LOCUS       NZ_CP103343             2368 bp    DNA     circular CON 02-OCT-2023
DEFINITION  Acinetobacter baumannii strain AB105 plasmid unnamed6, complete
            sequence.
ACCESSION   NZ_CP103343
VERSION     NZ_CP103343.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN30068511
            Assembly: GCF_025264005.1
KEYWORDS    RefSeq.
SOURCE      Acinetobacter baumannii
  ORGANISM  Acinetobacter baumannii
            Bacteria; Pseudomonadota; Gammaproteobacteria; Moraxellales;
            Moraxellaceae; Acinetobacter; Acinetobacter calcoaceticus/baumannii
            complex.
REFERENCE   1  (bases 1 to 2368)
  AUTHORS   Guo,T., Yang,L. and Li,G.
  TITLE     Whole genome sequence of AB105 and the relationship with MGEs
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2368)
  AUTHORS   Li,G.
  TITLE     Direct Submission
  JOURNAL   Submitted (22-AUG-2022) School of Medicine, Yangzhou University, 88
            Daxue South Road, Yangzhou 225009, China
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Method                   :: Unicycler v. v0.4.8
            Genome Representation             :: Full
            Expected Final Version            :: Yes
            Genome Coverage                   :: 100.0x
            Sequencing Technology :: Illumina HiSeq; Oxford Nanopore MinION
            ##Genome-Assembly-Data-END##
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Date                   :: 10/02/2023 04:16:26
            Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline
            (PGAP)
            Annotation Method :: Best-placed reference protein set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,674
            CDSs (total)                      :: 3,579
            Genes (coding)                    :: 3,414
            CDSs (with protein)               :: 3,414
            Genes (RNA)                       :: 95
            rRNAs                             :: 6, 6, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 6, 6 (5S, 16S, 23S)
            tRNAs                             :: 73
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 165
            CDSs (without protein)            :: 165
            Pseudo Genes (ambiguous residues) :: 0 of 165
            Pseudo Genes (frameshifted)       :: 65 of 165
            Pseudo Genes (incomplete)         :: 85 of 165
            Pseudo Genes (internal stop)      :: 40 of 165
            Pseudo Genes (multiple problems)  :: 20 of 165
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
            REFSEQ INFORMATION: The reference sequence is identical to
            CP103343.1.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2368
                     /organism="Acinetobacter baumannii"
                     /mol_type="genomic DNA"
                     /strain="AB105"
                     /host="Homo sapiens"
                     /db_xref="taxon:470"
                     /plasmid="unnamed6"
                     /geo_loc_name="China:Jiangsu"
                     /collection_date="2022-04-20"
     gene            join(1691..2368,1..609)
                     /locus_tag="NT399_RS18335"
                     /old_locus_tag="NT399_18335"
     CDS             join(1691..2368,1..609)
                     /locus_tag="NT399_RS18335"
                     /old_locus_tag="NT399_18335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003115284.1"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006260 - DNA replication [Evidence IEA]"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein rep"
                     /protein_id="WP_162541517.1"
                     /translation="MSLFYGAFNPYSSNISLISFKNCQNGKSSLHARASAAGRTAVRTC
                     GEGARGRLGIFTKSHSIIENKGFQRVHEFLLQDQSARLLPKERVCNCLKKRIDSSKEFS
                     VKYNEVRNKAHWANVQRCGSVWTCPVCAKQITEKRRDELKRACDAWKNQGGEVFLLTLT
                     NSHSANHALKSLISGQKKALRLFFGGRKAVELFTKLGRKYQIRSFEVTYGQNGWHPHFH
                     ILLFLDGSFDRSFNIRDDLAKHWINCCIKSGLPAPSMEHGLDLRDGKYADRYVSKWGIE
                     HELTKGHIKKGRNGGFTPFDLLQLSIDDEIVYGRSTSRLYQEFAISFKGARQLVWSRGL
                     KAYLGIDEKSDEELAEETELNAIELRTVDSFIFSLLCKYQKRHEFLKTLERDYENGCFG
                     SGETEQMLVDLIEREIRFLEKGGTVFSSV"
                     /name="protein rep"
     gene            704..943
                     /locus_tag="NT399_RS18340"
                     /old_locus_tag="NT399_18340"
     CDS             704..943
                     /locus_tag="NT399_RS18340"
                     /old_locus_tag="NT399_18340"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WP_005130291.1"
                     /translation="MIVVTIGKNAFPGSVQDQGKYLDNFRSDFKAEFGYPIMYDEDAKL
                     EGIKIGFRFKGANGVPLKMVDKILNKIKSAFNVQ"
                     /name="hypothetical protein"
     gene            1019..1219
                     /locus_tag="NT399_RS18345"
                     /old_locus_tag="NT399_18345"
     CDS             1019..1219
                     /locus_tag="NT399_RS18345"
                     /old_locus_tag="NT399_18345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000752628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WP_032008538.1"
                     /translation="MTAANTTVLELLGKQVSFTYVTEWAELPKKGTVTSVVLSLNSEPE
                     ILIDDGDFISMSEIRDFKLVE"
                     /name="hypothetical protein"
ORIGIN
        1 ttggatggtt cttttgaccg ttcttttaat atccgtgatg atttagctaa gcattggatt
       61 aattgttgta ttaaatcagg cttacctgct ccaagtatgg aacatggttt ggacttgcgt
      121 gatggtaagt atgccgatcg gtacgtatct aaatggggta tcgagcacga acttacaaag
      181 ggtcatatta aaaagggccg taatggtgga tttacccctt ttgatcttct tcagttatcc
      241 atcgatgatg aaattgtata tgggaggtca accagtcgtt tatatcaaga attcgctatt
      301 agttttaaag gtgcacgtca attggtgtgg tccagaggtt taaaagcgta tttaggtatc
      361 gatgaaaaat ccgatgaaga actggcagaa gaaaccgagc ttaatgctat tgaactgcga
      421 acagtggatt ctttcatatt cagcctttta tgtaagtacc aaaagcgcca cgaattttta
      481 aagacactag aaagggacta tgaaaacggg tgttttggct caggtgaaac tgagcaaatg
      541 ctggttgatc ttattgaacg agaaattcgg tttttagaaa aagggggtac tgttttttct
      601 tccgtctaat taaaggggag cgctgagcga cctagggaga aaaatgatct acccaactgt
      661 agttttttct aaatccggtt agttgttaat aggattgatt gaaatgatag ttgtgactat
      721 aggtaaaaat gctttccctg gcagtgttca agaccagggc aaatatttag ataattttag
      781 atctgatttt aaagctgagt ttggttatcc gattatgtat gacgaggatg ccaagctaga
      841 aggtattaaa attggttttc gatttaaagg tgctaatgga gtgcctttga agatggttga
      901 taagattttg aataagatca aatcagcttt taacgtgcaa taatgcacaa agtcgtcagg
      961 tgtaagaacg gcaattcaga cacctgacta atcacaatga tctatatcgg agatcactat
     1021 gactgctgca aatactactg ttttggaact tttaggcaaa caagtttctt tcacatacgt
     1081 tactgaatgg gctgaattgc ctaaaaaagg tacggtaacg tctgttgttc ttagcttgaa
     1141 ttccgaacct gagattctta ttgatgatgg cgactttatt tcgatgtctg agattaggga
     1201 ttttaagttg gttgaatgat tcaggtgctc tcttcggagg gcattttttt tgcctgtttg
     1261 attgctagca tttagacggc ttttgcctat cctgcgctat accttttcaa taaaaatcac
     1321 cctttgtttt tgctgaagta gttttataaa aaactggaat tttttataaa accttcagct
     1381 ctgtacctga ccaataaata aaagttccag agctcatgtc tatgagcgaa ctgatgaaat
     1441 ttaattaaaa accttccctc tctgattaca gctcccttta gcctaagaac gggattaacc
     1501 gagctacgct cgcagatatc ttttgtattt gattctttta agaaaaggtg tatattttca
     1561 cttaattacc gtccgtagca ataaataatc ccactgaggt tggaagtggt taactaaaat
     1621 tcggacaaaa atatgcccca gcagtgctac caacactcta gggcgtgatg aacataaagc
     1681 gagtatgtcc atgagcctat tttatggggc atttaacccc tattcaagca atatcagtct
     1741 aatttcgttc aaaaattgcc aaaatggtaa atcttctttg cacgcgcgcg ctagcgctgc
     1801 ggggcgcacg gccgtacgta cctgcggcga gggcgctcgc ggtcgccttg gtatatttac
     1861 gaaatctcat tccatcattg aaaataaagg ctttcagagg gttcatgagt tccttcttca
     1921 agatcaatct gcaagacttt tgcctaaaga gcgtgtttgt aattgtttga agaagcgaat
     1981 cgattcttca aaagaatttt ctgtcaaata taacgaagtt agaaataagg ctcattgggc
     2041 caatgtgcag cgctgtggct ctgtttggac ttgccctgtc tgtgcaaagc agattactga
     2101 aaaacgtcgt gatgagctta agagagcctg tgacgcatgg aaaaaccaag ggggtgaggt
     2161 ttttctttta acccttacaa atagccattc tgcgaatcat gctttgaagt ctttaatttc
     2221 ggggcagaaa aaagcgctta ggcttttttt tggtggtcgc aaagctgttg aactttttac
     2281 gaaattgggt cgcaagtacc agattcgttc ttttgaagtt acttatggcc agaatggttg
     2341 gcatcctcat ttccatattt tgttgttt
//
