LOCUS       NZ_CP061654             2450 bp    DNA     circular CON 04-SEP-2023
DEFINITION  Acinetobacter seifertii strain AS34 plasmid pAS34-4, complete
            sequence.
ACCESSION   NZ_CP061654
VERSION     NZ_CP061654.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN16092222
            Assembly: GCF_014722275.1
KEYWORDS    RefSeq.
SOURCE      Acinetobacter seifertii
  ORGANISM  Acinetobacter seifertii
            Bacteria; Pseudomonadota; Gammaproteobacteria; Moraxellales;
            Moraxellaceae; Acinetobacter; Acinetobacter calcoaceticus/baumannii
            complex.
REFERENCE   1  (bases 1 to 2450)
  AUTHORS   Li,L.-H., Yang,Y.-S., Sun,J.-R., Huang,T.-W., Huang,W.-C.,
            Wang,Y.-C., Kuo,T.-H., Kuo,S.-C. and Chen,T.-L.
  TITLE     Clinical and molecular characterization of Acinetobacter seifertii
            in Taiwan
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2450)
  AUTHORS   Chen,F.-J. and Lee,Y.-T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-SEP-2020) Department of Emergency Medicine, Taipei
            Veterans General Hospital, No.201, Section 2, Shipai Road, Taipei
            112, Taiwan
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Date                     :: 2020
            Assembly Method                   :: CCBGpipe v. 1
            Genome Representation             :: Full
            Expected Final Version            :: Yes
            Genome Coverage                   :: 80x
            Sequencing Technology             :: Oxford Nanopore MinION
            ##Genome-Assembly-Data-END##
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Date                   :: 09/03/2023 22:19:01
            Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline
            (PGAP)
            Annotation Method :: Best-placed reference protein set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,241
            CDSs (total)                      :: 4,144
            Genes (coding)                    :: 3,703
            CDSs (with protein)               :: 3,703
            Genes (RNA)                       :: 97
            rRNAs                             :: 6, 6, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 6, 6 (5S, 16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 441
            CDSs (without protein)            :: 441
            Pseudo Genes (ambiguous residues) :: 0 of 441
            Pseudo Genes (frameshifted)       :: 376 of 441
            Pseudo Genes (incomplete)         :: 63 of 441
            Pseudo Genes (internal stop)      :: 23 of 441
            Pseudo Genes (multiple problems)  :: 18 of 441
            ##Genome-Annotation-Data-END##
            REFSEQ INFORMATION: The reference sequence is identical to
            CP061654.1.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2450
                     /organism="Acinetobacter seifertii"
                     /mol_type="genomic DNA"
                     /strain="AS34"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:1530123"
                     /plasmid="pAS34-4"
                     /geo_loc_name="Taiwan"
                     /collection_date="2010/2017"
                     /collected_by="TVGH"
     gene            join(2228..2450,1..747)
                     /locus_tag="IC775_RS20925"
                     /old_locus_tag="IC775_20915"
                     /pseudo=""
     CDS             join(2228..2450,1..747)
                     /locus_tag="IC775_RS20925"
                     /old_locus_tag="IC775_20915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002342725.1"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA];
                     GO:0003916 - DNA topoisomerase activity [Evidence IEA]"
                     /GO_process="GO:0006270 - DNA replication initiation
                     [Evidence IEA]"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo=""
                     /codon_start=1
                     /transl_table=11
                     /product="replication initiation factor domain-containing
                     protein"
                     /name="replication initiation factor domain-containing
                     protein"
ORIGIN
        1 ttctggttat ttaaagtcgg taggacgaaa tggatggcag ttagttgacc agtttggtga
       61 gaatattgct tatattgaat tacttcagtt tcaagaaggg aaagcacgaa ttgattttaa
      121 ccccaacaaa atcaatcaat tttagcgggt tcgatgaaga atttcattca tgatttgttt
      181 ttagagccac acttttcgcg tgcggatatt gcttgcgata ttcttggggt acctgatgag
      241 tttattacgc aatatcgaat agtagatcct gtgtctttta aaccgattta tggacgaaat
      301 ggcaaattag agacagccta ttggggcagc cgtgccagcg aacggcaagt acgactatac
      361 aacaaaaagt tggaacagga acggaaaaag aaaattgtgc cgaaagaaat tgaaacttgg
      421 tggcgtttag aaatgcaatt acggcgtggg aaagcaacag attggcatgc gatggttcag
      481 gaaagtttgg atagttttgc aagtccacat tttttgcctg ctgatataaa acatactgac
      541 agaattatga ttgcaggatt gacttcagat caaaacttat gggctggatt gacgagacca
      601 acaaaatata aatatcggaa tttgttgaag caagaaagtc aaaatgatga gctgacgaat
      661 catttacgag aaacattttc agaatcggct gacaaactga aagaggaatt agatacatgg
      721 ttacgaggtc ttgatgtaac cgagtaaatc agttgagcaa aacaatgtct ctttttataa
      781 tcaatttagg ggatatccca gtatcactct ccgagggtga ctcaggggaa ggagtccctt
      841 aaatctaaaa tcaatggcaa gtggacgaaa gatcgtccac tttttttatt cgaatgtcac
      901 gacagggaga tagtggtgtg cgcacacacc cgatgcttgc ccaataatat aacaatcgag
      961 aagggggaaa aatttcgaaa aggaaaaagt tttaactaaa atttagaatc ggtttgtttg
     1021 gaattgattt tttcgtttat caataaattt ttgggagtta gaatttttaa aagagatagt
     1081 tgcattgggg attggggcag cgccccaaag aagaaaaaat ccagctgaaa taagcgacaa
     1141 ttaaaatact attttagttg ttgctttgtg tgcagatgga tttttttagg catgtgggaa
     1201 cccacatgcg atgctcgcaa caaagcattt taagagaggg gctatttttg cggttgatta
     1261 ggaataaaaa attttttgaa caaaaatggg cttgtcgatt ttttgttttg cttttttgat
     1321 ttgttttttt gaggcaatgt caaaaaaagg aatcgaatca tgaaataaac gaaccaacaa
     1381 acgaaaaagt ttgtggcaaa aaaatgaaag agtgtgaatc aaaactttca aacagaaatt
     1441 tatttttcga aaaaaagtgt gtcttttgat aacaaaattg gttgtttagg gagagagctg
     1501 tgtctgtcct tcaggagagg ataagaagac ttcctgaacg gcaatagaaa caaatacaag
     1561 cacgagaaac gaagataagg tgcagtccat ggtaaatcga gctagaaggt cttagagagc
     1621 ctgtgaaggc ttcttagagc ttctgagagg ctttaaggaa tggacggcta gaaacaagtc
     1681 cccacgctct tgcatgcccc aaccccattg ttggggacgc ccacgagtgg cgaacggtag
     1741 aaggtccagg aaatcatttc ctggtgggtt tgggcaacgc ccaaggtttt ttatgtacaa
     1801 gaatggagaa aggccttaaa acgcttctga ggacgtttta aggcctttct ctttgacttg
     1861 gatagattaa cctttggcaa gaacgctgga agacgttctc aaagtgatta tagcaagttt
     1921 tagcgtatat aaaaatcttt tgagtgaaat ttgcctgagt ggtataatca agaaaaactg
     1981 agaaaagagc aaaaaaatag ccgaacggtg gtggtacacc aatcgactaa ttacggaaac
     2041 tacccaacta gctccgtaac tcaaattcat tatacgaata tttttaggtt tcttcaagac
     2101 tagagatttt tggttataga attttaagag ttacgtgaac tctggaaatt ctatccgaag
     2161 gtctcttttt cgtctggagg aaaaaatatg acaaataaaa atgaattgag tgaaatggga
     2221 acaaaatttg gggtcgagac ccacaaaaag aacgacgata aatgagtggg aaaaacttaa
     2281 ccgcatttct aacaggcggt taagtgtaaa aacttttaca cccccttaaa attaaattgg
     2341 tcaatcgacc gaattaccat tgttggaaaa ctgcgggaaa acatactcta ttacacagat
     2401 tttggtggga ttttggtcga ttttgagcag ttaatgcggt tgaatgagga
//
