LOCUS       NZ_CP092800             3305 bp    DNA     circular CON 23-MAY-2024
DEFINITION  Klebsiella pneumoniae strain XH1507 plasmid pXH1507-7, complete
            sequence.
ACCESSION   NZ_CP092800
VERSION     NZ_CP092800.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN26270980
            Assembly: GCF_022533525.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Klebsiella/Raoultella group; Klebsiella.
REFERENCE   1  (bases 1 to 3305)
  AUTHORS   Hua,X. and Yu,Y.
  TITLE     The genome sequence of Klebsiella pneumoniae XH1507 and XH1508
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3305)
  AUTHORS   Hua,X. and Yu,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-FEB-2022) Sir Run Run Shaw Hospital, Zhejiang
            University, Qingchundong 3 RD, Hangzhou, Zhejiang 310016, China
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Method                   :: Unicycler v. 0.48
            Assembly Name                     :: XH1507
            Genome Representation             :: Full
            Expected Final Version            :: Yes
            Genome Coverage                   :: 300x
            Sequencing Technology :: Illumina; Oxford Nanopore MinION
            ##Genome-Assembly-Data-END##
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_022533525.1-RS_2024_05_23
            Annotation Date                   :: 05/23/2024 06:08:46
            Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline
            (PGAP)
            Annotation Method :: Best-placed reference protein set; GeneMarkS-2+
            Annotation Software revision      :: 6.7
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,994
            CDSs (total)                      :: 5,874
            Genes (coding)                    :: 5,691
            CDSs (with protein)               :: 5,691
            Genes (RNA)                       :: 120
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 85
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 183
            CDSs (without protein)            :: 183
            Pseudo Genes (ambiguous residues) :: 0 of 183
            Pseudo Genes (frameshifted)       :: 67 of 183
            Pseudo Genes (incomplete)         :: 122 of 183
            Pseudo Genes (internal stop)      :: 26 of 183
            Pseudo Genes (multiple problems)  :: 32 of 183
            ##Genome-Annotation-Data-END##
            REFSEQ INFORMATION: The reference sequence is identical to
            CP092800.1.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..3305
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="XH1507"
                     /isolation_source="pus"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /plasmid="pXH1507-7"
                     /geo_loc_name="China:Hangzhou"
                     /lat_lon="30.3 N 120.2 E"
                     /collection_date="2019-05-10"
                     /collected_by="Xiaoting Hua"
     gene            join(3131..3305,1..248)
                     /locus_tag="ML258_RS29835"
                     /old_locus_tag="ML258_29835"
     CDS             join(3131..3305,1..248)
                     /locus_tag="ML258_RS29835"
                     /old_locus_tag="ML258_29835"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WP_033570825.1"
                     /translation="MKLKFIPIFLFIVTLQAAHSSGIGSTPPPQGKVIYTMNCTFVDDT
                     GKAIGKSQKYILRKGGDGREQMEITPQENAHVPPPIYIQKTSGAYTNGGFKTFYWNNTV
                     RMTVIRGDKTTVEIEFIDSPAISIAKATCDNPVYLP"
                     /name="hypothetical protein"
     gene            complement(515..1045)
                     /locus_tag="ML258_RS29840"
                     /old_locus_tag="ML258_29840"
     CDS             complement(515..1045)
                     /locus_tag="ML258_RS29840"
                     /old_locus_tag="ML258_29840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000168766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WP_033570822.1"
                     /translation="MASTEEKLLTLLLSAEHLKEAAKEQQKAVADSLAVARETLKGYRE
                     ISDSVAQQVRDEVRQEVQKMDIAGLIGERISADFQRLEKSVGNMKINADALDKEISIIR
                     SNIIAEYNTLRGYSWKWFAGVAVAFVVLIFATSWFVKTELQDNYNASAAVYQKVADLEK
                     LLTTELKPEKKKN"
                     /name="hypothetical protein"
     gene            complement(1048..1983)
                     /locus_tag="ML258_RS29845"
                     /old_locus_tag="ML258_29845"
     CDS             complement(1048..1983)
                     /locus_tag="ML258_RS29845"
                     /old_locus_tag="ML258_29845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016235474.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MobA/MobL family protein"
                     /protein_id="WP_033570823.1"
                     /translation="MATYHLSVKFGGKGKALAHASYITREDKFSQRQDLEHTEHGNMPE
                     WARDEPAHFWQAADAFERANGSTYREIEIALPRELNEAQRLALVRDFVKQETGDKHAWT
                     FAIHNPKASIDGGEQPHAHIMMSQRVNDGIERSPEQYFRRYNAKFPARGGARKDSGHNL
                     TPTEQKQALKALRERWERTHNAHMKRYGFEQGFIDSRSLKAQGIDRKPEQHLGFEAAGR
                     LDDSQRQDIKDSRTFSVVDVPEQAKHIDHSDRSWMNASGIEVNRKELVRSLTHDISQQY
                     GREMAARVTKQGNVEIERVKSLSRGFSISR"
                     /name="MobA/MobL family protein"
     gene            2150..2536
                     /locus_tag="ML258_RS29850"
                     /old_locus_tag="ML258_29850"
     CDS             2150..2536
                     /locus_tag="ML258_RS29850"
                     /old_locus_tag="ML258_29850"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WP_033570824.1"
                     /translation="MRISNVEWLKKRIAFIRKLGEKTARQRQIIDLLDDEASLSETDRR
                     LLHVLATAEKNALQERDAAQKKAVQARISGQKNRRERNHKLFLAAGLMIDAGLVDTKTG
                     ELNFDHEKLLTALKRVRYDLETSA"
                     /name="hypothetical protein"
     Typing          complement(1052..1983)
                     /name="MOBQ"
                     /typing="relaxase"
                     /tool="MOB-suite"
                     /identity="95.498"
                     /coverage="100.0"
                     /evalue="0.0"
ORIGIN
        1 agggggggga tggtcgtgag caaatggaga taactccaca agaaaacgca catgtccccc
       61 cccccatata catacaaaaa acaagtggtg cttacaccaa tggtgggttc aaaaccttct
      121 actggaacaa tacagtacgg atgaccgtga tcaggggcga taaaaccact gtggaaatag
      181 agtttattga ttcccctgcg atttcgatag cgaaagccac atgcgacaat cctgtttatt
      241 taccataacg cgtcattacg cgcaccgctc agacgcgctc agggcggttt tacgccctga
      301 gccataaaaa cccccgtttt ctcaccgaaa accgcccaga atcgcatacc gtgactttca
      361 gccccatgca taaccatgca cctgactgac tggcgagaac ttccggcctg aattcaggcc
      421 ggaagtctca aaagacgccc caaacccggc tgaaaacggt gaacgggtgc gcaatttatt
      481 gtgcgaacgt gaggcgttgg acaagcgcag cgcgtcagtt ctttttcttt tccggtttca
      541 gttccgttgt cagcagcttt tcaaggtctg ccactttctg atagacggca gcagacgcgt
      601 tgtaattgtc ctgtagttcc gttttcacaa accagcttgt ggcaaatatc agtacgacaa
      661 aggcaaccgc aaccccagca aaccacttcc agctgtaacc ccgcagcgtg ttgtactccg
      721 cgatgatgtt actgcggata atggaaattt ccttgtccag cgcgtccgca ttgattttca
      781 tgttcccgac ggatttttcc agacgctgaa aatcagcgct gatacgctcg ccgatcagcc
      841 ccgcaatatc cattttctgc acttcctgcc ggacttcatc ccgaacctgc tgcgccacac
      901 tgtccgatat ttcccggtag cctttcaggg tttcccttgc caccgccagc gaatccgcca
      961 cggctttctg ctgctctttt gcggcctctt tcagatgctc cgccgacagc aggagcgtga
     1021 gaagtttttc ttcggtgctc gccatagtta cctgcttatg gaaaatccgc gtgacaggga
     1081 tttcacgcgc tctatttcaa catttccctg ttttgtgacc cgtgcagcca tctcccgccc
     1141 gtactgctgc gagatatcat gcgtcagaga tctgaccagt tccttccggt ttacctcgat
     1201 accgctggca ttcatccagc tacggtcgct gtggtcgata tgcttcgcct gttcaggcac
     1261 atccacgact gaaaacgtcc ggctgtcttt aatatcctgc ctctggctgt cgtccagtcg
     1321 tccggctgct tcaaaaccga gatgctgttc cggtttccgg tcgataccct gtgctttcag
     1381 tgaccggcta tcaataaaac cctgctcaaa gccatatcgt ttcatatgcg cgttgtgcgt
     1441 acgctcccag cgctcccgca gggctttcag tgcctgtttt tgttctgtag gggttaaatt
     1501 atgccctgag tccttgcgcg cgccgccacg cgccggaaat ttggcgttat agcgcctgaa
     1561 atactgttcg ggactgcgct caataccgtc attgacgcgc tggctcatca tgatatgggc
     1621 gtgcggctgt tcgccgccgt caatgctggc tttcggattg tggatcgcaa acgtccatgc
     1681 atgtttgtcg cccgtttcct gcttcacaaa atcccggaca agcgccagcc gctgcgcttc
     1741 attcagctcg cgggggaggg cgatctcaat ttccctgtac gttgaaccgt tggcacgttc
     1801 gaacgcatcc gcagcctgcc agaaatgggc gggttcatct ctcgcccatt ccggcatgtt
     1861 gccgtgttcg gtgtgctcga gatcctggcg ctggctgaac ttatcttccc gcgtgatgta
     1921 actggcatga gcaagggctt tacccttgcc gccaaatttc acactgagat gatacgttgc
     1981 catgttgtgt cagcccccgg cagggcgcac tgtttctgcc cgcagggaga aacatataag
     2041 tgcgctttac tctaatttaa agaattatga gtaaagataa gtcatgcgac ttctaaccgc
     2101 aagttatata ctttccccgt cggaaatatc gggatgggga agttaaacga tgcggatcag
     2161 taacgtcgaa tggcttaaaa agcgcatagc cttcatcaga aagctgggag aaaaaacggc
     2221 acggcaacgg cagattatcg atctgctgga tgatgaagct tcgctcagtg aaactgacag
     2281 acgactgctc cacgttctgg caaccgctga aaaaaacgcg ttgcaggaac gggatgccgc
     2341 acagaaaaag gcggttcagg cgcggatttc agggcagaaa aaccgcaggg aacgcaatca
     2401 caaactattt ctggcggctg gtctgatgat tgacgcggga ctggttgata caaaaacggg
     2461 tgagttgaat tttgaccacg aaaaattact gactgcgctg aaacgggtac gctacgatct
     2521 ggaaacatcg gcgtgaacgt gcattctgca agggcggaga aatgccgctt cctcgctcac
     2581 tgactcgcta cgctcggtcg ttcggctgcg gcgagcggta gggattttcg gataggagca
     2641 tgaattttct tgctccagat gtacaaaagc cccgtgacag aatcacaggg cttcggtact
     2701 ctaattcttc gcagatacct gccaggatca gacgtagcaa tccaatccta gcagggctgg
     2761 ctagccttgt cactaccagc ttaataccat tcaacgacat taaactcata tctgcacctt
     2821 agacgctcag gtctacgccc cggactccgg caggataaac aggcaaacgg tggaaacgta
     2881 acttaaccgc gaaagagtta agctctaccc cgtctcgcag tacgataact ggcacctgat
     2941 aaaatgagcg aacaaggcag cggtaagcgg cgaagtgtga ttgctaaggt ctgacacttc
     3001 acccacacaa tcaagcccct tgcagggtga gagacacaag aaacgagctg gacgaaggtc
     3061 gctctgctcc ccgtgatttt tatataccca ccacgggggc attaggcttt ttttgcaacg
     3121 gagacactac gtgaagctaa aattcatacc tattttttta tttatcgtta cgttacaagc
     3181 cgctcattcc agtggaattg gtagcacgcc cccccctcaa gggaaggtga tatacacaat
     3241 gaattgcact tttgtcgatg ataccggtaa ggctattggt aagtcgcaaa aatacatcct
     3301 gcgaa
//
