LOCUS       NZ_CP103344             2278 bp    DNA     circular CON 02-OCT-2023
DEFINITION  Acinetobacter baumannii strain AB105 plasmid unnamed7, complete
            sequence.
ACCESSION   NZ_CP103344
VERSION     NZ_CP103344.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN30068511
            Assembly: GCF_025264005.1
KEYWORDS    RefSeq.
SOURCE      Acinetobacter baumannii
  ORGANISM  Acinetobacter baumannii
            Bacteria; Pseudomonadota; Gammaproteobacteria; Moraxellales;
            Moraxellaceae; Acinetobacter; Acinetobacter calcoaceticus/baumannii
            complex.
REFERENCE   1  (bases 1 to 2278)
  AUTHORS   Guo,T., Yang,L. and Li,G.
  TITLE     Whole genome sequence of AB105 and the relationship with MGEs
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2278)
  AUTHORS   Li,G.
  TITLE     Direct Submission
  JOURNAL   Submitted (22-AUG-2022) School of Medicine, Yangzhou University, 88
            Daxue South Road, Yangzhou 225009, China
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Method                   :: Unicycler v. v0.4.8
            Genome Representation             :: Full
            Expected Final Version            :: Yes
            Genome Coverage                   :: 100.0x
            Sequencing Technology :: Illumina HiSeq; Oxford Nanopore MinION
            ##Genome-Assembly-Data-END##
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Date                   :: 10/02/2023 04:16:26
            Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline
            (PGAP)
            Annotation Method :: Best-placed reference protein set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,674
            CDSs (total)                      :: 3,579
            Genes (coding)                    :: 3,414
            CDSs (with protein)               :: 3,414
            Genes (RNA)                       :: 95
            rRNAs                             :: 6, 6, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 6, 6 (5S, 16S, 23S)
            tRNAs                             :: 73
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 165
            CDSs (without protein)            :: 165
            Pseudo Genes (ambiguous residues) :: 0 of 165
            Pseudo Genes (frameshifted)       :: 65 of 165
            Pseudo Genes (incomplete)         :: 85 of 165
            Pseudo Genes (internal stop)      :: 40 of 165
            Pseudo Genes (multiple problems)  :: 20 of 165
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
            REFSEQ INFORMATION: The reference sequence is identical to
            CP103344.1.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2278
                     /organism="Acinetobacter baumannii"
                     /mol_type="genomic DNA"
                     /strain="AB105"
                     /host="Homo sapiens"
                     /db_xref="taxon:470"
                     /plasmid="unnamed7"
                     /geo_loc_name="China:Jiangsu"
                     /collection_date="2022-04-20"
     gene            complement(776..1708)
                     /gene="repM"
                     /locus_tag="NT399_RS18350"
                     /old_locus_tag="NT399_18350"
     CDS             complement(776..1708)
                     /gene="repM"
                     /locus_tag="NT399_RS18350"
                     /old_locus_tag="NT399_18350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005265321.1"
                     /GO_function="GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA]"
                     /GO_process="GO:0006270 - DNA replication initiation
                     [Evidence IEA]"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication initiation protein RepM"
                     /protein_id="WP_000711927.1"
                     /translation="MKKELVVKDNALINASYNLDLSEQRLILLAILEARQSNTPNDKDL
                     TIHAESYINHFNVHRNTAYKVLKDACKSLFDRRFSYQKLTQKGNIENVISRWVQRISYV
                     ENEALVRIKFSDDVVPLITNLEKHFTSYELEQVSSLTSVYAIRLYELLIAWRSTGKVTM
                     VELEELRLKLGIEPNEYKRMGQFKEKVLHLAIDQINKYTDIKAEYEQHKRGRSIIGFSF
                     KFKQKQQPKKLDSKRDPNTPDFFIRMTDAQRHLFGNKLAHDARVQSEYSHLIGTGSYED
                     FAKLLADMLAEEQHFKMFYPLLVEHGYKA"
                     /name="repM"
     Typing          complement(777..1348)
                     /name="rep_cluster_1280"
                     /typing="replicon"
                     /tool="MOB-suite"
                     /identity="100.0"
                     /coverage="100.0"
                     /evalue="0.0"
ORIGIN
        1 aaaaggcaca gacacttcgc ttcgctgcgc ctaaaaacaa ttaccgtaca agctcgcttc
       61 gctcgtcctt cctggacgtc aggattcctt gtactttaag ggctggacgc ccttaataat
      121 cgttttttgt tgcctttcac tttccgctat cgctccaagt tgcagcgcac ttcgtgctcg
      181 cgccccgtca tcctcctacg gagttgaccc accccctttt aggtgcatat ttcgcttagg
      241 ctcgtatgtc cttcggattc gctgaacgct tacactaaaa cgaggtgggt caactcccct
      301 tcgggatagt ttgacggggt gggcttgccc cccaacaact aacgacatct ggggatgtct
      361 aaagttcgtg tccactccct tttacgttgt cggctccccc cagtcatctc cgctggggct
      421 tcgatgatgt tccgctttcg cttcacaccc cttcggggct ttctttggct aaagccaaaa
      481 tgaaaagcac agatagattt ttagagcgag tgtctacgag tgaactgatg aaatgcaaaa
      541 acaagacaca ccctccctga ttacatgctc tatttgctca taggatgcga tatttcgagc
      601 tttgctcgca gtgggtatgt gaatgtagct tgttggattt ggatcgctta aaacgcaatt
      661 tagaggggtt ggtggctatc caccaatatt ggcgtattgg tggcgccacc ttatcttgta
      721 catagataag gaaggtcgaa atgacttatc taccattgat agaatacgac aagatttatg
      781 ctttgtaacc atgctctaca agcaaagggt aaaacatctt aaaatgctgt tcttctgcaa
      841 gcatatccgc cagtaatttt gcaaagtctt catagcttcc agtaccaatt aaatggctgt
      901 attcgctttg tacacgagca tcatgggcta gtttgttccc aaataagtgg cgttgtgcat
      961 cggtcattct gataaaaaag tcaggtgtgt ttgggtcacg cttagaatct aattttttcg
     1021 gttgttgttt ctgcttaaac ttaaatgaaa aaccaataat tgaacgacca cgtttgtgtt
     1081 gttcatactc tgcttttata tctgtgtact tattaatttg atcaatggca aggtgtaaaa
     1141 ctttttcttt aaattgcccc attctcttgt attcattggg ttctatgcct agttttaatc
     1201 ttagctcttc tagctctacc atagtcactt tgcccgtact acgccatgcg ataagcaact
     1261 catacaagcg tatagcgtaa acactagtta aactgctgac ttgctctagt tcataactag
     1321 tgaagtgttt ttctaaattt gtaatcaacg gtacaacatc atcagaaaac ttaatacgaa
     1381 caagagcttc attctctaca taagatattc gttgtaccca tcgacttatt acattctcaa
     1441 tgttgccctt ttgagtcagt ttttgatagc taaatctacg atcaaatagg cttttgcaag
     1501 catctttaag aactttatag gctgtatttc tatgaacatt gaaatggttg atatagcttt
     1561 cagcatgaat cgtcaaatct ttatcattgg gtgtatttga ttgcctagct tcaagtatgg
     1621 ctaacagtat taaacgttgt tctgataggt ctaaattata actggcattt attagtgcat
     1681 tatctttaac gactagttct tttttcataa gcacacatgt cttttaagta tataagtaca
     1741 ctctatttta ttaagtgtca ctttgcaaga taaaggtgta cttattgcaa gataaaggtg
     1801 tacttattgc aagataaagg tgtacttatt gcaagataaa ggtgtactta tccttatttt
     1861 tattattatt tatcaattaa ttacagaggc taaaaattaa aaaattaaaa attattaaaa
     1921 aaaggggagt gcttaaaact gccctatgta ctcgctaaag ctcgtactct attgaagctc
     1981 gttcctcgct tcgtggggca gtttttagtt aatcctgttt gtgaaatcta aaagcaaaag
     2041 catttgtaat gtattcgctt cgctcatact ttttgaaaag caaaagctcc aaagttcgca
     2101 cccattcggg atgctctgta cctaccgttt aaaatcgaaa gggagcttgt aatcagagaa
     2161 aaggcgaggg cgaaattttg atgatgctca atcgctcgta gacactcgct cggttaattc
     2221 tatctgtgct ttctatggtg cttttattgg atttttagtg caccgataaa agcacagt
//
