LOCUS       NZ_CP056765             1697 bp    DNA     circular CON 25-FEB-2024
DEFINITION  Klebsiella grimontii strain RHBSTW-00186 plasmid pRHBSTW-00186_6,
            complete sequence.
ACCESSION   NZ_CP056765
VERSION     NZ_CP056765.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN15148531
            Assembly: GCF_013744615.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella grimontii
  ORGANISM  Klebsiella grimontii
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Klebsiella/Raoultella group; Klebsiella.
REFERENCE   1  (bases 1 to 1697)
  AUTHORS   AbuOun,M., Jones,H., Stubberfield,E., Gilson,D., Shaw,L.P.,
            Hubbard,A.T.M., Chau,K.K., Sebra,R., Peto,T.E.A., Crook,D.W.,
            Read,D.S., Gweon,H.S., Walker,A.S., Stoesser,N., Smith,R.P.,
            Anjum,M.F. and On Behalf Of The Rehab,Consortium.
  TITLE     A genomic epidemiological study shows that prevalence of
            antimicrobial resistance in Enterobacterales is associated with the
            livestock host, as well as antimicrobial usage
  JOURNAL   Microb Genom 7 (10) (2021)
   PUBMED   34609275
REFERENCE   2  (bases 1 to 1697)
  AUTHORS   Shaw,L.P.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JUN-2020) Nuffield Department of Medicine, University
            of Oxford, John Radcliffe Hospital, Oxford OX3 9DU, United Kingdom
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Method                   :: Unicycler v. v0.4.7
            Assembly Name                     :: WTP1 T1-00186
            Genome Representation             :: Full
            Expected Final Version            :: Yes
            Genome Coverage                   :: 87.8987752265686x
            Sequencing Technology :: Hybrid: Illumina and OXFORD_NANOPORE
            ##Genome-Assembly-Data-END##
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Date                   :: 02/25/2024 08:32:06
            Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline
            (PGAP)
            Annotation Method :: Best-placed reference protein set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,791
            CDSs (total)                      :: 5,675
            Genes (coding)                    :: 5,556
            CDSs (with protein)               :: 5,556
            Genes (RNA)                       :: 116
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 84
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 119
            CDSs (without protein)            :: 119
            Pseudo Genes (ambiguous residues) :: 0 of 119
            Pseudo Genes (frameshifted)       :: 53 of 119
            Pseudo Genes (incomplete)         :: 88 of 119
            Pseudo Genes (internal stop)      :: 30 of 119
            Pseudo Genes (multiple problems)  :: 42 of 119
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
            REFSEQ INFORMATION: The reference sequence is identical to
            CP056765.1.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1697
                     /organism="Klebsiella grimontii"
                     /mol_type="genomic DNA"
                     /strain="RHBSTW-00186"
                     /isolation_source="Freshwater sample from downstream of
                     wastewater treatment plant"
                     /db_xref="taxon:2058152"
                     /plasmid="pRHBSTW-00186_6"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2017"
     gene            complement(858..1058)
                     /locus_tag="HV114_RS28830"
                     /old_locus_tag="HV114_28845"
     CDS             complement(858..1058)
                     /locus_tag="HV114_RS28830"
                     /old_locus_tag="HV114_28845"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WP_073553799.1"
                     /translation="MLKKDDIILIKSYGNEKTKIFLRGVNEVLMIDASFEEVKFAINND
                     LQDLQDLQGMQAVSAPLKIVT"
                     /name="hypothetical protein"
ORIGIN
        1 gactagcgga gtctgtcagt gcgaggaagc gtcatatcta ccttgctgag ataagcactg
       61 tcacacggag tctgaacgtg aacaaacaac aaaagtcagt catgaacatg gcgaaactta
      121 tacgtggcca gtaatacccc ggtattactc tttatttctt tcctttcatg taattacagt
      181 ggattttaat acccgggtat tactcgtgaa aacgaaatat tccttttttt tcttttaatt
      241 catgtagttg cgatgaaaat cgcggctgcg ttaggtgtat gaccatttaa gggttaaaaa
      301 atcatcattt ttggtagggc gctctccgta ggttaagggt tatttggcta aaaagcgtcc
      361 tgttctttga tggtcatgct tgcatgacca tctgagcaac caaaaactac agataaacta
      421 caaaaaacgt tttgcattag tgatggcaga ctacaagaaa actacagata aactaaaaag
      481 taactaccgg atcacctcag atccgttccc tgaaccattc gtacatcgac ccccttcctg
      541 aacgtgctga aaacgggttt tccggctgcg ccggcaacgc ctcacggcca cgcaataaat
      601 tgcgcatccg ttcaccgtta tcggggtggt tcgtggtggc tttcagggcg ttcatcggat
      661 tttagccgct aaaatcccgg ccaggtatgt ccgtgcatag ccatgcagtc gcgccagaat
      721 catcaggggc gttttttctc gatatggtca cagaaaggtg tgtgtttcag gccggaggcc
      781 tcagaaacgc cctgagggcc tctcaggcgg tgcgggcaac ggatgttatg gtaaatgttg
      841 agtgctctta ctaaaaatca ggttactatt tttagcggtg cgcttactgc ctgcattccc
      901 tgaagatcct gaagatcctg aaggtcatta ttgatagcaa actttacctc ttcaaagctc
      961 gcatcaatca ttagaacctc attcacaccc cgtaaaaata tttttgtttt ttcgttacca
     1021 tatgatttta ttaggataat atcatctttt tttagcatga tactttcgtt acttattgtt
     1081 ttgagatgaa gcatcgtcat ggtttttttt gcatgtgctt gttaagggga ttgagattat
     1141 tcctaaatcc ttgagtttgt acatacaaaa aaaacaaaaa aaatcctaat gcccccgtgg
     1201 tgggtatata aaaatcacgg ggagcgtagc gaccttcgtc tagctcgttt cttgtgtgtc
     1261 tcaccctgca aaaggtttga ttgtgtgggc gctgtgctga cgtctgagaa tcacactttg
     1321 ccgcttactg ctgtcttatt cgctcatttt atcaggtgct tgttatcgta cagcgagacg
     1381 gggtagagcc taactctttc gcggttaagt tacgttccca ccaatttgcc tgtttatcct
     1441 gccggagtcc ggggcgtaga cctgagcgtc taaggtgcag atatgatttt aatgtcgttg
     1501 aatggtatta agctggtagt gacatcgcta gccagccctg ctaggattta gattctcacg
     1561 tctgatcctg gcaggtatct gcgaagaatt agagtaccga agccctgtga ttctgtcacg
     1621 gggcttttgt acatttaaag gcccggaatc aaaaacatct ccttcacatg aaattcagta
     1681 acgctcgccg cagtact
//
