LOCUS       NZ_CP058865             2148 bp    DNA     circular CON 03-APR-2024
DEFINITION  Klebsiella quasipneumoniae strain STLEFF_28 plasmid unnamed6,
            complete sequence.
ACCESSION   NZ_CP058865
VERSION     NZ_CP058865.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN13925557
            Assembly: GCF_022494055.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella quasipneumoniae
  ORGANISM  Klebsiella quasipneumoniae
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Klebsiella/Raoultella group; Klebsiella.
REFERENCE   1  (bases 1 to 2148)
  AUTHORS   Che,Y.
  TITLE     Complete genomes of MDR isolates collected from Hong Kong wastewater
            treatment plants
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2148)
  AUTHORS   Che,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (06-JUL-2020) Civil Engineering, The University of Hong
            Kong, Pokfulam Road, Hong Kong 000000, China
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Method                   :: SPAdes v. Unicycler 0.4.8
            Genome Representation             :: Full
            Expected Final Version            :: Yes
            Genome Coverage                   :: 200x
            Sequencing Technology :: Illumina; Oxford Nanopore GridION
            ##Genome-Assembly-Data-END##
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_022494055.1-RS_2024_04_03
            Annotation Date                   :: 04/03/2024 06:17:45
            Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline
            (PGAP)
            Annotation Method :: Best-placed reference protein set; GeneMarkS-2+
            Annotation Software revision      :: 6.7
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,561
            CDSs (total)                      :: 5,438
            Genes (coding)                    :: 5,267
            CDSs (with protein)               :: 5,267
            Genes (RNA)                       :: 123
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 86
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 171
            CDSs (without protein)            :: 171
            Pseudo Genes (ambiguous residues) :: 0 of 171
            Pseudo Genes (frameshifted)       :: 61 of 171
            Pseudo Genes (incomplete)         :: 115 of 171
            Pseudo Genes (internal stop)      :: 35 of 171
            Pseudo Genes (multiple problems)  :: 31 of 171
            ##Genome-Annotation-Data-END##
            REFSEQ INFORMATION: The reference sequence is identical to
            CP058865.1.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2148
                     /organism="Klebsiella quasipneumoniae"
                     /mol_type="genomic DNA"
                     /strain="STLEFF_28"
                     /isolation_source="Stanley WWTPs_28 WWTPs effluent"
                     /host="WWTPs effluent"
                     /db_xref="taxon:1463165"
                     /plasmid="unnamed6"
                     /geo_loc_name="Hong Kong"
                     /lat_lon="22.2 N 114.2 E"
                     /collection_date="2018-12"
     gene            complement(31..492)
                     /locus_tag="HZT23_RS27730"
                     /old_locus_tag="HZT23_27605"
     CDS             complement(31..492)
                     /locus_tag="HZT23_RS27730"
                     /old_locus_tag="HZT23_27605"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WP_239592484.1"
                     /translation="MKKKLLAALILLTSTNAMALNQWVTDNKNGNPMVISEQGKFLITV
                     AYSSSNFENIYLYPLYEDNACKSNNYRPKQAKSAKFNGVLVQLADACMNGAHYFYPITD
                     QGINFVINQFFNSTSVYINQGDFSENISAQGFSRAMSTFRNMGNSTGGL"
                     /name="hypothetical protein"
     Typing          1074..1289
                     /name="MOB_unknown"
                     /typing="oriT"
                     /tool="MOB-suite"
                     /identity="88.073"
                     /coverage="100.0"
                     /evalue="3.41e-66"
ORIGIN
        1 gcacgcaatg aggcgttatg gtaaatatgc ttatagcccc ccagtactat tccccatgtt
       61 tctgaaagtg ctcattgctc ttgagaaccc ttgcgcacta atgttttcgc tgaaatctcc
      121 ctggtttatg taaactgatg ttgagttaaa aaactgattt atgacgaagt tgataccttg
      181 gtctgttatg gggtagaagt aatgagctcc gttcatacag gcatcagcta gttgaactaa
      241 tacaccgtta aattttgcag atttagcttg ttttggtctg taattatttg atttgcaagc
      301 attatcctca tacagagggt ataaatatat gttctcaaaa ttacttgatg agtaagctac
      361 tgtgataagg aatttgcctt gttcactaat caccattgga tttccgttct tgttatccgt
      421 aacccattgg ttgagagcca ttgcgttggt tgaggttagg aggataagag ctgcgagtag
      481 ttttttcttc atgttttctt aacgtccagt gtctttacct tagtgtattt tagcaaataa
      541 atacctaatg cccccgtggt gggtatataa aaatcacggg gagcgtcgcg accttcgtcc
      601 agctcgtttc ttgtttctct tgccgtgcaa atggcttgat tgtgtgggtg aagtgtcaga
      661 ccttaccaat cacacttcac cgcttaccgc tgccttgttc gctcatttta tcaggtgcca
      721 gttatcgtac tgcgagacgg ggtagagctt aactctttcg cggttaagtt acgtttccac
      781 cgtttgcctg tttatcctgc cggagtccgg ggcgtagacc tgagcgtcta aggtgcagat
      841 atgcgtttaa tgtcgttgaa tggtattaag ctggtagtga caaggctagc cagccctgct
      901 aggatttgat tgtgacgtct gatcctggca ggtatctgca agaattagag tactcaagcc
      961 ccgtgattct gtcacggggc ttttgtactt cttgagcctg aaaatttcat tatccctcag
     1021 ttatatcccc gcaacgcccg ccggagcctc acggcaggag cgcagcgacc gagtgagcga
     1081 ggaggcgtca gttcatcgtt tccagcattt tgcacttacg cccacatgcc gcatttttca
     1141 cctgccacat gaatcatttc cctgaattac cacttcgaat taccatatta agccagtata
     1201 cactccgcta gcgctacgtg actggttcag ggctgcgccc cgaaacccgc taacaacctc
     1261 tctgctactg gatatcaccc catgccatct gaatatgatg aacaacgggg ttcgactgat
     1321 acgcagcttc ccggcgaata tgaccttttt gatttaatgg cgaaggttac tgaagagatc
     1381 ctgcatgccc ctgtggattc tgggccgcct gtcggccggg aagcgttata gctttttcgc
     1441 ttgcccgcgt acgtggtaat acgccggtat taccttttat ttctttattt tcatgtaatt
     1501 acagtgggtt tttaatacct gggtattact cgcgaaaacg aaacattact tttttttctt
     1561 ttaattcatg cagttgcgat gaaaatcgcg gctgcgttag gtgtatgacc atttaatggt
     1621 taaaaaatca tcatttttgg tagggcgctc tccgtaggtt aagggttatt tggctaaaga
     1681 gtgtcctgtt ctttgatggt catgcttgca tgtccatctg agcaaccaaa aactacagat
     1741 aaactacaaa aaacgttttg cattagtgat ggcagactac aaaaaaacta caagaaaact
     1801 acacataaac tacaaagtaa ctaccggatt acctcagatc cgttccctga accattcgta
     1861 catcgccccc cttcctgaac gtgctgaaaa cgggttttcc ggctgcgccg gcaacgcttc
     1921 acggccacgc aataaattgc gtccccgttc accgttttcg ggtaagaaga acatcggaaa
     1981 caggacttac cccggctgaa tggcgtgaat ttccgcgcta tgcacttgtg cgcatactca
     2041 tgcatgccgt aaaaacagag cctgcgcgtt tctggcgggt tttcggggag aagatggggc
     2101 tttttatggc tcaggccaca gaaacgccct cagagcctct caggcggt
//
