LOCUS       NZ_CP050431             2419 bp    DNA     circular CON 09-JAN-2024
DEFINITION  Acinetobacter baumannii strain PM194188 plasmid pPM194122_6,
            complete sequence.
ACCESSION   NZ_CP050431
VERSION     NZ_CP050431.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN14420255
            Assembly: GCF_012935105.1
KEYWORDS    RefSeq.
SOURCE      Acinetobacter baumannii
  ORGANISM  Acinetobacter baumannii
            Bacteria; Pseudomonadota; Gammaproteobacteria; Moraxellales;
            Moraxellaceae; Acinetobacter; Acinetobacter calcoaceticus/baumannii
            complex.
REFERENCE   1  (bases 1 to 2419)
  AUTHORS   Veeraraghavan,B., Vijayakumar,S., Mathur,P., Amala,A., Francis,L.
            and Kirubananthan,A.
  TITLE     Complete genome sequencing for A.baumanii
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2419)
  AUTHORS   Veeraraghavan,B., Vijayakumar,S., Mathur,P., Amala,A., Francis,L.
            and Kirubananthan,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-MAR-2020) Clinical Microbiology, Christian Medical
            College, Ida Scudder Road, Vellore 632004, India
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Method                   :: Canu v. 1.7; Unicycler v. 0.4.6
            Genome Representation             :: Full
            Expected Final Version            :: Yes
            Genome Coverage                   :: 157.1399209x
            Sequencing Technology :: Illumina HiSeq; Oxford Nanopore GridION
            ##Genome-Assembly-Data-END##
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Date                   :: 01/09/2024 04:12:13
            Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline
            (PGAP)
            Annotation Method :: Best-placed reference protein set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,121
            CDSs (total)                      :: 4,025
            Genes (coding)                    :: 3,881
            CDSs (with protein)               :: 3,881
            Genes (RNA)                       :: 96
            rRNAs                             :: 6, 6, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 6, 7 (5S, 16S, 23S)
            tRNAs                             :: 73
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 144
            CDSs (without protein)            :: 144
            Pseudo Genes (ambiguous residues) :: 0 of 144
            Pseudo Genes (frameshifted)       :: 38 of 144
            Pseudo Genes (incomplete)         :: 102 of 144
            Pseudo Genes (internal stop)      :: 17 of 144
            Pseudo Genes (multiple problems)  :: 10 of 144
            ##Genome-Annotation-Data-END##
            REFSEQ INFORMATION: The reference sequence is identical to
            CP050431.1.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2419
                     /organism="Acinetobacter baumannii"
                     /mol_type="genomic DNA"
                     /strain="PM194188"
                     /isolation_source="BAL"
                     /host="Homo sapiens"
                     /db_xref="taxon:470"
                     /plasmid="pPM194122_6"
                     /geo_loc_name="India"
                     /lat_lon="28.5659 N 77.2111 E"
                     /collection_date="2019"
                     /collected_by="AIIMS Jai Prakash Narayan Apex Trauma
                     Center"
     gene            1..2419
                     /locus_tag="HB368_RS20615"
                     /old_locus_tag="HB368_20615"
     rRNA            1..2419
                     /locus_tag="HB368_RS20615"
                     /old_locus_tag="HB368_20615"
                     /product="23S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF02541"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF02541"
                     /name="23S ribosomal RNA"
ORIGIN
        1 atgccttggc accaggaacc gatgaaggac gtgggaggcc acgatagtcc ccggggagtc
       61 gtcaaccagg ctttgatccg ggggtttccg aatggggaaa cccggcagtc gtcatgggct
      121 gtcacccact gctgaacaca taggcagtgt ggagggaacg cggggaagtg aaacatctca
      181 gtacccgcag gaagagaaaa caaccgtgat tccgggagta gtggcgagcg aaaccggatg
      241 aggccaaacc tcaagcgtgt gagacccggc aggggttgcg cttggggggt tgtgggatct
      301 ctctttcatg gtctgccggc catgaggcga gtcagaaacc gttgatgtag gcgaaggaca
      361 tgcgaaaggt ccggcgtaga gggtaagacc cccgtagtcg aaacgtcagc ggctcgtttg
      421 agagacaccc aagtagcacg gggcccgaga aatcccgtgt gaatctggcg ggaccacccg
      481 ctaagcctaa atattccctg gtgaccgata gcggatagta ccgtgaggga atggtgaaaa
      541 gtaccgcggg agcggagtga aatagtacct gaaaccgtgt gcctacaagc cgtgggagcg
      601 tcgggatgtg cttgcacatc ctcgtgactg cgtgcctttt gaagaatgag cctgcgagtt
      661 tgcggtgtgt tgcgaggtta acccgtgtgg ggcagccgta gcgaaagcga gtccgaacag
      721 ggcgtttcag tagcacgctc aagacccgaa gcggagtgat ctagccatgg gcaggttgaa
      781 gcggctgtaa gaggtcgtgg aggaccgaac ccaccagggt tgaaaacctg ggggatgacc
      841 tgtggttagg ggtgaaaggc caatcaaact ccgtgatagc tggttctccc cgaaatgcat
      901 ttaggtgcag cgtcgtgtgt ttcttgccgg aggtagagca ctggataggc gatgggccct
      961 accgggttac tgaccttagc caaactccga atgccggtaa gtgagagcgc ggcagtgaga
     1021 ctgtggggga taagctccat ggtcgagagg gaaacagccc agagcatcga ctaaggcccc
     1081 taagcgtacg ctaagtggga aaggatgtgg agtcgcacag acaaccagga ggttggctta
     1141 gaagcagcca cccttgaaag agtgcgtaat agctcactgg tctagtgatt ccgcgccgac
     1201 aatgtagcgg ggctcaagcg taccgccgaa gtcgtgtcat tgcagcatga gggccaacgc
     1261 ccgctgtgat gggtagggga gcgtcgtctg ccgggtgaag cagccgcgga agcgagttgt
     1321 ggacggttga cgagtgagaa tgcaggcatg agtagcgatt cacacgtgag aaacgtgtgc
     1381 gccgattgac caagggttcc tgggtcaagc tgatctgccc agggtaagtc gggacctaag
     1441 gcgaggccga caggcgtagt cgatggataa ccggttgata ttccggtacc cgctgtgaag
     1501 cgtcaaacat cgaggcgagc gatgctaagt ccgtgaagcc gccggctgcc ggtttaccgt
     1561 cagtcggagt ggtggagccg acgaaccaga cttgtagtag gtgagtgatg gggtgacgca
     1621 ggaaggtagt ccatcccggg cggtggttgt cccggggtaa gggtgtaggc cgtgcggtag
     1681 gtaaatccgt cgcacatcga ggctgagacc tgatgccgag ccgattgtgg tgaagtggat
     1741 gatcctatgc tgtcgagaaa agcctctagc gagtttcatg gcggcccgta ccctaaaccg
     1801 actcaggtgg tctggtagag aataccgagg cgttcgggtg aactatggtt aaggaactcg
     1861 gcaaaatgcc cccgtaactt cgggagaagg ggggccacac ctggtgagag cacttgctgc
     1921 ttgagctggg ggtggccgca gagaccagcg agaagcgact gtttactaaa aacacaggtc
     1981 cgtgcgaagc cgtaaggcga tgtatacgga ctgacgcctg cccggtgctg gaacgttaag
     2041 gggaccggtt agtcgagatt cgtctcggcg aagctgagaa cttaagcgcc agtaaacggc
     2101 ggtggtaact ataaccatcc taaggtagcg aaattccttg tcgggtaagt tccgacctgc
     2161 acgaatggcg taacgacttc tcgactgtct caaccatagg cccggtgaaa ttgcactacg
     2221 agtaaagatg ctcgtttcgc gcagcaggac ggaaagaccc cgggaccttt actacagttt
     2281 gatattggtg ttcggttcgg cttgtgtagg ataggtggga gactgtgaag ctcaagcgcc
     2341 agcttgggtg gagtcgtcgt tgaaatacca ctctggtcgt gctggatgtc taacctgggt
     2401 ccgtgatccg gatcaggga
//
