LOCUS       NZ_CP087308             2097 bp    DNA     linear   CON 12-SEP-2023
DEFINITION  Acinetobacter baumannii strain OC081 plasmid p4OC081.
ACCESSION   NZ_CP087308
VERSION     NZ_CP087308.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN23078461
            Assembly: GCF_024749385.1
KEYWORDS    RefSeq.
SOURCE      Acinetobacter baumannii
  ORGANISM  Acinetobacter baumannii
            Bacteria; Pseudomonadota; Gammaproteobacteria; Moraxellales;
            Moraxellaceae; Acinetobacter; Acinetobacter calcoaceticus/baumannii
            complex.
REFERENCE   1  (bases 1 to 2097)
  AUTHORS   Mellmann,A.
  TITLE     Sequencing of Acinetobacter baumannii genomes to construct genome
            database for SNP detection
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2097)
  AUTHORS   Mellmann,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-NOV-2021) Inst. Hygiene, University Hospital Muenster,
            Robert-Koch-Str. 41, Muenster 48149, Germany
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Method                   :: HGAP v. 4
            Genome Representation             :: Full
            Expected Final Version            :: Yes
            Genome Coverage                   :: 653x
            Sequencing Technology             :: PacBio Sequel
            ##Genome-Assembly-Data-END##
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Date                   :: 09/12/2023 05:51:05
            Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline
            (PGAP)
            Annotation Method :: Best-placed reference protein set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,927
            CDSs (total)                      :: 3,831
            Genes (coding)                    :: 3,753
            CDSs (with protein)               :: 3,753
            Genes (RNA)                       :: 96
            rRNAs                             :: 6, 6, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 6, 6 (5S, 16S, 23S)
            tRNAs                             :: 73
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 78
            CDSs (without protein)            :: 78
            Pseudo Genes (ambiguous residues) :: 0 of 78
            Pseudo Genes (frameshifted)       :: 38 of 78
            Pseudo Genes (incomplete)         :: 33 of 78
            Pseudo Genes (internal stop)      :: 23 of 78
            Pseudo Genes (multiple problems)  :: 14 of 78
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
            REFSEQ INFORMATION: The reference sequence is identical to
            CP087308.1.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
FEATURES             Location/Qualifiers
     source          1..2097
                     /organism="Acinetobacter baumannii"
                     /mol_type="genomic DNA"
                     /strain="OC081"
                     /host="Homo sapiens"
                     /db_xref="taxon:470"
                     /plasmid="p4OC081"
                     /geo_loc_name="Germany"
     gene            complement(9..1140)
                     /locus_tag="LOZ96_RS19635"
                     /pseudo=""
     CDS             complement(9..1140)
                     /locus_tag="LOZ96_RS19635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_032072965.1"
                     /GO_function="GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo=""
                     /codon_start=1
                     /transl_table=11
                     /product="IS3-like element ISAba14 family transposase"
                     /name="IS3-like element ISAba14 family transposase"
     gene            complement(1671..>2097)
                     /locus_tag="LOZ96_RS19640"
     CDS             complement(1671..>2097)
                     /locus_tag="LOZ96_RS19640"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WP_258580035.1"
                     /translation="SAVGLDFATGMKSSVGLIALVVALYFAIKWDIPKAMLYPTVAVLL
                     VVCLFPALNYYALEASEKSFNQTTNFLGQPVQEFSATTITVMWGMWYMKAVYMLVAGLM
                     ELFYKELGILKKIIFKLLSKKSQLYWLFYFSKRLFLV"
                     /name="hypothetical protein"
ORIGIN
        1 cgctctagtt aagccacctt gttttgttgg ggtagctgat catagtaaaa ctcatttggt
       61 gtcattttgt ctagactcga atgaggtcgt ttcaaattat aaaactcaaa atatgcactt
      121 aattgctttt tcgcatctgt gacactgcta taagctttga gatacacctc ttcatattta
      181 acgctccgcc ataatcgttc aaccatcaca ttatctacca tcgaccttta ccatccatac
      241 tgatttgaat gccatttgat ttcaatacat caataaatgc atcactggta aactggctgc
      301 cttggtctgt attaaatatt tcaggtcgac catatttttc aatcgcttca tttaaagccg
      361 aaatacaaaa atccacctcc atactaatcg atactctatg cgcaagtacc ttgcggctat
      421 gccaatcaat cacagcacat aaataaacaa agccttttgc catagggata tacgttatat
      481 ccgtagacca cacttgatta ctgcgctgaa tagccaatcc tttgagcagt tatggatatt
      541 tacggtgagc ttgattagcc tggcttaaat ttggtttgca atataacgcc tgaataccca
      601 ttttcttcat taaagtacgt gtatgacgtc gtcctatatg atgtccttga cgattcaaca
      661 aatcacgcat catacgactg cctgcaaaag gatattgcat atgtaattca tcaatacatc
      721 gcatcagctt cagatctgat gcactcacag gttttgggcg atagtaataa caaccacggg
      781 agactttcag cagcttagct tgcttagata ctgaaatctg aagtgagtcg tcgattaact
      841 tttgtggttg aagcggccca gtttcttcaa cacaccttct aaaaaatcaa tttctaatgc
      901 ctgctcaccg atttttgcat gtagtttttt tagatcgatg ggtggttctg ttggagcttt
      961 tgattgatcg aaagcttgcg aggaagctga gatcaattga tttttccagt caataatttg
     1021 gttttgatga acatcaaact cagcactcaa ttcagcaagt gttttttctg ctttaatcgc
     1081 agcaagtgct accttagctt taaaatcatt tgaatgattt cttcttggtc tacgtgccat
     1141 aaaatactcc atatattgat gtttataaca tcatttgagg agcagaatat cactttatag
     1201 gagttgttca aatttacgga tccatctctt taaacatact gaaaattttg attttcgttg
     1261 tagctttagt tatttttatt aaattcatta taagtgaata cttaggtgta atttttagca
     1321 aagaattaca gtttttgcgg ggatgttttt agcactcgca attcttgttt atgaattatt
     1381 tcaatttgta tatctagact aattataaaa ttcactatga cgcagatcaa cgtgaagcta
     1441 ttgaaacatt tgaaagcatc aacttaatgt tggctttatc gtagctgact tgccaaaaga
     1501 tcaaaaaaac aatgagttaa aagattgtgt tgaagcttat atcactctag cgaaacaaat
     1561 ttacatttgt tttgattaat tcagacaatg tatctacttc aggaatatat ttttcagggc
     1621 aacgtggaaa gcgtgaccat aataaataca aaatcatcat taaaagaaac ttagactaaa
     1681 aacaaccttt tagaaaaata aaaaagccag tataactggc tttttttgct tagtagctta
     1741 aaaataattt tcttcaggat acctaattct ttgtagaaca actccattaa gcccgctaca
     1801 agcatgtaaa ccgctttcat ataccacatg ccccacataa cggtaattgt ggtcgctgaa
     1861 aattcttgta ctggctgacc aagaaaatta gttgtttgat taaatgattt ttctgaagct
     1921 tcaagcgcat aataatttaa tgcagggaat aagcagacaa ccaataaaac agctaccgta
     1981 gggtaaagca tagctttagg tatatcccat ttgatagcaa agtacagcgc cactaccaaa
     2041 gcaattaagc caacactaga cttcattcca gtggcaaaat ctaaacctac ggcactt
//
