LOCUS       NZ_CP064207             2462 bp    DNA     circular CON 29-NOV-2023
DEFINITION  Klebsiella pneumoniae strain JX-CR-hvKP-12 plasmid pJX12-2, complete
            sequence.
ACCESSION   NZ_CP064207
VERSION     NZ_CP064207.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN16561437
            Assembly: GCF_015355835.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Klebsiella/Raoultella group; Klebsiella.
REFERENCE   1  (bases 1 to 2462)
  AUTHORS   Liu,Y.
  TITLE     Prevalence of the NTEKPC-I on IncFrepB plasmids among Hypervirulent
            Klebsiella pneumoniae isolates in Jiangxi Province, South China
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2462)
  AUTHORS   Liu,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (28-OCT-2020) Department of Clinical Microbiology, First
            Affiliated Hospital of Nanchang University, Nanchang University,
            Yong wai zheng jie No. 17, Nanchang, Jiangxi 330006, China
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Method                   :: HGAP v. 3
            Genome Representation             :: Full
            Expected Final Version            :: Yes
            Genome Coverage                   :: 240x
            Sequencing Technology             :: PacBio RSII
            ##Genome-Assembly-Data-END##
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Date                   :: 11/29/2023 06:42:26
            Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline
            (PGAP)
            Annotation Method :: Best-placed reference protein set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,523
            CDSs (total)                      :: 5,398
            Genes (coding)                    :: 5,249
            CDSs (with protein)               :: 5,249
            Genes (RNA)                       :: 125
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 89
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 149
            CDSs (without protein)            :: 149
            Pseudo Genes (ambiguous residues) :: 0 of 149
            Pseudo Genes (frameshifted)       :: 69 of 149
            Pseudo Genes (incomplete)         :: 77 of 149
            Pseudo Genes (internal stop)      :: 38 of 149
            Pseudo Genes (multiple problems)  :: 33 of 149
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
            REFSEQ INFORMATION: The reference sequence is identical to
            CP064207.1.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2462
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="JX-CR-hvKP-12"
                     /isolation_source="blood"
                     /db_xref="taxon:573"
                     /plasmid="pJX12-2"
                     /geo_loc_name="China:Nanchang"
                     /collection_date="2018/2019"
     gene            730..813
                     /locus_tag="IS504_RS27880"
     CDS             730..813
                     /locus_tag="IS504_RS27880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007772075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WP_058652899.1"
                     /translation="MHEPPVQSDRCALSGNYRLESNPDRHD"
                     /name="hypothetical protein"
     gene            complement(1359..1901)
                     /locus_tag="IS504_RS27515"
     CDS             complement(1359..1901)
                     /locus_tag="IS504_RS27515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001632013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WP_001696621.1"
                     /translation="MNIDEVAKWRPFTDQDGNIWDLSFLDAHEVSYTHCSPGKPDIVYK
                     FTVSYSFHCFCKDYPEQTEEEKLSLMYDAGKDSRPFCKVRYALARDKLRAIIEGLGNAK
                     VIHAGYGSYAFVEITVDEGESEFYFVPFKVYRERKKLRLHVTSAYPVKERPSGKPVSFF
                     KIAHNLLRGKPLPKPHM"
                     /name="hypothetical protein"
     Typing          352..839
                     /name="ColRNAI_rep_cluster_1987"
                     /typing="replicon"
                     /tool="MOB-suite"
                     /identity="92.073"
                     /coverage="95.0"
                     /evalue="0.0"
ORIGIN
        1 aagggagagg tagcattttg atagcaaaaa agtagcaaaa ggatagcaac cgaaagacca
       61 gaagactctg gagatagcaa aaaagtagca aaatggtagc aaaaagatag caaaaagata
      121 gcaaacatgc gggagctaac caggagtctt tagcgggccg gcggtactcc aaaaacacat
      181 cttgtcccgc tgttttgtga ataagccagc atagctgtgg gcacaaaaca tttcctgtcc
      241 gctgctttaa cctttgtaat ccaggaacgt caggtgacgt cactttgcgg cgttcgccct
      301 atcctgcatc gtattaaaaa atgcagctat ggcgcgtacg gtgccaaaga gaagcccgca
      361 gatattccgc ttcctcgctc actgactcgc tccgctcggt cgttcggctg cggcgagcgt
      421 tacctgcaca cggataagga caaaggcata cggcgtgaca ggcagggcag gaaaaggatg
      481 cggcgctgcc gtttttccat aggctccgcc cccctgacaa gcatcacgaa atctgacgct
      541 caaatcagtg gtggcgaaac ccgacaggac tataaagata ccaggcgttt ccccctggtg
      601 gctccctcgt gcgctctcct gttcctgcct ttcggtttac cggtgtcatt ccgctgttat
      661 ggccgcgttt atctcattcc acgcctgaca ctcagttccg ggtaggcagt tcgctccaag
      721 ctggactgta tgcacgaacc ccccgttcag tccgaccgct gcgccttgtc cggtaactat
      781 cgtcttgagt ccaacccgga tagacacgac taatcgccat tggcaacggc cactggtaag
      841 caggatgtgc gagagatgta acgagagttc ttgaagtggc ggcctaactg aggctacact
      901 gaaaggacag tatttggtga catgtctcgc acaagactgt taccacggtt agagaatctg
      961 ccaggattaa ctaaccttcg gaaaaaccac ctgccagggt ggttttttcg tttctgagca
     1021 agagactacg acgagccact gatgatctca agtgttcatt tctgatatcc acagcagaat
     1081 aactgttagg atatagggta tctatagtca ggagcttcaa gaaagccaga cacagcaatg
     1141 gattccggca ttatcgagaa aaattagtat ataggttgca accaaaatgt tggttgcaaa
     1201 tctacatcac actacctaca attgctttaa ggatgcagca gactggtaac accagacatc
     1261 ccactaccaa taacaatgtt ggtcgaggcc aagcccggta aaggtgttct gaataccaga
     1321 agaaatttct ggcgaagccc gcaactaagc gggctttgtt acatatgagg tttaggtaat
     1381 ggcttcccgc gcaggagatt gtgagctatc ttgaaaaagc taactggctt acctgacggt
     1441 ctctccttga caggataagc acttgttaca tgcaagcgca gctttttacg ctcacgatat
     1501 accttaaaag gcacaaagta gaactcactt tcaccttcat ctacagtaat ctctacaaaa
     1561 gcataactac catatccagc atggataacc ttcgcgttac ccaatccttc aatgatggct
     1621 ctcagcttgt ctcgagcaag ggcatatcgg accttacaaa atggcctcga gtctttgcct
     1681 gcatcataca tcaacgataa tttttcttcc tcagtctgct ctggataatc cttgcaaaaa
     1741 caatgaaatg agtaagaaac agtgaactta tacacaatat caggtttacc aggagaacaa
     1801 tgagtataag aaacctcatg tgcatcaaga aatgacagat cccatatatt gccatcctga
     1861 tccgtaaaag gacgccactt agcaacttca tcaatgttca cgaaaaaacc tcaatatccg
     1921 gatggcagaa tccgcacatt ctaccagaga agaaacaagc ggaaggagcg tggcaaaata
     1981 agagctaggc cttttacaga agacttcgcc acaacctttc atggatacat tggtaatgat
     2041 taagtgttat ttaccataac atccgttgcg tgcaccgccg cagaggccct cagcgcgttt
     2101 ctgaggcctc cgacctgaaa cacacacctt tctgtgccca tatcgagaaa aaacgcccct
     2161 gatgattctg gcgcgactgc atggctatgc acggacatac ctggccggga ttttagcggc
     2221 taaaatccga tgaacgccct gaaagccacc acgaaccacc ccgataacgc ctcacgggtg
     2281 cgcagtttac tgtgcggccg tgaggcgttg gccaggccgt caggcatggc tggatttatt
     2341 gctaaggggg tcggatttaa cgtggatgaa tcagcacgca gtgatgaacg ggattcggaa
     2401 ggggcaccct tgcggcgcgg cgatgtatac atcgctaacg tgccttggtc atttattgca
     2461 ag
//
