LOCUS       NZ_CP095169             2495 bp    DNA     circular CON 21-MAY-2024
DEFINITION  Enterobacter roggenkampii strain K475-2 plasmid pK475-2_2k, complete
            sequence.
ACCESSION   NZ_CP095169
VERSION     NZ_CP095169.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN27363725
            Assembly: GCF_023375565.1
KEYWORDS    RefSeq.
SOURCE      Enterobacter roggenkampii
  ORGANISM  Enterobacter roggenkampii
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.
REFERENCE   1  (bases 1 to 2495)
  AUTHORS   Yin,Y.
  TITLE     Potential Transmission of mcr-10-Harboring Enterobacter spp. among
            Companion Animals and Humans
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2495)
  AUTHORS   Yin,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (06-APR-2022) Baisc Veterinary, Yangzhou University, No.
            48, wenhui east road, hanjiang district, Yangzhou, Jiangsu 225000,
            China
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Method                   :: Unicycler v. v0.4.8
            Genome Representation             :: Full
            Expected Final Version            :: No
            Genome Coverage                   :: 100.0x
            Sequencing Technology             :: Oxford Nanopore MinION
            ##Genome-Assembly-Data-END##
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_023375565.1-RS_2024_05_21
            Annotation Date                   :: 05/21/2024 04:29:14
            Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline
            (PGAP)
            Annotation Method :: Best-placed reference protein set; GeneMarkS-2+
            Annotation Software revision      :: 6.7
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,997
            CDSs (total)                      :: 4,879
            Genes (coding)                    :: 4,763
            CDSs (with protein)               :: 4,763
            Genes (RNA)                       :: 118
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 85
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 116
            CDSs (without protein)            :: 116
            Pseudo Genes (ambiguous residues) :: 0 of 116
            Pseudo Genes (frameshifted)       :: 45 of 116
            Pseudo Genes (incomplete)         :: 79 of 116
            Pseudo Genes (internal stop)      :: 21 of 116
            Pseudo Genes (multiple problems)  :: 21 of 116
            ##Genome-Annotation-Data-END##
            REFSEQ INFORMATION: The reference sequence is identical to
            CP095169.1.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2495
                     /organism="Enterobacter roggenkampii"
                     /mol_type="genomic DNA"
                     /strain="K475-2"
                     /host="healthy cat"
                     /db_xref="taxon:1812935"
                     /plasmid="pK475-2_2k"
                     /geo_loc_name="China: Jinlin"
                     /collection_date="2019"
                     /collected_by="Jilin university"
     gene            join(2407..2495,1..97)
                     /locus_tag="MUY30_RS24935"
                     /old_locus_tag="MUY30_24935"
     CDS             join(2407..2495,1..97)
                     /locus_tag="MUY30_RS24935"
                     /old_locus_tag="MUY30_24935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000165998.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rop family plasmid primer RNA-binding protein"
                     /protein_id="WP_013772937.1"
                     /translation="MTRQESAALNMAKFIRAQTLLLLERLEQMDLDEAAGCCEHLHDQA
                     EALYAMLNAQIGEENA"
                     /name="Rop family plasmid primer RNA-binding protein"
     gene            complement(388..606)
                     /locus_tag="MUY30_RS24940"
                     /old_locus_tag="MUY30_24940"
     CDS             complement(388..606)
                     /locus_tag="MUY30_RS24940"
                     /old_locus_tag="MUY30_24940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001046776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WP_198129632.1"
                     /translation="MFGFSSGALMTLSDDERHLLVSVVSVWLRRAGGDAGAMMLDAYRQ
                     ILSETEPAVRTVMLEFLESVRIHYISS"
                     /name="hypothetical protein"
     gene            1814..2041
                     /locus_tag="MUY30_RS24945"
                     /old_locus_tag="MUY30_24945"
     CDS             1814..2041
                     /locus_tag="MUY30_RS24945"
                     /old_locus_tag="MUY30_24945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010615788.1"
                     /GO_component="GO:0005886 - plasma membrane [Evidence IEA]"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YgdI/YgdR family lipoprotein"
                     /protein_id="WP_021243043.1"
                     /translation="MKKIFVSVFAAAVALSALTGCTRTSYAIHTNDGRTIVSDGKPKES
                     DSGLLGYTDANGVKQQINKTDVKEVSEIPH"
                     /name="YgdI/YgdR family lipoprotein"
     Typing          complement(145..232)
                     /name="MOB_unknown"
                     /typing="oriT"
                     /tool="MOB-suite"
                     /identity="100.0"
                     /coverage="100.0"
                     /evalue="6.86e-39"
     Typing          871..1399
                     /name="rep_cluster_2335"
                     /typing="replicon"
                     /tool="MOB-suite"
                     /identity="88.598"
                     /coverage="88.0"
                     /evalue="0.0"
ORIGIN
        1 tctggatgag gctgccggct gctgtgagca cctgcacgat caggccgaag cgctttacgc
       61 catgctgaac gcacagatag gcgaggaaaa tgcgtgaaaa tcggtgaacg ggtgcgcaat
      121 tcagtgcgcg gccgtgaggc gatggcgggg tgtcggggcg cagccctgac cagggtattt
      181 gtgatgccgg cgcgtgcgcg gtattacaaa tgcacatcct gtcccggaac ggacaccggg
      241 aaacagcaaa aaaaaccggg cggcacgccc ggaactcaat caagttagat tagattactc
      301 tcactcgtcc ataacagcat catggaacga cgaccaccgt ccgtgacggc cgcctcgttt
      361 aagtatggac agaaatacag aaaatgctca ggacgaaatg taatgaatgc gaacggattc
      421 aagaaattcg agcatgacag tccttacggc cggttcggtt tcagacaaaa tctgccggta
      481 tgcatccagc atcatggctc cggcatcccc tccggcacgc cgtagccaga ccgaaacaac
      541 ggacacaagc aggtgtcgct catcatcact aagagtcatc agggctccgg aagaaaaacc
      601 aaacatggct tacctactgt taacggcaac gcagaagaaa ggtttacagg gtagcgggca
      661 gggatgaaaa aaaaaaaatt gcagtcaggc cggaacggct gctgaaccgg tacaggcggg
      721 ttccgggcgc agcgccggac cagtcacgga gcactagcgg agtgtatact ggcttaagat
      781 gtagcatggc agtaacacat agcattaatg ccacataaga caggcgcaga aagtgaaaga
      841 aaacgcgtca ggagaaaatg tgatacagaa tatattccgc ttcctcgctc actgactcgc
      901 tccgctcggt cgttcggctg cggcgagcgg gacgggctta cggatggatc agaaatttcc
      961 tgggggatgc caggaagata cttaacgaag aaagcataag gccgcgccaa agccgttttt
     1021 ccataggctc cgcccccctg acaagcatca cagaatctga cgctcaaatc agtggtggcg
     1081 aaacccgatg cggcttaaag ataccaggcg tttccccctg gtggctccct cgtgctcccc
     1141 cgcattcctg cctttcggtt taccggtgtc actccgctgt tatggccgcg gtttctcatt
     1201 ccacgcctga cactcagttc cgggaaggca gttcgctcca ggatggactg tatgcacgaa
     1261 ccccccgttc agtccgaccg ctgcgcctta tccggtaact atcaacttga gtccaacccg
     1321 gaaagacacg actaatcgcc attggcaacg gccattggca aacaggatgt gcgagagatg
     1381 tctcaagagt tcttgaagtg gcggccttag tgaggctaca ctgaaaggac aaatttggtg
     1441 acatgtctcg cacaagactg ttaccacggt taggggatct gccaggatta cctaaccttc
     1501 gaaaaaccac ctgccagggt ggttttttcg tttacagggc aagagattac gcgcggaaaa
     1561 aaaggatctc aagaagatcc tttataaatt agacatccaa cctcacaaag aggaatactt
     1621 aaatcatctt ggtatatgta tcggccggat tacatctcat ataagcctcc tccccgcctg
     1681 acaccacact ttgaccatag cacctcgcgc ctaactcgat atacagccca ccatcaagcc
     1741 tcttttcaca taaaaaatga cctatagtta gatggttagt gaccaaaact gatatggata
     1801 aaaggagctg gctttgaaaa agatttttgt ttcagtgttc gcagcggcag ttgcgctttc
     1861 agccctcacc ggctgcacgc gcacaagcta tgccatacac accaatgacg gtcgcactat
     1921 tgtcagcgac ggcaaaccta aagaatcaga ctcaggcctg cttggctata cagacgcgaa
     1981 tggtgtcaaa cagcagatca ataaaaccga cgttaaagaa gtctccgaaa ttccgcactg
     2041 agcatcttct ccgaaaaagg ccgctaatgt ggcctttttc tttacctgtg gttctccgcc
     2101 aaaatcccag caaattgcat caccaaagct aaaagctttc agggttgtct aaaaagcaca
     2161 agacataaga ggaagtgcgg tattttataa tcaagccccc aagaatttac cataacatcc
     2221 gttgcccgca ccgcctgaga cgcgttcagc gcgttcctga cgaaaccatg acaaaaacca
     2281 caacaaacca ccccggaacc cgtcagaaac gcgcctgtta aattttaacg gcatgcatga
     2341 ctatgcacca gaatgacgcc atgctctttt cacgcaaaaa tcatcaccag acggggaaaa
     2401 tcaccagtga ccagacagga atccgccgcc ctcaatatgg ccaaatttat ccgcgcacag
     2461 acacttctcc tccttgagcg gctcgagcag atgga
//
