LOCUS       NZ_CP087307             2359 bp    DNA     circular CON 12-SEP-2023
DEFINITION  Acinetobacter baumannii strain OC081 plasmid p2OC081, complete
            sequence.
ACCESSION   NZ_CP087307
VERSION     NZ_CP087307.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN23078461
            Assembly: GCF_024749385.1
KEYWORDS    RefSeq.
SOURCE      Acinetobacter baumannii
  ORGANISM  Acinetobacter baumannii
            Bacteria; Pseudomonadota; Gammaproteobacteria; Moraxellales;
            Moraxellaceae; Acinetobacter; Acinetobacter calcoaceticus/baumannii
            complex.
REFERENCE   1  (bases 1 to 2359)
  AUTHORS   Mellmann,A.
  TITLE     Sequencing of Acinetobacter baumannii genomes to construct genome
            database for SNP detection
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2359)
  AUTHORS   Mellmann,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-NOV-2021) Inst. Hygiene, University Hospital Muenster,
            Robert-Koch-Str. 41, Muenster 48149, Germany
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Method                   :: HGAP v. 4
            Genome Representation             :: Full
            Expected Final Version            :: Yes
            Genome Coverage                   :: 653x
            Sequencing Technology             :: PacBio Sequel
            ##Genome-Assembly-Data-END##
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Date                   :: 09/12/2023 05:51:05
            Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline
            (PGAP)
            Annotation Method :: Best-placed reference protein set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,927
            CDSs (total)                      :: 3,831
            Genes (coding)                    :: 3,753
            CDSs (with protein)               :: 3,753
            Genes (RNA)                       :: 96
            rRNAs                             :: 6, 6, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 6, 6 (5S, 16S, 23S)
            tRNAs                             :: 73
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 78
            CDSs (without protein)            :: 78
            Pseudo Genes (ambiguous residues) :: 0 of 78
            Pseudo Genes (frameshifted)       :: 38 of 78
            Pseudo Genes (incomplete)         :: 33 of 78
            Pseudo Genes (internal stop)      :: 23 of 78
            Pseudo Genes (multiple problems)  :: 14 of 78
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
            REFSEQ INFORMATION: The reference sequence is identical to
            CP087307.1.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2359
                     /organism="Acinetobacter baumannii"
                     /mol_type="genomic DNA"
                     /strain="OC081"
                     /host="Homo sapiens"
                     /db_xref="taxon:470"
                     /plasmid="p2OC081"
                     /geo_loc_name="Germany"
     gene            join(1630..2359,1..455)
                     /locus_tag="LOZ96_RS19625"
     CDS             join(1630..2359,1..455)
                     /locus_tag="LOZ96_RS19625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003115284.1"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006260 - DNA replication [Evidence IEA]"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein rep"
                     /protein_id="WP_064847543.1"
                     /translation="MNIFYGENPSSASLKSLENSQSLGIKTKSHVMLTPQGFQRVHDYL
                     LQDQSRKLLPKERVSKCRRLRIDKTKTRTVMYNEHREKAHYGNVQICGSIWSCPVCAKQ
                     ITQKRRNELGKGIESWKTVHNGSVYLLTLTFSHSPDQSLKSNLEGLKRAMKRFYETTRV
                     QAIFKKLSVFHKIKGLEVTYGQNGWHPHHHVLLLAEHHDLRFKDYTSELTELWIKACIK
                     SGLNAPSMRHGLDLRNGSYADQYVSKWGLEDELSKGHVKKGRNGGFTPFDLLNFSIEDN
                     EIYGKKPSKLFQEFAISMKGARQLVWSRGLKKLLGIEEKSDEELAVETDKASITLNRVE
                     DLVFELLCRYQLRHQYLEAIKHDYETGSFGSGLADQLIEQVVNYEIKQMQQVFS"
                     /name="protein rep"
     gene            521..676
                     /locus_tag="LOZ96_RS19630"
     CDS             521..676
                     /locus_tag="LOZ96_RS19630"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WP_153565175.1"
                     /translation="MATEMRQKFNCDVIFNVAEAEDTTMRMDGDLTFDEMFEPQEIFSK
                     YMEPMH"
                     /name="hypothetical protein"
     Typing          2..455
                     /name="rep_cluster_586"
                     /typing="replicon"
                     /tool="MOB-suite"
                     /identity="99.78"
                     /coverage="100.0"
                     /evalue="0.0"
ORIGIN
        1 aatatgtgtc taagtggggc cttgaagatg aactttcgaa agggcatgtg aaaaaaggtc
       61 gcaatggtgg ttttacccct tttgatcttt taaatttttc tattgaagat aatgaaattt
      121 atggaaaaaa accttctaaa cttttccaag aatttgccat ttctatgaag ggtgctcgcc
      181 aactagtttg gtctcgaggt cttaaaaaac ttttaggtat tgaagaaaaa agtgacgagg
      241 aacttgcagt agaaactgac aaagcttcca ttactttgaa tcgtgttgaa gatctcgttt
      301 ttgaactttt atgtcgttat caattgcgtc atcaatatct tgaagcaatt aaacatgatt
      361 atgagactgg ctcttttggt tctggattag cagatcaact tattgagcaa gtagtgaatt
      421 atgaaattaa acaaatgcag caggtatttt cgtgattgaa gcaatttata tttccatagg
      481 taagattcat cgaaatgtac ctaaactaat ttgggataac atggccacag aaatgcgcca
      541 aaaatttaat tgtgacgtga tcttcaatgt tgctgaagct gaagatacga ctatgcgtat
      601 ggatggtgat ttaacttttg atgaaatgtt tgaacctcaa gaaatattta gtaagtacat
      661 ggaaccaatg cattaattat taaatcactt aatggcgttt ggcgtgcgat gcacgcacat
      721 aacgccatta agagagttct tattagcctg gaatattcca ggcttttttg cgtgtacgca
      781 taaatcaaaa agaaccaaat tgacaacatg acaacatgac aacatgacaa caagacaatt
      841 tgacaacatg aaaacatgac aacaacttag gctatctatg caccactggt gcatgaatat
      901 ttgggcgcaa tatcagcgtg gcgggggtcg gtgggatgtg cggagcgcgt cctgccgccc
      961 gcgcgatgct gatatgagag cagatattta ttttcagcct gaaaatgaaa aaacagagcg
     1021 ggtgtctacc cgcgaactga cacaaaacga tttaaaacct tccctctctg attacaagct
     1081 ccctttagcc taagaacggg agttaccgag ctttgctcgc aggatgcttt tgtttctcga
     1141 atgagaaacg cgtaagcgtg cattcctgaa aaaacaccct aatttgctag gtggaaaaca
     1201 cacaaagaac ctgtactaaa actagggaga ataaatataa gaaaggagat tcacttatgc
     1261 ttgattatga ttttattaat ttgattcttt tcgttttatc gaccttgtac acaattttgg
     1321 ggtattacaa aaaatgatat tccaatctat taaaaacaag gcgggacaat tacgaggagt
     1381 gaggaggagg gcacgcacga ccgacacgac cgaggaattg gcagagcctt gtatttactg
     1441 cgtgtatctc tcgtatatac ggggtgttgt catgaaaact tgttgtcttg cttttaggaa
     1501 tttttcagta gtaatatcaa cttgcactaa agtcctgtgc gaaagaccta gtaaaccgta
     1561 caggcataaa aatgggctga cagtgctgga acacttcaac ccagtgatca acataattaa
     1621 ggtatgtcga tgaatatatt ttatggggaa aatccgtcct cagcaagctt aaagagcctc
     1681 gaaaatagcc agtcccttgg tataaagacg aaatctcatg taatgcttac gccacaaggc
     1741 tttcagcgtg tgcatgatta tctattacaa gaccaatcta gaaaacttct tcctaaagaa
     1801 cgtgtatcta aatgtagacg tctccggatc gataaaacta agactagaac tgttatgtac
     1861 aacgagcatc gagagaaggc tcattatggc aatgttcaaa tctgcggttc tatttggtca
     1921 tgtcctgttt gtgccaagca aatcacacag aaaagacgta atgaattagg taagggcata
     1981 gagtcgtgga aaacggttca taatggctct gtatatctcc ttacgcttac ttttagccat
     2041 tcacctgacc aatccctcaa aagtaattta gagggcctta aacgcgcaat gaagcgtttt
     2101 tatgagacaa ctcgagttca ggctattttt aaaaaactat ctgtttttca caaaataaaa
     2161 ggcctagaag ttacatacgg tcagaatggt tggcatcccc atcatcatgt acttctttta
     2221 gctgaacatc atgatttacg ttttaaagat tacacttctg aattaacgga gttatggatt
     2281 aaagcctgta ttaaatcagg attaaatgct ccatcgatgc gccacggttt agatcttcga
     2341 aatggctctt atgctgacc
//
