LOCUS       NZ_CP096325             2431 bp    DNA     circular CON 16-NOV-2023
DEFINITION  Providencia sp. PROV103 plasmid pPROV103-2, complete sequence.
ACCESSION   NZ_CP096325
VERSION     NZ_CP096325.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN27652387
            Assembly: GCF_033682525.1
KEYWORDS    RefSeq.
SOURCE      Providencia sp. PROV103
  ORGANISM  Providencia sp. PROV103
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Morganellaceae; Providencia.
REFERENCE   1  (bases 1 to 2431)
  AUTHORS   Zhou,D. and Wang,P.
  TITLE     Providencia isolates in China
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2431)
  AUTHORS   Zhou,D. and Wang,P.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-APR-2022) State Key Laboratory of Pathogen and
            Biosecurity, Beijing Institute of Microbiology and Epidemiology,
            No.20, Dongdajie, Fengtai, Beijing 100071, China
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Method                   :: SOAPdenovo v. 1
            Genome Representation             :: Full
            Expected Final Version            :: No
            Genome Coverage                   :: 100x
            Sequencing Technology             :: PacBio Sequel
            ##Genome-Assembly-Data-END##
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Date                   :: 11/16/2023 04:17:52
            Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline
            (PGAP)
            Annotation Method :: Best-placed reference protein set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,473
            CDSs (total)                      :: 4,369
            Genes (coding)                    :: 4,271
            CDSs (with protein)               :: 4,271
            Genes (RNA)                       :: 104
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 78
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 98
            CDSs (without protein)            :: 98
            Pseudo Genes (ambiguous residues) :: 0 of 98
            Pseudo Genes (frameshifted)       :: 35 of 98
            Pseudo Genes (incomplete)         :: 68 of 98
            Pseudo Genes (internal stop)      :: 23 of 98
            Pseudo Genes (multiple problems)  :: 20 of 98
            ##Genome-Annotation-Data-END##
            REFSEQ INFORMATION: The reference sequence is identical to
            CP096325.1.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2431
                     /organism="Providencia sp. PROV103"
                     /mol_type="genomic DNA"
                     /strain="PROV103"
                     /isolation_source="hospital"
                     /db_xref="taxon:2936788"
                     /plasmid="pPROV103-2"
                     /geo_loc_name="China"
                     /lat_lon="39.90 N 116.63 E"
     gene            111..539
                     /locus_tag="M1E89_RS22360"
     CDS             111..539
                     /locus_tag="M1E89_RS22360"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WP_250255063.1"
                     /translation="MKKEFLGLMSLLVISACSSSYERYSSVDQNLCDEFLRIAKNEYLS
                     SKECFRKNIDKYINTGSNSEVVSVVRYECRDDIRKLSYAYLDRAYCSVAEDTYSSYRSV
                     KNDLMDSSGSMLQAISSSVDERLLQYVMYYRANHELPN"
                     /name="hypothetical protein"
     gene            1170..1610
                     /locus_tag="M1E89_RS22365"
     CDS             1170..1610
                     /locus_tag="M1E89_RS22365"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WP_113421940.1"
                     /translation="MSQLFRLASPADYEYIEEIKLWELSFDKRPVQGVRCEDPVIGAEK
                     YNRGREKFKALASRHKKRWKPNGLTFSELIRWAIECGTPEQCQLVLALYHCTNDDDYQA
                     MGIQLSRSIDNANVSSIIFFTGKNQRLLGDVSMLKQLEEKVR"
                     /name="hypothetical protein"
ORIGIN
        1 ggatgaacgg gcggttttcg ctaaccaact cgcccgttta acataaaagg gattatagga
       61 atgcttttta gcgctagact attgttttta atttcaggca agtgaaagta atgaaaaaag
      121 aatttttggg actaatgtcc ttattagtga tttcagcgtg ttcatcatca tatgaacgtt
      181 atagtagtgt tgaccaaaat ttatgtgatg aatttctccg catagcgaaa aatgaatatt
      241 tgagttcaaa agaatgtttt agaaaaaata tagataagta tatcaacact ggctctaatt
      301 cagaggttgt atctgttgtt agatatgaat gtagggatga tattcgtaag ttgtcatacg
      361 cttatctaga tagagcttat tgttcagtgg ctgaagacac ttactcaagc tacaggtctg
      421 taaaaaatga tcttatggat tctagcggta gcatgctaca agctatatcg tcatctgtag
      481 atgagcgtct gttacagtat gttatgtatt atcgagcgaa ccatgaactt ccaaattaaa
      541 gcaaaaaaac cctaatgccc caatgtggta ctaatcaaaa cggagcgaag cgacatcgtc
      601 atcttgtctt tgcttttctc catgatcggt tattgggtca tggcttctta gctctttaat
      661 ttagctaagt ctggttaggt tgggcttctt tcgacggtgc aatccaagaa gtccctagtc
      721 cgttgattga tgctcttatc aggtacgcac tgtaatcttt cgataccgca gcgtgattcg
      781 gaggcagagc cggaatttcg ttttccggta cgttttacta ccacaatttg cctgtttatc
      841 ctttcggaga ccgggctaag tccgagtcaa tcaagtggtg catttgattt aatgtcgttg
      901 aatggtttta aggaagtagt gacaagctag cttcccattg ctaagattgg attaccacat
      961 cgaaatcttt agcaatgaat gcacaagatt tagagtacca gagccccatg accctgtcac
     1021 ggggctttgt tacatctgaa gcctaataac ttctgtaaat tcaactcgca acgctcgccg
     1081 caaggcgtga acttgtttcg cgtcgaggaa gcggaatttc ccgaaagcct tataatatct
     1141 ccgttcacac atcatcggag gggatcacta tgtctcaatt atttcgtttg gcatcaccgg
     1201 cagattacga atacatcgaa gaaataaaat tatgggaatt gtcatttgat aagcgaccgg
     1261 ttcaaggggt tcgttgtgaa gatccggtga tcggggcaga aaaatacaat cgagggcgtg
     1321 aaaaatttaa ggcgttagca tcacggcata aaaaacgctg gaaaccgaac ggattgacct
     1381 tttcagagtt gatccgctgg gcaatagagt gcggaacccc cgaacaatgt cagcttgttt
     1441 tagcgttata tcattgtacg aacgatgacg attatcaggc gatgggaatt cagttaagcc
     1501 gaagtattga taatgcaaat gtcagctcga tcatcttttt caccggtaaa aatcaacgat
     1561 tattaggtga tgtttcgatg cttaaacagc tcgaagaaaa ggtgcgctga cgttaggttt
     1621 acctattatt ttatgtatta tcctatctat tattctatct cttattttat ctatttcgtc
     1681 tgtaataggt agaataatac atagaataag atacagaata agagatagac acaagatgac
     1741 gttgtgttat ttcttaccca ttaatctacc cgttattcta cccattactt tacccgttat
     1801 ttcacccgat ttaggtgtaa cgggtaaagt aatgggtaaa ataacgagtg gaatcatagt
     1861 tttactaact tacaccccat gatactttca gtatcaatgc cactcatttt ctggacgaaa
     1921 atgaatgaca taaggctccg ccctctggct attttcttcg gctggacgcc tgcgaaaaaa
     1981 gccattcacc caagcccgtc aaactcactg cgttcgtctg accaccccct tttttcgccc
     2041 ctgtatttgg tcgctcaaaa atgtggtggt cagacgcttc gcttgacggg gggctttgcc
     2101 cccaaaacga aacacgttca ctggggttca cttgccatcg ctggggcgtg tcatttcgtt
     2161 tcggctcccc ctgtttttcc ctttcttcgc tggacgctca tcaggataaa aacaaaaagc
     2221 ctaccgccct cgttttactc ggttggtcaa atcgcttctt gccacaaaac aagtttgtgt
     2281 ctttcagcga tttcgcatca ttttacttgt cagtttgaat gatgttaaaa acgcactcag
     2341 aagctcgcaa aaccgttcta aactttcagc gtagatttgg gtgttttata gggtgatagt
     2401 gtcttaaaat cgttttgagg ggctttaatg g
//
