LOCUS       NZ_CP080453             2178 bp    DNA     circular CON 10-JAN-2024
DEFINITION  Acinetobacter baumannii strain MRSN 56 plasmid pMRSN56-1, complete
            sequence.
ACCESSION   NZ_CP080453
VERSION     NZ_CP080453.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN19955388
            Assembly: GCF_019458485.1
KEYWORDS    RefSeq.
SOURCE      Acinetobacter baumannii
  ORGANISM  Acinetobacter baumannii
            Bacteria; Pseudomonadota; Gammaproteobacteria; Moraxellales;
            Moraxellaceae; Acinetobacter; Acinetobacter calcoaceticus/baumannii
            complex.
REFERENCE   1  (bases 1 to 2178)
  AUTHORS   Harmer,C.J., Stam,J.A., Hall,R.M. and McGann,P.
  TITLE     The complete sequence of Acinetobacter baumannii strain MRSN 56
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2178)
  AUTHORS   Harmer,C.J., Stam,J.A., Hall,R.M. and McGann,P.
  TITLE     Direct Submission
  JOURNAL   Submitted (01-AUG-2021) School of Life and Environmental Sciences,
            The University of Sydney, Cnr Maze Cres and Butlin Ave, The
            University of Sydney, NSW 2006, Australia
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Date                     :: MAY-2021
            Assembly Method                   :: Unicycler v. 0.4.0
            Genome Representation             :: Full
            Expected Final Version            :: Yes
            Genome Coverage                   :: 60.0x
            Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MinION
            ##Genome-Assembly-Data-END##
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Date                   :: 01/10/2024 03:06:04
            Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline
            (PGAP)
            Annotation Method :: Best-placed reference protein set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,917
            CDSs (total)                      :: 3,820
            Genes (coding)                    :: 3,735
            CDSs (with protein)               :: 3,735
            Genes (RNA)                       :: 97
            rRNAs                             :: 6, 6, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 6, 6 (5S, 16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 85
            CDSs (without protein)            :: 85
            Pseudo Genes (ambiguous residues) :: 0 of 85
            Pseudo Genes (frameshifted)       :: 36 of 85
            Pseudo Genes (incomplete)         :: 43 of 85
            Pseudo Genes (internal stop)      :: 21 of 85
            Pseudo Genes (multiple problems)  :: 13 of 85
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
            REFSEQ INFORMATION: The reference sequence is identical to
            CP080453.1.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2178
                     /organism="Acinetobacter baumannii"
                     /mol_type="genomic DNA"
                     /strain="MRSN 56"
                     /isolation_source="Hip"
                     /host="Homo sapiens"
                     /db_xref="taxon:470"
                     /plasmid="pMRSN56-1"
                     /geo_loc_name="USA"
                     /collection_date="2010-06"
     gene            join(1758..2178,1..761)
                     /locus_tag="FBMFHHBO_RS19355"
                     /old_locus_tag="FBMFHHBO_19355"
     CDS             join(1758..2178,1..761)
                     /locus_tag="FBMFHHBO_RS19355"
                     /old_locus_tag="FBMFHHBO_19355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003115284.1"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006260 - DNA replication [Evidence IEA]"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein rep"
                     /protein_id="WP_003115284.1"
                     /translation="MNLFYGENPSSASSKSIQNSQSLGIYTKSPAILTPQGFQRVHDYL
                     LQDQSRKLLPKERVSNCRRLRIDKMKPRTVMYNENRCKAHFGNVQICGSIWSCPICAKH
                     ITEQRRTELRTGLDRWKTGRNGSVYLLTLTFSHSHGQSLRILLEGQKKAYKRFFEGRKV
                     VAIFKKLGVEYKIKGQEVTYGQNGWHPHNHVLLLATHHDLRFESYISELAEQWISACIK
                     SGLNAPSMQHGLDLRNGYYADQYVAKWGIENELTKGHIKKGRNGSYTPFDLLQLSTSDE
                     IVHGRSSGKLFQEFALAMKGARQLVWARGLKALLEIEDKSDEELAEETDKTSITLTPVE
                     DLVFSLLCTYQKRHEYLEAITRDYENGCFGNGEAENLINDLVQTEIRRLENAY"
                     /name="protein rep"
     gene            751..996
                     /locus_tag="FBMFHHBO_RS19360"
                     /old_locus_tag="FBMFHHBO_19360"
     CDS             751..996
                     /locus_tag="FBMFHHBO_RS19360"
                     /old_locus_tag="FBMFHHBO_19360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003115283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WP_003115283.1"
                     /translation="MLIEKVILVSVEKSKQGYTAEVELETADGFSFSGPIEFDVNWNYD
                     LGFLNTFVNTDEDRIFIKEVLSSDDFKNDVLSSIVS"
                     /name="hypothetical protein"
ORIGIN
        1 aatccttaag gattttgcta gaaggccaga aaaaggctta caagcgattt ttcgaggggc
       61 gcaaagttgt agcaattttc aaaaaactag gtgtcgaata caaaattaag ggccaggaag
      121 ttacttacgg ccaaaatggt tggcatcctc ataatcatgt tcttttattg gcaactcacc
      181 acgatttacg ttttgagagt tatatctctg agttagctga acaatggatt tcagcttgta
      241 ttaaatcagg tcttaatgct ccttcgatgc agcatggttt ggatctccgt aacggatatt
      301 acgctgacca atatgttgca aagtggggaa ttgagaatga attaactaag ggtcacatta
      361 agaagggtcg caatggcagt tatacgccat ttgatctttt gcaattatct acttctgatg
      421 aaattgttca tggacgatct tcaggcaaac tttttcaaga atttgccctg gctatgaaag
      481 gtgctagaca acttgtttgg gcacgtggtc ttaaggcttt gcttgaaatt gaagataaat
      541 ctgatgaaga gttagctgaa gaaacagaca agacttcaat cactttaacc cctgttgagg
      601 atctcgtctt tagtctgctt tgcacatacc aaaaacgtca tgaatatctg gaggcaatta
      661 ctcgagatta tgaaaatgga tgttttggaa atggtgaagc agaaaattta ataaacgatt
      721 tggttcaaac agaaattagg agattagaaa atgcttattg agaaagtaat tttggtgagt
      781 gttgagaagt ctaaacaagg ttatacggct gaagttgaac tagaaacagc agatggtttt
      841 tccttttccg ggccgattga atttgatgtt aattggaact acgacttggg ttttttgaat
      901 accttcgtca atacagatga agatcgaata tttattaagg aagttctttc cagtgatgat
      961 tttaagaacg atgtcttaag ttctattgtt tcttaaattt tttagcccga tcccctcggg
     1021 cttttttttg cgtatacgca aaaaatcaac ttaggctaat catgcaccac tggtgcatat
     1081 caatttactc catgacgttt ggcgtgccgt gcacgcacat aacggcatgg agtaaattgt
     1141 tttatatcca ttttcagcct gaaaatgaaa agacagagcg ggtgtctacc cgcgaactga
     1201 cataaatcga ttaagagcct tctctccctg attacatgct ccctttagcc taagaacggg
     1261 agtaaccgag ctacgctcgc tgaaaacaag aaaattgatt tttactaaat acatataggt
     1321 ggaaatactc aataaaccca cttttttttt atgactaaat aataacaaca caggagagat
     1381 gatcatgttt gattacgatc taattaattt aattcttttt gttttaacaa cggtttacac
     1441 aattctgggg tactacaaaa aatgatattt aaacttattg aaaataatgc ggagcaaaga
     1501 cgaggagtga ggaggagggc acgcacgacc gacacgaccg aggaattggc ggagcattgt
     1561 atttaccact tatattttgc gtatatacaa catgttgtca tgaaaacttg tggtcttgct
     1621 tttctgattt tttcagtagt actatcaact tgcactaaag cttgtgcgaa agaccttgtt
     1681 caccgtacag gcaaaaaaaa tgggctgaca gtgctggaac acttcaaccc agtgatcaac
     1741 ataattaagg tatgtcgatg aatctatttt atggggaaaa tccgtcctca gcaagctcaa
     1801 agagcattca aaatagccag tctcttggta tatatacgaa atctcctgcc atccttacgc
     1861 cacaagggtt tcagcgggta catgattatt tactccagga tcaatctcga aagcttttac
     1921 ccaaagagcg agtttcgaat tgtagacgtt tgcgcattga taaaatgaag cctcgtacag
     1981 tgatgtataa cgagaatcgt tgtaaggctc attttggcaa tgttcagatt tgcggttcga
     2041 tttggtcatg tcctatttgt gcaaagcaca tcacggagca aagacgtact gaattaagaa
     2101 ctggcttgga taggtggaaa acaggccgta acggctccgt atatctcctt acgctcacat
     2161 ttagccattc gcatggtc
//
