggaaaa atcgacatta
     1621 aacttgagcg catccggttc tagtaaccat ttaacaactc atatctataa aaatgatgga
     1681 atgaatgttg gaacgctcat gagtgctggg atttatggtg ctaatgcgtc tggtaaatct
     1741 aacgttctca tggcttttga agctataaaa tttatcgcaa cagaaagcgg tgatttgaaa
     1801 gaaggtaaac ggattccctg ctatgagcca tatgctcttt cttcggctac gaatgaggct
     1861 cctgtaaagt ttgaggctga attttattct gttgagggga atcggttcag ttatgaagtt
     1921 gcttttatta aaaatcggat tttatttgaa tcattagact attatccatc tagggttaaa
     1981 gcaaatttat ttactagaga tgagagcgac acctgggaaa caatcaagtt tggtgggcat
     2041 tataaaggag gtattaaaaa aataccattc ttccctaata attcatactt agcgaaagca
     2101 ggtaataatg ccgcatcacc agacataatt aaagaagctt ataacttttt tagaaaggga
     2161 attagacata taggtttaaa tgaaaagata agaatatctt cttttgggga gagggaggac
     2221 gtcgtaaatg aaacggccaa ggttttatgc atggttgaca ctggtgtttc cggtatatct
     2281 gtacgggagg ttgaggcgga aataccaata aaaatggatg aggaaatccc tcaagaaata
     2341 aaggagataa ttgaagaaga ttataaatat cgttatatgt tctctcatcc tactgatgaa
     2401 ggggggagtg tttctttccc tatggggaga gagtctgaag gcacccaaaa attatttgaa
     2461 atcatacctc taattagatc tgcgtttaat gatagtatgg ttgtaattgt tgatgagtta
     2521 gataatagct tgcacccgca tattgctgac ttgattgtta agttatttaa tgatcctgat
     2581 gtcaataaaa aaggctcaca acttgtattc tcaacccata atatgcagtt aatggctcca
     2641 gagaaaatga gaagagatca gatatggttt tgtgaaaaaa ataaaggtgc gtcgtctctt
     2701 tatagcttag atgattttga taagaaaaag ataaaaacaa caacacctta cgcagcttgg
     2761 tatgatgagg gtaggtttgg tggggttccc gacataaact acttaaaggt agcctcattt
     2821 atatctggtg atatatcctt ggtaatgccg gatattgacg tcaaagaatt gtctgatggt
     2881 ttttttgaag agtttgacgg ggatctttct gatgagtaaa aaacatggaa ataataagaa
     2941 agtcccacaa gtaatgtata tatactgtga gggtgagaaa accgaaccat tataccttga
     3001 ggcttatatt tcagacagat ctaaaagaac tttaagtgta tttaaaatac ctaaaacaag
     3061 aaaaaataca cctgagcagt tggtggatga ggcgataaag aaaaagaatt catcatcttc
     3121 cgcagaaggt gacgtctttt gggttgttta tgatcaagag catctgacgc cttcgtctat
     3181 ttcatgtcat caaaaggcat ggaataaagc taataggcat gggataaata tagcaatatc
     3241 ctgtgtttgt tttgaattat ggttattgtt gcatttcggc ttcacaacca aagatttttc
     3301 gtcgtatgat aatttgatgt ctagctcccc gctaaaaaaa ttaataacta actatgataa
     3361 aggtagtaaa ctaacttacc ttgctataag agagaggatt ggtactgcga aagataacgc
     3421 aagaaagcta gatatttacg ctaaaactaa ttataaaaac acgcacgaac cttatctatt
     3481 tccatgttat acatcattcc atgagctact taaggcgatt gacgactttt gaagtaatcc
     3541 attgaccatg gcttattaca ggctgtaatc tatgaaaaat aaaaaccacc gctaccaacg
     3601 gtggtttttg gaaggtacat gagctaccaa cttatgtacc gggtaactgg cttagaggga
     3661 gcgcagtcac caaaaattgt cctttcagtt tagccttaac tggcgcagaa cttcaagact
     3721 cacttcctct aatccgttac caatggctgc tgccagtggc gatgaaccgt gtctttccgg
     3781 gttggactca agatgatagt taccggagaa ggcgcagcgg tcggactgaa cggggggttc
     3841 gtgcatacag tccagcttgg agcgaactgc ctacccggaa ctgagtgtca ggcgtggaat
     3901 gagacaaacg cggccataac agcggaatga caccggtaaa ccgaaaggca ggaacaggag
     3961 agcgcacgag ggagccacca gggggaaacg cctggtatct ttatagtcct gtcgggtttc
     4021 gccaccactg atttgagcgt cagatttcgt gatgcttgtc aggggggcgg agcctatgga
     4081 aaaacggcag cggcgcatcc tttttctgcc ccgtttgtca tgccatatgc cttcgctctt
     4141 ctccgtgtgc aggtaacgcc cgccgcagcc gaacggcagg agcggcagcg actgagtgag
     4201 cgaggaggcg tcatatcctc tgaacttcca ttttctgcct tacgcccgca gctgcatttt
     4261 cctctgtcac atgaagcact ttcctgatta ccgcactcat gccaacataa taagccagta
     4321 tacactccgc tagcgctacg tgactggttc agggctgcgc cccgaaaccc gctaaaagcg
     4381 actgacgcgc ctgcggcttg tccaacaccg tgccgaccgg gaaacatttc ccgcccgtcc
     4441 cggtgttatc aggaggctac tctggcagac aaacgcaaca agatgctcac gatgtgggtg
     4501 acggaagacg aacaccggcg gctgctcgag cggtgcgacg gcaagcagct ggcggcgtgg
     4561 atgcgtcaga cctgcctcga tgagaagccg gcgcgtgccg gcagactgcc gtcgatatcg
     4621 ccggcgctgc tgcgccagct tgccggtatg gggaacaacc tgaaccagat cgcccggaaa
     4681 gtgaatgccg gtggtgccgg tcatgaccgg gtgcagattg tggccgcact gatggcaatc
     4741 gacgcgggac tggagcggct gcggcatgcg gtgctggaaa aaggggggga tgatgatcgt
     4801 taaatttcac ccccgggggc gcggtggtgg tgccggtccg gtggattacc tgctgggaaa
     4861 agaccggcag cgcgaggggg cgaccgtgct gcagggaaaa ccggaggaag tccgggagct
     4921 tatcgatgcc tcgccgtatg cgaaaaagta cacctccggc gtgctgtcgt tcgcggaggc
     4981 tgaactgccg cccgggcagc gggagcagat catggccagc tttgagcggg ttctgatgcc
     5041 cgggctcgat aaagaccagt acagcattct gtgggtggag cacaccgaca aggggcggct
     5101 ggagctgaat ttcctgatcc ccaacactga actgctgacc gggaaacgcc tgcagccgta
     5161 ctacgatcgc gccgaccggc cgcgcatcga tgcctggcag accgtggtga acggcaggct
     5221 ggggctgcat gatccaaacg ccccggagaa c
//
