LOCUS       NZ_CP076015             2044 bp    DNA     circular CON 10-JAN-2024
DEFINITION  Klebsiella pneumoniae subsp. pneumoniae strain WGR351 plasmid
            p7WGR351, complete sequence.
ACCESSION   NZ_CP076015
VERSION     NZ_CP076015.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN18317431
            Assembly: GCF_018623335.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae subsp. pneumoniae
  ORGANISM  Klebsiella pneumoniae subsp. pneumoniae
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Klebsiella/Raoultella group; Klebsiella.
REFERENCE   1  (bases 1 to 2044)
  AUTHORS   Nicholas,L., Sunil,K., Mohammad,F., Prashant,J.R., Balaji,V. and
            Yamuna,B.D.
  TITLE     Complete genome of Klebsiella pneumoniae_WGR351
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2044)
  AUTHORS   Nicholas,L., Sunil,K., Mohammad,F., Prashant,J.R., Balaji,V. and
            Yamuna,B.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2021) Clinical Microbiology, Christian Medical
            College, Ida Scudder Road, Vellore, Tamil Nadu 632004, India
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Date                     :: 2021
            Assembly Method :: CANU v. v.1.7; UNICYCLER HYBRID v. v.0.4.6
            Assembly Name                     :: WGR351
            Genome Representation             :: Full
            Expected Final Version            :: Yes
            Genome Coverage                   :: 133.0x
            Sequencing Technology :: Illumina HiSeq; Oxford Nanopore MinION
            ##Genome-Assembly-Data-END##
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Date                   :: 01/10/2024 02:02:17
            Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline
            (PGAP)
            Annotation Method :: Best-placed reference protein set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,689
            CDSs (total)                      :: 5,565
            Genes (coding)                    :: 5,440
            CDSs (with protein)               :: 5,440
            Genes (RNA)                       :: 124
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 88
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 125
            CDSs (without protein)            :: 125
            Pseudo Genes (ambiguous residues) :: 0 of 125
            Pseudo Genes (frameshifted)       :: 46 of 125
            Pseudo Genes (incomplete)         :: 71 of 125
            Pseudo Genes (internal stop)      :: 22 of 125
            Pseudo Genes (multiple problems)  :: 12 of 125
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
            REFSEQ INFORMATION: The reference sequence is identical to
            CP076015.1.
            Bacteria and source DNA available from Wockhardt Research Centre.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2044
                     /organism="Klebsiella pneumoniae subsp. pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="WGR351"
                     /isolation_source="Pus"
                     /host="Homo sapiens"
                     /sub_species="pneumoniae"
                     /db_xref="taxon:72407"
                     /plasmid="p7WGR351"
                     /geo_loc_name="India"
                     /lat_lon="12.9165 N 79.1325 E"
                     /collection_date="2017"
                     /collected_by="Wockhardt Research Centre"
     gene            1305..1646
                     /locus_tag="J4H97_RS28265"
                     /old_locus_tag="J4H97_28265"
     CDS             1305..1646
                     /locus_tag="J4H97_RS28265"
                     /old_locus_tag="J4H97_28265"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WP_039819495.1"
                     /translation="MPLKGNGNKFINNGIGVHNEAQVSVELNDSTFENNKIGYLEGKLD
                     RIDELFKNETPELAKKELIEELSKAIKRGESEKAESIFEKFDFHKWIASGANIAKIVES
                     LASAMNIHS"
                     /name="hypothetical protein"
ORIGIN
        1 ctggcatcag gtttcggcct gaattcaaac ccaaccccaa aaaagagtat ctttcgcctt
       61 gcctaaaacg gtgaacgggc gggcaattta ttgcgtaact gtgagacctt gccggcgcag
      121 ccggaaaacc cgctgtcagc acgttcagga agggggtgat gtacaaatgg cacagaggat
      181 gaaactgacg taaaagtgac gtatgaactt aaggagtgat gtaaaaatga cgcaaaagtg
      241 acgtataagc tgaaggagag atgtaattct gtagtcttat accaggtgaa tgcctgtcca
      301 gcatcagctt ctgtagttta tctgtagtct catcttagct tttgtagtct atctgtagtc
      361 ggggaggata acccgttcat gcctgcatga acgatacagt gaggaacgct ttttttgtca
      421 cgatctcccc ttaacctgcg taaatcaccc gccatggttg attatttttc aacctcaaaa
      481 tggtcataca cctaacgcag ccgcgatttt catcgcaact gcatgaatta aaagaaaaaa
      541 aaggaaaatt ccgttttcac gagtaatacc caggtattaa aaatccactg taattacatg
      601 aaaataaaga aataaagagt aataccgggg tattactggc cacggataaa tttcggcatg
      661 ttcagggctg acttttgttg tttgttcacg ttcagactcc gtgtgacagt gcttatctca
      721 gcaaggcaga tatgacgctt cctcgcactg acagactccg ctagtcagta ctgcggcgag
      781 cgttgtcagc ttaggtttgg aaaggatggt tttgatgtag atgctttaaa tgtacaaaag
      841 ccccgtgaca gaatcacagg gcttcggtac tctaattctt gcagatacct gccaagatca
      901 gacgtagcaa tcaaatctta gcagggctgg ctagtcatgt cactaccagc ttaataccat
      961 tcaacgacat taaaatcata tctgcacctt agacgctcag gtctacgccc cggactccgg
     1021 caggataaac aggcaaattg gtgggaacgt aacttaaccg cgaaagagtt aggctctacc
     1081 ccgtctcgct gtacgataac aagcacctga taaaatgagc gacgaaggca gtagtaagcg
     1141 gtggcgtgtg attgcaagaa agtcgaacac gacacccaca caatcaagcc cttgcaaggt
     1201 gagacacaca agaaaagagc ttgacgaagg tcgctacgct ccccgtggtc ttatataccc
     1261 accacggggg cattaggcta actttaacca aaactggagg aactatgccg ctaaaaggta
     1321 atggaaataa attcattaac aacggtatcg gcgttcacaa cgaagcccaa gtcagtgtgg
     1381 agcttaatga ttctactttt gaaaataata aaatagggta cttagagggt aagctcgatc
     1441 gcatagatga actcttcaaa aatgaaacgc cggaactcgc taaaaaagag ttaatagaag
     1501 agcttagcaa ggctataaag cgtggggagt cagaaaaagc agagtctatt ttcgaaaaat
     1561 tcgactttca caagtggata gcctctggcg ctaacattgc aaagatcgtt gagtcgctag
     1621 cgtctgctat gaacattcat tcgtaacctt tgtaaatata ctcgaaccaa atacgccaca
     1681 atactcatat tgaaatgccc gtcaggtaac tttgctttct gagcctgacg gatttcacga
     1741 tcgttgatat gcaggcccac tccacaatta atggcctcat taccagacat ataaacatca
     1801 gctgacgaat ctatactgta cccaatgccg cagctttcag ctgtgcaatt aattattgaa
     1861 atcatacccc cccccccaca ttgtctttct gaatttacca taacgtctca ttgcgcgcac
     1921 ccctcagacg ggctgtgcgc gattttcccg cctgaacctc aaaaccgcat gtcttacccc
     1981 ctgaaaacgg ctcagaatgg cgctgatgat ttctgaggct gtgaatcgtt atgcagccgg
     2041 ctgc
//
