LOCUS       NZ_CP079817             1657 bp    DNA     circular CON 10-JAN-2024
DEFINITION  Klebsiella pneumoniae subsp. pneumoniae strain WRC02_S465MC plasmid
            pS465MC_p10, complete sequence.
ACCESSION   NZ_CP079817
VERSION     NZ_CP079817.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN20115065
            Assembly: GCF_019334705.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae subsp. pneumoniae
  ORGANISM  Klebsiella pneumoniae subsp. pneumoniae
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Klebsiella/Raoultella group; Klebsiella.
REFERENCE   1  (bases 1 to 1657)
  AUTHORS   Balaji,V., Snehal,P., Yamuna,B.D. and Monisha,P.
  TITLE     Complete genome of Carbapenem resistant Klebsiella
            pneumoniae_WRC02_S465MC
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1657)
  AUTHORS   Balaji,V., Snehal,P., Yamuna,B.D. and Monisha,P.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-JUL-2021) Clinical Microbiology, Christian Medical
            College, Ida Scudder Road, Vellore, Tamil Nadu 632004, India
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Date                     :: 2021
            Assembly Method :: UNICYCLER v. V.0.4.8; CANU v. V.2.1.1
            Assembly Name                     :: WRC02_S465MC
            Genome Representation             :: Full
            Expected Final Version            :: Yes
            Genome Coverage                   :: 91.0x
            Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MinION
            ##Genome-Assembly-Data-END##
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Date                   :: 01/10/2024 03:44:13
            Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline
            (PGAP)
            Annotation Method :: Best-placed reference protein set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,688
            CDSs (total)                      :: 5,562
            Genes (coding)                    :: 5,417
            CDSs (with protein)               :: 5,417
            Genes (RNA)                       :: 126
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 87
            ncRNAs                            :: 14
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 61 of 145
            Pseudo Genes (incomplete)         :: 79 of 145
            Pseudo Genes (internal stop)      :: 24 of 145
            Pseudo Genes (multiple problems)  :: 17 of 145
            ##Genome-Annotation-Data-END##
            REFSEQ INFORMATION: The reference sequence is identical to
            CP079817.1.
            Bacteria and source DNA available from Christian medical college.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1657
                     /organism="Klebsiella pneumoniae subsp. pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="WRC02_S465MC"
                     /isolation_source="urine"
                     /host="Homo sapiens"
                     /sub_species="pneumoniae"
                     /db_xref="taxon:72407"
                     /plasmid="pS465MC_p10"
                     /geo_loc_name="India"
                     /lat_lon="12.9165 N 79.1325 E"
                     /collection_date="2014"
                     /collected_by="Christian medical college"
ORIGIN
        1 ctatttttcg gggatctgat tgccctctgg caatatcatt cagcacgcca tagtcggcat
       61 catggtccat tcgccagaaa accgaagcac cggcatcagc caggcgtgga gaaaactggt
      121 atcccagcag ccagaaaagg ccaaagacaa gttcgctggc acctgctgta tcggtcataa
      181 tttcggttgg attcagcccg gtctcctgtt ccagaagacc ttccagcaca aagatagagt
      241 ccctcagcgt ccccggtata acgatgccat gaaagccgga atactgatcg gacacaaagt
      301 tgtaccaggt gatccctctg ttattaccaa agtatttgcg gttcggtccg gcattgattg
      361 ttctgactgg cgtaacaaag cgcattccat ctgcagatgc cacttctcct ccaccccata
      421 tctgtgccag tggcagcgtt gcctgaaaat caaccagtct ggcattagcg ctggtgatag
      481 tttcagcccg cagatagttc gcttttgtcc agttcagccg gtgtcgggtc agtgcaggaa
      541 catttgatct gatcagtggt tccagaccga tattgcaggc ttcagccatc agcacggcgc
      601 tgatgctgac gggcagatca tcaactctgg cactggcttc actagcatgg aaaaactcat
      661 cagcaaatcc ggtatgggcg ttaatttcga gcagcaactc cgttaaatcc accggaggga
      721 gtagatcact gatcattttg ctcagtcgtt tcagactgtc cggctcatca agactggcga
      781 ggggagaaat tgtcaaccgg ggcttcgggc cagaaacatc gagttcgaca gcctcatttt
      841 cgcaaagacg tgcagcaacc tgtctgtaac gactatcaag ctgatgaccc agagatttta
      901 ttgcttcctg cgggtctgtc gggtgcccca aagaacgata aaccttaatc cggtttgcct
      961 gccagtcagc accctgtagt aatcttgcac gaggatctcc ccaccggtta ctgccggtaa
     1021 cgtagacatc cctccgcctc agactatcct gcagtttact gagaaagcag agcgtgtatc
     1081 ccctgcgggt gatatgtttt tccttgttaa tcaccagccg tttccatgac cgactgataa
     1141 tttccgttgg tgcgtcgtca aaaaactgcc gccgtgagct gaactcccgg ctgaggtagt
     1201 cacaggcatt cagagtggta accccggcag gtgcggatga aaatttaacg gtattcagca
     1261 gatggggcag gaaacgacga acgcgcccgt actgctccac catttcttca tgaaaattat
     1321 cgtctgaggg ccgggcaatt tcacggacaa gcgtgatgat ttcagccagc ttttgccttg
     1381 ggatgtagct gaacacctca gcacgaatcg attcgtccgg tgtttcttct ttcagcaggt
     1441 acgaacatgc gctggcgagc gccaatgcag atttatccag atccttcagc gagcggagcc
     1501 gttttttctg cccaatcttt ctggcgtcac ggatgataac ggccagcatg gcgtccagaa
     1561 cgtccaatgc atcatccagc gccagcgttt cccatgcaag gacaaaggca accagaaccg
     1621 ccatcctttt ctgcggtgac atcctggcaa tattgaa
//
