LOCUS       NZ_CP058117             1697 bp    DNA     circular CON 30-MAR-2024
DEFINITION  Klebsiella grimontii strain RHBSTW-00181 plasmid pRHBSTW-00181_6,
            complete sequence.
ACCESSION   NZ_CP058117
VERSION     NZ_CP058117.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN15148529
            Assembly: GCF_013624225.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella grimontii
  ORGANISM  Klebsiella grimontii
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Klebsiella/Raoultella group; Klebsiella.
REFERENCE   1  (bases 1 to 1697)
  AUTHORS   AbuOun,M., Jones,H., Stubberfield,E., Gilson,D., Shaw,L.P.,
            Hubbard,A.T.M., Chau,K.K., Sebra,R., Peto,T.E.A., Crook,D.W.,
            Read,D.S., Gweon,H.S., Walker,A.S., Stoesser,N., Smith,R.P.,
            Anjum,M.F. and On Behalf Of The Rehab,Consortium.
  TITLE     A genomic epidemiological study shows that prevalence of
            antimicrobial resistance in Enterobacterales is associated with the
            livestock host, as well as antimicrobial usage
  JOURNAL   Microb Genom 7 (10) (2021)
   PUBMED   34609275
REFERENCE   2  (bases 1 to 1697)
  AUTHORS   Shaw,L.P.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JUN-2020) Nuffield Department of Medicine, University
            of Oxford, John Radcliffe Hospital, Oxford OX3 9DU, United Kingdom
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Method                   :: Unicycler v. v0.4.7
            Assembly Name                     :: WTP1 T1-00181
            Genome Representation             :: Full
            Expected Final Version            :: Yes
            Genome Coverage                   :: 74.8231516532439x
            Sequencing Technology :: Hybrid: Illumina and OXFORD_NANOPORE
            ##Genome-Assembly-Data-END##
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_013624225.1-RS_2024_03_30
            Annotation Date                   :: 03/30/2024 05:09:37
            Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline
            (PGAP)
            Annotation Method :: Best-placed reference protein set; GeneMarkS-2+
            Annotation Software revision      :: 6.7
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,865
            CDSs (total)                      :: 5,749
            Genes (coding)                    :: 5,630
            CDSs (with protein)               :: 5,630
            Genes (RNA)                       :: 116
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 84
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 119
            CDSs (without protein)            :: 119
            Pseudo Genes (ambiguous residues) :: 0 of 119
            Pseudo Genes (frameshifted)       :: 54 of 119
            Pseudo Genes (incomplete)         :: 87 of 119
            Pseudo Genes (internal stop)      :: 30 of 119
            Pseudo Genes (multiple problems)  :: 42 of 119
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
            REFSEQ INFORMATION: The reference sequence is identical to
            CP058117.1.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1697
                     /organism="Klebsiella grimontii"
                     /mol_type="genomic DNA"
                     /strain="RHBSTW-00181"
                     /isolation_source="Freshwater sample from downstream of
                     wastewater treatment plant"
                     /db_xref="taxon:2058152"
                     /plasmid="pRHBSTW-00181_6"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2017"
     gene            complement(914..1114)
                     /locus_tag="HV112_RS29205"
                     /old_locus_tag="HV112_29210"
     CDS             complement(914..1114)
                     /locus_tag="HV112_RS29205"
                     /old_locus_tag="HV112_29210"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WP_073553799.1"
                     /translation="MLKKDDIILIKSYGNEKTKIFLRGVNEVLMIDASFEEVKFAINND
                     LQDLQDLQGMQAVSAPLKIVT"
                     /name="hypothetical protein"
ORIGIN
        1 cccggaatca aaaacatctc cttcacatga aattcagtaa cgctcgccgc agtactgact
       61 agcggagtct gtcagtgcga ggaagcgtca tatctacctt gctgagataa gcactgtcac
      121 acggagtctg aacgtgaaca aacaacaaaa gtcagtcatg aacatggcga aacttatacg
      181 tggccagtaa taccccggta ttactcttta tttctttcct ttcatgtaat tacagtggat
      241 tttaataccc gggtattact cgtgaaaacg aaatattcct tttttttctt ttaattcatg
      301 tagttgcgat gaaaatcgcg gctgcgttag gtgtatgacc atttaagggt taaaaaatca
      361 tcatttttgg tagggcgctc tccgtaggtt aagggttatt tggctaaaaa gcgtcctgtt
      421 ctttgatggt catgcttgca tgaccatctg agcaaccaaa aactacagat aaactacaaa
      481 aaacgttttg cattagtgat ggcagactac aagaaaacta cagataaact aaaaagtaac
      541 taccggatca cctcagatcc gttccctgaa ccattcgtac atcgaccccc ttcctgaacg
      601 tgctgaaaac gggttttccg gctgcgccgg caacgcctca cggccacgca ataaattgcg
      661 catccgttca ccgttatcgg ggtggttcgt ggtggctttc agggcgttca tcggatttta
      721 gccgctaaaa tcccggccag gtatgtccgt gcatagccat gcagtcgcgc cagaatcatc
      781 aggggcgttt tttctcgata tggtcacaga aaggtgtgtg tttcaggccg gaggcctcag
      841 aaacgccctg agggcctctc aggcggtgcg ggcaacggat gttatggtaa atgttgagtg
      901 ctcttactaa aaatcaggtt actattttta gcggtgcgct tactgcctgc attccctgaa
      961 gatcctgaag atcctgaagg tcattattga tagcaaactt tacctcttca aagctcgcat
     1021 caatcattag aacctcattc acaccccgta aaaatatttt tgttttttcg ttaccatatg
     1081 attttattag gataatatca tcttttttta gcatgatact ttcgttactt attgttttga
     1141 gatgaagcat cgtcatggtt ttttttgcat gtgcttgtta aggggattga gattattcct
     1201 aaatccttga gtttgtacat acaaaaaaaa caaaaaaaat cctaatgccc ccgtggtggg
     1261 tatataaaaa tcacggggag cgtagcgacc ttcgtctagc tcgtttcttg tgtgtctcac
     1321 cctgcaaaag gtttgattgt gtgggcgctg tgctgacgtc tgagaatcac actttgccgc
     1381 ttactgctgt cttattcgct cattttatca ggtgcttgtt atcgtacagc gagacggggt
     1441 agagcctaac tctttcgcgg ttaagttacg ttcccaccaa tttgcctgtt tatcctgccg
     1501 gagtccgggg cgtagacctg agcgtctaag gtgcagatat gattttaatg tcgttgaatg
     1561 gtattaagct ggtagtgaca tcgctagcca gccctgctag gatttagatt ctcacgtctg
     1621 atcctggcag gtatctgcga agaattagag taccgaagcc ctgtgattct gtcacggggc
     1681 ttttgtacat ttaaagg
//
