LOCUS       NZ_CP090799             2391 bp    DNA     circular CON 21-APR-2024
DEFINITION  Enterobacter hormaechei strain Y-2 plasmid pY-2.p3, complete
            sequence.
ACCESSION   NZ_CP090799
VERSION     NZ_CP090799.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN24596082
            Assembly: GCF_021491635.1
KEYWORDS    RefSeq.
SOURCE      Enterobacter hormaechei
  ORGANISM  Enterobacter hormaechei
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.
REFERENCE   1  (bases 1 to 2391)
  AUTHORS   Wang,H., Su,J., Pang,D., Hu,Z., Wang,J. and Zheng,W.
  TITLE     Characteristics of drug resistance and whole-genome sequencing of
            two IMP-producing Enterobacter cloacae in Hohhot
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2391)
  AUTHORS   Wang,H., Su,J., Pang,D., Hu,Z., Wang,J. and Zheng,W.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JAN-2022) Laboratory Medicine, Affiliated Hospital,
            Inner Mongolia Medical University, Tongdao North Street, Hohot,
            Inner Mongolia 010050, China
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Date                     :: 21-JUL-2021
            Assembly Method                   :: Unicycler v. 0.4.8
            Genome Representation             :: Full
            Expected Final Version            :: Yes
            Genome Coverage                   :: 100.0x
            Sequencing Technology             :: Illumina
            ##Genome-Assembly-Data-END##
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_021491635.1-RS_2024_04_21
            Annotation Date                   :: 04/21/2024 04:37:55
            Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline
            (PGAP)
            Annotation Method :: Best-placed reference protein set; GeneMarkS-2+
            Annotation Software revision      :: 6.7
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,492
            CDSs (total)                      :: 4,377
            Genes (coding)                    :: 4,315
            CDSs (with protein)               :: 4,315
            Genes (RNA)                       :: 115
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 83
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 62
            CDSs (without protein)            :: 62
            Pseudo Genes (ambiguous residues) :: 0 of 62
            Pseudo Genes (frameshifted)       :: 21 of 62
            Pseudo Genes (incomplete)         :: 42 of 62
            Pseudo Genes (internal stop)      :: 13 of 62
            Pseudo Genes (multiple problems)  :: 12 of 62
            Pseudo Genes (short protein)      :: 1 of 62
            ##Genome-Annotation-Data-END##
            REFSEQ INFORMATION: The reference sequence is identical to
            CP090799.1.
            Bacteria and source DNA available from Department of Laboratory
            Medicine, Affiliated Hospital of Inner Mongolia Medical University,
            Hohhot, Inner Mongolia, China.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2391
                     /organism="Enterobacter hormaechei"
                     /mol_type="genomic DNA"
                     /strain="Y-2"
                     /isolation_source="urine"
                     /host="Homo sapiens"
                     /db_xref="taxon:158836"
                     /plasmid="pY-2.p3"
                     /geo_loc_name="China:Hojhot"
                     /collection_date="2017-07"
     gene            1..420
                     /locus_tag="L0Y15_RS22440"
                     /old_locus_tag="L0Y15_22440"
     CDS             1..420
                     /locus_tag="L0Y15_RS22440"
                     /old_locus_tag="L0Y15_22440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000660103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="WP_063135506.1"
                     /translation="MSHMKKTTFSGRWNEKALSMGWTAIPNALFFMQRPLGISPTNFNV
                     LLNLFIHWWEAGTWPYPSQKGLASRMGVSVRTIQRSLDEMTEMGLIEKTATMRNHPRYK
                     GRNIYDLTPIIKMIEEMAPELKRTVGNKKSDSQEG"
                     /name="helix-turn-helix domain-containing protein"
     Typing          1312..1679
                     /name="rep_cluster_2373"
                     /typing="replicon"
                     /tool="MOB-suite"
                     /identity="96.206"
                     /coverage="85.0"
                     /evalue="2.25e-170"
ORIGIN
        1 atgtcacata tgaaaaaaac cactttcagc ggtcgatgga atgaaaaagc actatctatg
       61 gggtggacgg ctatccctaa cgctcttttc ttcatgcaaa ggcctttagg tatatctcca
      121 accaacttta atgtgctgct aaatctcttt attcactggt gggaagcagg cacatggcca
      181 tatccttcac aaaaaggttt ggcatctcgt atgggggttt cggttcgtac tatccaacgc
      241 tctttagatg agatgacaga gatggggctt atagaaaaaa cagccactat gagaaaccat
      301 cccagataca aagggcgaaa catttacgac ttaactccca tcattaaaat gatcgaagaa
      361 atggctccag agctaaaaag gactgtaggc aataaaaaaa gcgacagcca agaggggtag
      421 ttacacggca agcataatta aaacaacgaa tgcgatttac cataacatcc gttgcccgta
      481 ccacctgaga cgccctcagc gcgtttttgc ggcctcaggg ccgtttccgg gatctttccc
      541 cgtgcagaac cccgaaaaat gcccctgatg attctggcgc gtctgcatgg ctatgcacac
      601 gaacgcatgg ccgccatttt agcggctaaa atccggcgag cgccctgaaa gacatcatga
      661 acaaccctga taacgcctca cgggtgcgca gtttactgtg cggccgtgag gcgttggcca
      721 gaccgtcagg catggaagga tttattgcta agggggtcgg atttaacgtg gcttaatcag
      781 cacgcaatga tgaacgggat tcggaagggg cacccttgcg gcgcggcgat gtatacatcg
      841 ctaacgtgcc ttaatctttg cactgctgaa ggtagcggta gcaaacagat agcaaacaga
      901 tagcaaacag gtagcaaaca agtagcaaaa gggaagcaaa cagatagcaa acatacgggt
      961 gtcgggcaga gcctgaccag gagtcattgg cgtgccggcg gtactccaaa aacacatctt
     1021 gtcccgctgt tttgtaacat gggcaaactg gctgtggtca caaaacattt cctgtccgat
     1081 gctttaacat ttgtaatcca ggagcatcag gtgacgtcac tttgcggcgt tagccctatc
     1141 ctgcatccta tgaaaaaatg cagttatgga gtgtaaggtg ccggacgtga gcccgaagat
     1201 attccgcttc ctcgctcact gactcgctac gctcggtcgt tcggctgcgg cgagcggacg
     1261 gagaagatac ataaaggcat acggcgatga agaaggggtt aggcaggatg aagaaaggcc
     1321 gcggagctgc cggttttcca taggctccgc ccccctgaca agcatcacag aatctgacgc
     1381 tcaaatcagt ggtggcgaaa cccgacagga ctataaagat cccaggcgtt tccccctggt
     1441 agctccctcg tgcgctctcc tgttcctgcc tttcggttta ccggtgtcac tccgctgtta
     1501 tggccgcgtt tatctcattc cacgcctgac actcagttcc gggtaggcag ttcgctccaa
     1561 gctggactgt atgcacgaac cccccgttca gtccgaccgc tacgccttat ccggtaacta
     1621 tcatcttgag tccaacccgg aaagacacga cttaacgcca ctggcagcgg ccactggtaa
     1681 acaggatgtg cgagagatgt atcgagagtt cttgaagtgg cgaccggact acggctacac
     1741 tggaaggacg aattgggtga catgtctcgc acaagactgt taccacggtt agataatctg
     1801 ccaggattaa ctaaccttcg aaaaaccacc tgccagggtg gttttttcgt tttcagggta
     1861 cgctggaaaa gtaaacgacg tcaagaagct agctgaccgc catgaaaaat atacagaaaa
     1921 agacgctttt gcttaaaaat taagcaaaaa acgattgggt atgattatta ccattcggta
     1981 gcgcagtgaa ttgagatatg attgccaaga tgcctgaaaa gaatggcagt tgcgggagag
     2041 gcctacctct tcgctgcaac gaagaagcat ggcctctctg taaatactca actacagact
     2101 aggaggcgaa aatgctagaa gattatcttc aagcgctcat cgcgctgctc actttgctga
     2161 gcatcatttt gaaatactgt taatttgaga tgttactgta gtacttcggc cgtccctgtg
     2221 ggcggccttt tttttgtgtt caaaatgatc ataggttgca ggcaggcata cacgcaatac
     2281 gccacaatgt catactatat taatattaat atagatatat atcgaagacc tgtgtttaaa
     2341 ttgctgttat ctcataggag ataacagcaa tttaaacaca ggtcttcgat t
//
