LOCUS       NZ_CP050399              359 bp    DNA     circular CON 09-JAN-2024
DEFINITION  Acinetobacter baumannii strain VB11737 plasmid pVB11737_8, complete
            sequence.
ACCESSION   NZ_CP050399
VERSION     NZ_CP050399.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN14410107
            Assembly: GCF_012934965.1
KEYWORDS    RefSeq.
SOURCE      Acinetobacter baumannii
  ORGANISM  Acinetobacter baumannii
            Bacteria; Pseudomonadota; Gammaproteobacteria; Moraxellales;
            Moraxellaceae; Acinetobacter; Acinetobacter calcoaceticus/baumannii
            complex.
REFERENCE   1  (bases 1 to 359)
  AUTHORS   Veeraraghavan,B., Vijayakumar,S., Amala,A., Francis,L. and
            Kirubananthan,A.
  TITLE     Complete genome sequencing for A.baumanii
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 359)
  AUTHORS   Veeraraghavan,B., Vijayakumar,S., Amala,A., Francis,L. and
            Kirubananthan,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-MAR-2020) Clinical Microbiology, Christian Medical
            College, Ida Scudder Road, Vellore 632004, India
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Method                   :: Canu v. 1.7; Unicycler v. 0.4.6
            Genome Representation             :: Full
            Expected Final Version            :: Yes
            Genome Coverage                   :: 72.7314339x
            Sequencing Technology :: Illumina HiSeq; Oxford Nanopore GridION
            ##Genome-Assembly-Data-END##
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Date                   :: 01/09/2024 03:27:11
            Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline
            (PGAP)
            Annotation Method :: Best-placed reference protein set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,929
            CDSs (total)                      :: 3,834
            Genes (coding)                    :: 3,754
            CDSs (with protein)               :: 3,754
            Genes (RNA)                       :: 95
            rRNAs                             :: 6, 6, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 6, 6 (5S, 16S, 23S)
            tRNAs                             :: 73
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 80
            CDSs (without protein)            :: 80
            Pseudo Genes (ambiguous residues) :: 0 of 80
            Pseudo Genes (frameshifted)       :: 19 of 80
            Pseudo Genes (incomplete)         :: 48 of 80
            Pseudo Genes (internal stop)      :: 20 of 80
            Pseudo Genes (multiple problems)  :: 7 of 80
            ##Genome-Annotation-Data-END##
            REFSEQ INFORMATION: The reference sequence is identical to
            CP050399.1.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..359
                     /organism="Acinetobacter baumannii"
                     /mol_type="genomic DNA"
                     /strain="VB11737"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:470"
                     /plasmid="pVB11737_8"
                     /geo_loc_name="India"
                     /lat_lon="12.9246 N 79.1348 E"
                     /collection_date="2019"
                     /collected_by="Christian Medical College"
     gene            <1..138
                     /locus_tag="HBM80_RS00555"
                     /old_locus_tag="HBM80_00555"
                     /pseudo=""
     CDS             <1..138
                     /locus_tag="HBM80_RS00555"
                     /old_locus_tag="HBM80_00555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000559578.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo=""
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /name="transposase"
ORIGIN
        1 agaaatgggc ttaggtattt tcatcaactt ccttacatag atgctctaaa gattaaaacg
       61 gaaatgatta ctgagattga ggatggtttt actgttgtgc ttaatgggca atattattgg
      121 ttgccaaaaa cacaataagt tgaagcactt aaaataatga tcagcgagtt agctgatcat
      181 tattattgag atttcagcag attattttag taattgtcac accgatcatt aatgaaatat
      241 taaaagacgc gctgaaaatt ctgagatagt agtatgtgag acctttatag agtagatttc
      301 catgtgttaa ttaagttatc accaccacct aaaaagtcac ctaatgaagc tttaaatgc
//
