LOCUS       NZ_CP091055             2667 bp    DNA     circular CON 24-MAY-2024
DEFINITION  Klebsiella pneumoniae strain AHSWKP25 plasmid pSW25H03, complete
            sequence.
ACCESSION   NZ_CP091055
VERSION     NZ_CP091055.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN24907213
            Assembly: GCF_022592735.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Klebsiella/Raoultella group; Klebsiella.
REFERENCE   1  (bases 1 to 2667)
  AUTHORS   Hao,j.
  TITLE     klebsiella pneumoniae AHSWKP25, complete genome
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2667)
  AUTHORS   Hao,j.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2022) Department of Laboratory Medicine, the
            Affiliated Hospital of Southwest Medical University, 25 Taiping
            street, Luzhou 646000, China
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Method                   :: canu v. 1.7
            Genome Representation             :: Full
            Expected Final Version            :: Yes
            Genome Coverage                   :: 300.0x
            Sequencing Technology             :: nanopore
            ##Genome-Assembly-Data-END##
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_022592735.1-RS_2024_05_24
            Annotation Date                   :: 05/24/2024 05:03:25
            Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline
            (PGAP)
            Annotation Method :: Best-placed reference protein set; GeneMarkS-2+
            Annotation Software revision      :: 6.7
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,808
            CDSs (total)                      :: 5,687
            Genes (coding)                    :: 5,529
            CDSs (with protein)               :: 5,529
            Genes (RNA)                       :: 121
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 86
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 158
            CDSs (without protein)            :: 158
            Pseudo Genes (ambiguous residues) :: 0 of 158
            Pseudo Genes (frameshifted)       :: 59 of 158
            Pseudo Genes (incomplete)         :: 107 of 158
            Pseudo Genes (internal stop)      :: 30 of 158
            Pseudo Genes (multiple problems)  :: 29 of 158
            ##Genome-Annotation-Data-END##
            REFSEQ INFORMATION: The reference sequence is identical to
            CP091055.1.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2667
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="AHSWKP25"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /plasmid="pSW25H03"
                     /geo_loc_name="China:Luzhou"
                     /collection_date="2021-07-25"
     gene            complement(join(2630..2667,1..358))
                     /locus_tag="L1P15_RS28955"
                     /old_locus_tag="L1P15_28955"
     CDS             complement(join(2630..2667,1..358))
                     /locus_tag="L1P15_RS28955"
                     /old_locus_tag="L1P15_28955"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WP_071067467.1"
                     /translation="MAFVSQVDKSRAASSRIGDSSIVVTQSYKASTKAQELSIRLTSLV
                     LSKGGMKIGDHVDVLYDKDSDRWMLRKMDGGLKITGKDDAPTGLIRYTLKDTHARFTEE
                     KEHLPIRKSSIEDSLEIEDGQIIFKLD"
                     /name="hypothetical protein"
     gene            593..868
                     /locus_tag="L1P15_RS28960"
                     /old_locus_tag="L1P15_28960"
     CDS             593..868
                     /locus_tag="L1P15_RS28960"
                     /old_locus_tag="L1P15_28960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001490769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelB/DinJ family
                     antitoxin"
                     /protein_id="WP_224935441.1"
                     /translation="MQFRIESETKKMAKQALEKKGISLSDALRAFLDKLAATEKVMTKE
                     ETWLKEQIEETFSRVDKGEIRYYSEDEADERMNSFISKIENKHETA"
                     /name="type II toxin-antitoxin system RelB/DinJ family
                     antitoxin"
     gene            complement(2355..2618)
                     /locus_tag="L1P15_RS28965"
                     /old_locus_tag="L1P15_28965"
     CDS             complement(2355..2618)
                     /locus_tag="L1P15_RS28965"
                     /old_locus_tag="L1P15_28965"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS-2+"
                     /GO_function="GO:0008657 - DNA topoisomerase type II
                     (double strand cut, ATP-hydrolyzing) inhibitor activity
                     [Evidence IEA]; GO:0042803 - protein homodimerization
                     activity [Evidence IEA]"
                     /GO_process="GO:0030541 - plasmid partitioning [Evidence
                     IEA]; GO:0051290 - protein heterotetramerization [Evidence
                     IEA]"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="WP_004099073.1"
                     /translation="MTSKVLWADKALSDRETIFESNDKVSGLSYAKSEDAKIKRAVSTI
                     KRNNKVGRNDLDVRGYVYVLPKRYKILYRLTDEHIFIERVFY"
                     /name="type II toxin-antitoxin system RelE/ParE family
                     toxin"
ORIGIN
        1 ccagagaatc ctcaatagag gatttacgaa tagggaggtg ctctttctct tcagtaaatc
       61 tcgcatgcgt atccttcagg gtatatctaa tcaaaccggt cggggcatca tccttaccag
      121 taatctttaa ccctccatcc atctttctta acatccagcg atcactatct ttgtcataga
      181 gaacatcaac gtgatcgcca attttcatcc cacctttaga caacactaat gatgtcaacc
      241 taatggatag ctcttgagcc ttagtcgacg ctttgtatga ctgcgttacc actatagacg
      301 aatcaccaat ccgactcgaa gcagctctag acttatcaac ctgactaacg aacgccataa
      361 aacctcctgg tagtttatat tcatgtttat aatacgatcg gataaaacac ttagcaacac
      421 agatctatgt ttttagctga tctctaaact ctctcaaaat ccgaagaaaa aagttacttt
      481 tttccaagca taaatctaag aaaggaagca ttgactgtag ggatcccaga gtctattgtg
      541 agcacaaacg tactcacaat agactctggg atctatatct atggaaacaa gggtgcaatt
      601 cagaattgaa tctgaaacaa agaaaatggc aaagcaagcg cttgaaaaga aagggatttc
      661 acttagcgac gcgctaaggg cgtttctcga taagttagca gcgacggaga aggttatgac
      721 aaaagaagag acatggctga aagagcagat agaagagaca ttctcaaggg tagataaagg
      781 agagatccgc tattactcag aagatgaagc tgatgaacgc atgaactcct tcatctcaaa
      841 aatcgagaac aaacacgaaa ctgcataaaa aaagccgcca atggcggctt tttttatgcc
      901 cttatttacc ataatccctt aattgtacgc accgcccaag cggtctcagg gcgtttccga
      961 cgggaaaccg gtaaaacagg caacaaacaa cccgaaaccc cgccagaaag cgcaggctct
     1021 gtttttacgg catgcatgag tatgcgagca agtgcataac ccggaaattc acaccattca
     1081 gccagggtaa gtcctgtttc cggcgttctt ctcctccgaa aacggtgaac ggggacgcaa
     1141 tttattgcgt ggccgtgaag cgttgccggc gaagccggaa aaccggtttt cagcacgttc
     1201 aggaatcggg ttcgtcgacg accggcaatc acgttatggc aagtcggcgg acgactcacc
     1261 acacgattca ccggcgattc gactcgtgac ttgactctag agtcgccaag gtcacaaaaa
     1321 caccaaaatg acgattcgac tctagagtca agtcgtcata agttactgat agtcttaagt
     1381 gagtcgtcga tgactctatg acaagtcgtc ggcaagtcgt acacgaatcg ccgacgactt
     1441 ggattcacct tacagaaagt aatgctgcct aatttaataa ctcacaacta actgatatta
     1501 atgagttatc ttcaaaattt taattttgcg tggggtgtgg gtatttttag tggtgaggaa
     1561 cattcagaga gttacctgtt ttcgggaagg tttaagaaca tacccgaaag gaaaatgaga
     1621 aaccggagcg tcaggcagct ccgggtaaca cggtgactct tccgcttcct cgctcactga
     1681 ctcgctacgc tcggtcgttc gactgcggcg agcggtgggg cttttacaca aaggagtcca
     1741 tgaaagtgag aaaaaaaaga tgagcactgg ccgtttttcc ataggcttcg cccccctgac
     1801 gagcatgaca agatcttacg ctcaaatcag tggtggcgaa acccgacagg actataaaga
     1861 tcccaggcgt ttccccctgg tggctccccc gtgcgctctc ctgttcctgc cgttcggttt
     1921 accggtgtca ctccgctgtt atggccgcgt ttatctcatt ccacgcctga cactcagttc
     1981 cgggtaggca gttcgctcca agctggactg tatgcacgaa ccccccgttc agtccgaccc
     2041 ccacgacaaa caagcaactc gactcttgaa tccaatcttg tttgactcaa attatgacaa
     2101 tggtggaagc ccgtaataac tgatttgcgg agcgcagaaa gaaggtaagc aaggatatct
     2161 tgaagtgagc agtgaactac ggctacactg aaagaacagt tttggtgact gcgctccgct
     2221 aaagccagtt accaccagtc caatgagttg gtagctcaaa ggactacgaa gaaaccaccg
     2281 ttggtagcgg tggttttctt catcccaaga ttaatagcta aagagacgcg cagtcaagaa
     2341 aggtcggcaa accatcagta gaaaacgcgc tcaataaaaa tatgctcatc cgtcagtcgg
     2401 tacaaaatct tgtatctttt aggtagaaca tagacatagc ctcgcacatc taggtcattt
     2461 ctgcctactt tgttgtttcg ttttatcgtg gaaacagcac gtttaatttt ggcatcttct
     2521 gattttgcat acgacaaacc agagacctta tcgttagact caaagatagt ctctcgatca
     2581 gataatgcct tatctgccca taaaacttta gaagtcatca aacctcccgc taatcaagct
     2641 taaaaataat ctgcccatcc tcaatct
//
