LOCUS       NZ_CP091005             2216 bp    DNA     circular CON 28-JAN-2024
DEFINITION  Staphylococcus epidermidis strain BC1191 plasmid pSEBC1191-7,
            complete sequence.
ACCESSION   NZ_CP091005
VERSION     NZ_CP091005.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN18740298
            Assembly: GCF_021513095.1
KEYWORDS    RefSeq.
SOURCE      Staphylococcus epidermidis
  ORGANISM  Staphylococcus epidermidis
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus.
REFERENCE   1  (bases 1 to 2216)
  AUTHORS   Morand,S.C.
  TITLE     Staphylococcus epidermidis strain:BC1191 genome, complete sequence
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2216)
  AUTHORS   Morand,S.C.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2022) Advanced Research, L'Oreal, 1 Avenue Eugene
            Schueller, Aulnay-Sous-Bois 93600, France
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Date                     :: JAN-2022
            Assembly Method :: MaSuRCA v. 3.4.1; Unicycler v. 0.4.8
            Genome Representation             :: Full
            Expected Final Version            :: Yes
            Genome Coverage                   :: 1809.0x
            Sequencing Technology :: Illumina HiSeq; Oxford Nanopore MinION
            ##Genome-Assembly-Data-END##
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Date                   :: 01/28/2024 02:46:29
            Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline
            (PGAP)
            Annotation Method :: Best-placed reference protein set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,349
            CDSs (total)                      :: 2,266
            Genes (coding)                    :: 2,202
            CDSs (with protein)               :: 2,202
            Genes (RNA)                       :: 83
            rRNAs                             :: 7, 6, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 7, 6, 6 (5S, 16S, 23S)
            tRNAs                             :: 60
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 37 of 64
            Pseudo Genes (incomplete)         :: 34 of 64
            Pseudo Genes (internal stop)      :: 25 of 64
            Pseudo Genes (multiple problems)  :: 26 of 64
            ##Genome-Annotation-Data-END##
            REFSEQ INFORMATION: The reference sequence is identical to
            CP091005.1.
            Bacteria and source DNA available from L'OREAL.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2216
                     /organism="Staphylococcus epidermidis"
                     /mol_type="genomic DNA"
                     /strain="BC1191"
                     /host="Homo sapiens"
                     /db_xref="taxon:1282"
                     /plasmid="pSEBC1191-7"
                     /geo_loc_name="France"
                     /collection_date="2012-01"
     gene            complement(203..1126)
                     /locus_tag="KB233_RS11710"
                     /old_locus_tag="KB233_11710"
     CDS             complement(203..1126)
                     /locus_tag="KB233_RS11710"
                     /old_locus_tag="KB233_11710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002499696.1"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006260 - DNA replication [Evidence IEA]"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein rep"
                     /protein_id="WP_031864528.1"
                     /translation="MEKYTEKKRRNQVFQKFIERHVKEGQMDLIRECNTFLSFVADKTL
                     EKQKLHKSNLCKNRFCPVCAWRKARKDALGLSLMMQYIKQKEDKQFIFLTLTTPNVTAE
                     HLESEIKAYNHSFQKMFKRKKVISATKGYVRKLEITYNKERDDYNPHFHVLIAVNKSYF
                     TDKRYYISQKEWLELWRDVTGISEITQVQVQKIRQNNNKELYEMAKYSGKDSDYLINQK
                     VFDAFYKSLKGKQVLVYSGLFKDAKKKLKNGDLDYLKEIDPTEYVYQIFYMWNKNEYLA
                     SEIFDLTDEEKQKINHQMINEIEEEK"
                     /name="protein rep"
     Typing          complement(208..1126)
                     /name="rep_cluster_1281"
                     /typing="replicon"
                     /tool="MOB-suite"
                     /identity="86.985"
                     /coverage="99.0"
                     /evalue="0.0"
ORIGIN
        1 tggctaccga atggctacat aaggagacat ttctgtgtag gattcctctt atgctctttt
       61 aatagcaata gttgcaatat tacacctgta taccctcata tttttcattt caaaatctca
      121 aacctttttc agaaaaacat ctttaatttt ttctaacaaa acaaaaaacg ctcactcttt
      181 ttttcgagta gcgttttgtt ttttattttt cttcttcaat ttcatttatc atttgatgat
      241 ttattttttg tttttcttcg tctgttaaat caaaaatttc actcgctaaa tattcatttt
      301 tattccacat gtaaaaaatt tgatacacgt attcggttgg atcaatttct tttaagtaat
      361 ctaaatctcc attttttaat ttctttttag catctttaaa taatcctgaa taaactaata
      421 cctgtttacc tttaagagat ttatagaatg catcaaatac tttttgattt attaaataat
      481 cactatcttt accagaatac ttagccattt catataactc tttattgtta ttttgtctta
      541 ttttttgaac ttgaacttgt gtaatttctg aaattcccgt tacgtcacgc cataattcaa
      601 gccattcttt ttggctaata taatatcttt tatctgtaaa atatgactta tttactgcaa
      661 ttaaaacatg aaaatgcggg ttatagtcat cacgttcttt attgtaagta atttctaatt
      721 ttcttacata acctttcgta gcagaaatta cttttttacg cttaaacatc ttttgaaaag
      781 agtgattata agctttaatt tcactttcta aatgctcagc tgtaacattt ggcgtggtaa
      841 gtgttaaaaa gatgaattgt ttatcttctt tttgcttaat atattgcatc atcaatgata
      901 aacctaacgc atcttttctc gcttttcgcc atgcacatac aggacaaaat cgatttttac
      961 ataaattaga tttatgcaat ttctgtttct ctaatgtttt atctgccaca aaactcaaga
     1021 atgtattgca ctcccttatc aaatccattt gtccttcttt gacatgccgt tcaataaatt
     1081 tctgaaatac ttgatttctc cgttttttct cagtatactt ttccatatat taaatcactg
     1141 taaaaacaac taagttgtat acaaagtttt tataacaaaa aagttgcttt ttctcctttc
     1201 atgtaaagtt ttggtttggt caccataaac tctactatac taggtatgaa aaagcaactt
     1261 tttttgcgtt caaagacagt catatcaact aatctagaga taggtaacca tacgggaata
     1321 gttacctata gtatcaagac aagaagaaac tcgtttcact cgtttcaaaa aagccaaaaa
     1381 atctcatcgt taaatacttt taaatgcact attaataaat aaatgataaa gtgaaaatgt
     1441 aacatcatcc ccacatatca ttaaatcttt taatatgaaa aagttctttt accctccata
     1501 gccacttaat tgttgagtgg ctatttttaa tgctttattc caattgcttt ttggttggaa
     1561 ccaacggagc ataatgtgtt gttgagttgg tacttcgttg ggattaatcc caacaaacca
     1621 ccaaccaact cgctaacata gttagctaac acatagctca ttccaaccaa aaattttctc
     1681 ggcataaatg catgtggtat gcttaatata gtgctctttt tcaatcgcac agcattttat
     1741 agcaattctc cagaccactc atttttgagt ggttctttta ttttgcattt taagcccttt
     1801 ctacgacatt taatcatttc gaatataaaa acaaacaaaa atttctttcg ttcaaaagag
     1861 aggctatgaa tcattttaaa attcatttct caacactttc agaaagaaaa atatattttt
     1921 aatctcaatt attcttctta gaaaaaagct aaaacccgat taataatatt caaaaaaggc
     1981 agcagtgcat tttgattttg gctaccattt ggctcccttt tagctcccaa atggctacct
     2041 aataatgtag ctatttggta tccattttta attttaggta tccatatggt atccattttt
     2101 gattttgtgt agctattcgg tagcttttgt gtagccgttc gggagtcata taacaatttt
     2161 tatcgcataa ataggaatcc catttgacac tgtcaaatca atattttgca cagaaa
//
